Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021440 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D011714 1.1e-225 786.9 616 100.0
CSS0045736 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D011714 3.8e-130 469.5 673 71.8
CSS0014358 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D011714 3.5e-107 393.3 678 68.0
Actinidia05150 Actinidia chinensis HOM05D018228 ORTHO05D021078 2.0e-14 85.1 172 33.1
PSO832G3486 Papaver somniferum HOM05D000231 ORTHO05D000132 4.9e-08 63.9 195 28.2
Sabra11G0027800 Salix brachista HOM05D000231 ORTHO05D000132 4.9e-08 63.9 189 27.0
CSS0029889 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 6.3e-08 63.5 201 30.3
CSS0049137 Camellia sinensis var. sinensis HOM05D000231 ORTHO05D000132 6.3e-08 63.5 201 30.3
Dinv40464 Davidia involucrata HOM05D000231 ORTHO05D000132 6.3e-08 63.5 196 27.0
Cfa000336 Carpinus fangiana HOM05D000231 ORTHO05D000132 1.1e-07 62.8 200 24.5
Eucgr.A01768 Eucalyptus grandis HOM05D000231 ORTHO05D000132 1.1e-07 62.8 200 29.0
Rhsim08G0120700 Rhododendron simsii HOM05D030015 ORTHO05D000060 1.8e-07 62.0 176 29.0
Potri.004G032100 Populus trichocarpa HOM05D000231 ORTHO05D000132 2.4e-07 61.6 176 27.8
RcHm_v2.0_Chr5g0005771 Rosa chinensis HOM05D000231 ORTHO05D000132 2.4e-07 61.6 191 26.2
Ciclev10017833m.g Citrus clementina HOM05D000231 ORTHO05D000132 4.1e-07 60.8 181 30.9
Lalb_Chr20g0110061 Lupinus albus HOM05D000231 ORTHO05D011714 4.1e-07 60.8 82 42.7
COL.COLO4_31634 Corchorus olitorius HOM05D000231 ORTHO05D000132 9.2e-07 59.7 179 29.1
TAR624G0649 Trochodendron aralioides HOM05D000231 ORTHO05D000132 9.2e-07 59.7 211 26.5
TAR626G0142 Trochodendron aralioides HOM05D000231 ORTHO05D000132 9.2e-07 59.7 183 26.2
Lj1A739T16 Lonicera japonica HOM05D000231 ORTHO05D000132 1.2e-06 59.3 197 27.4
Nn1g06823 Nelumbo nucifera HOM05D000231 ORTHO05D000132 1.2e-06 59.3 204 27.0
Potri.011G040900 Populus trichocarpa HOM05D000231 ORTHO05D000132 1.2e-06 59.3 189 27.0
RcHm_v2.0_Chr2g0161291 Rosa chinensis HOM05D000231 ORTHO05D000132 1.2e-06 59.3 200 28.0
CANSAT64G2327 Cannabis sativa HOM05D000231 ORTHO05D000132 1.6e-06 58.9 196 27.0
CAN.G898.2 Capsicum annuum HOM05D000231 ORTHO05D000132 1.6e-06 58.9 205 28.3
ECA236G4096 Erigeron canadensis HOM05D000231 ORTHO05D011714 1.6e-06 58.9 146 30.8
QL05p080770 Quercus lobata HOM05D000231 ORTHO05D000132 1.6e-06 58.9 173 25.4
COL.COLO4_04511 Corchorus olitorius HOM05D000231 ORTHO05D000132 2.0e-06 58.5 190 26.8
FvH4_3g03720 Fragaria vesca HOM05D000231 ORTHO05D000132 2.7e-06 58.2 191 25.1
FAN25G0621 Fragaria x ananassa HOM05D000231 ORTHO05D000132 2.7e-06 58.2 180 26.7
Sabra04G0018300 Salix brachista HOM05D000231 ORTHO05D000132 2.7e-06 58.2 189 27.0
TWI38G2113 Tripterygium wilfordii HOM05D000231 ORTHO05D000132 2.7e-06 58.2 188 26.1
Duzib192G0055 Durio zibethinus HOM05D000231 ORTHO05D000132 4.5e-06 57.4 185 29.2
GSVIVG01000451001 Vitis vinifera HOM05D000231 ORTHO05D000132 4.5e-06 57.4 186 29.0
Duzib248G0900 Durio zibethinus HOM05D000231 ORTHO05D000132 5.9e-06 57.0 233 27.5
Actinidia24051 Actinidia chinensis HOM05D000231 ORTHO05D000132 7.8e-06 56.6 196 26.0


User provided reference genes

Program Settings