Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021411 Camellia sinensis var. sinensis HOM05D020954 ORTHO05D001891 1.4e-37 159.1 76 100.0
CSS0026187 Camellia sinensis var. sinensis HOM05D020954 ORTHO05D001891 1.4e-37 159.1 76 100.0
CSS0001700 Camellia sinensis var. sinensis HOM05D020954 ORTHO05D001891 3.3e-31 137.9 76 89.5
CSS0032166 Camellia sinensis var. sinensis HOM05D020954 ORTHO05D112774 1.5e-28 129.0 76 85.5
CSS0033053 Camellia sinensis var. sinensis HOM05D020954 ORTHO05D108908 1.5e-28 129.0 76 85.5
CSS0044764 Camellia sinensis var. sinensis HOM05D020954 ORTHO05D111941 1.5e-28 129.0 76 85.5
CSS0011993 Camellia sinensis var. sinensis HOM05D001931 ORTHO05D001891 1.7e-08 62.4 56 58.9
TAR626G1799 Trochodendron aralioides HOM05D001931 ORTHO05D001891 2.3e-08 62.0 31 80.6
CSS0006342 Camellia sinensis var. sinensis HOM05D001931 ORTHO05D001891 3.0e-08 61.6 27 96.3
TAR383G0069 Trochodendron aralioides HOM05D001931 ORTHO05D001891 1.5e-07 59.3 27 88.9
CSS0026409 Camellia sinensis var. sinensis HOM05D001931 ORTHO05D001891 1.9e-07 58.9 27 92.6
CSS0033628 Camellia sinensis var. sinensis HOM05D001931 ORTHO05D001891 1.9e-07 58.9 27 92.6
CSS0031829 Camellia sinensis var. sinensis HOM05D001931 ORTHO05D001891 3.3e-07 58.2 29 86.2
Duzib168G1594 Durio zibethinus HOM05D001931 ORTHO05D001891 4.3e-07 57.8 27 88.9
Thecc.09G159000 Theobroma cacao HOM05D001931 ORTHO05D001891 4.3e-07 57.8 27 88.9
Hund29124 Selenicereus undatus HOM05D001931 ORTHO05D001891 7.3e-07 57.0 28 82.1
Aqoxy7G03249 Aquilegia oxysepala HOM05D001931 ORTHO05D001891 9.6e-07 56.6 27 85.2
Ciclev10010074m.g Citrus clementina HOM05D001931 ORTHO05D001891 9.6e-07 56.6 27 85.2
Duzib187G0379 Durio zibethinus HOM05D001931 ORTHO05D001891 9.6e-07 56.6 27 85.2
FvH4_4g10230 Fragaria vesca HOM05D001931 ORTHO05D001891 9.6e-07 56.6 27 85.2
FAN07G1760 Fragaria x ananassa HOM05D001931 ORTHO05D001891 9.6e-07 56.6 27 85.2
FAN12G0794 Fragaria x ananassa HOM05D001931 ORTHO05D001891 9.6e-07 56.6 27 85.2
FAN12G3556 Fragaria x ananassa HOM05D001931 ORTHO05D001891 9.6e-07 56.6 27 85.2
FAN22G0567 Fragaria x ananassa HOM05D001931 ORTHO05D001891 9.6e-07 56.6 27 85.2
Prupe.1G098600 Prunus persica HOM05D001931 ORTHO05D001891 9.6e-07 56.6 27 85.2
Dinv41312 Davidia involucrata HOM05D001931 ORTHO05D001891 1.2e-06 56.2 27 85.2
RcHm_v2.0_Chr4g0405051 Rosa chinensis HOM05D001931 ORTHO05D001891 1.2e-06 56.2 27 85.2
Dinv42791 Davidia involucrata HOM05D001931 ORTHO05D001891 1.6e-06 55.8 28 78.6
Lj4g0007174 Lotus japonicus HOM05D001931 ORTHO05D001891 1.6e-06 55.8 27 85.2
Ah.14g084160 Amaranthus hybridus HOM05D001931 ORTHO05D001891 2.1e-06 55.5 27 81.5
arahy.Tifrunner.gnm1.ann1.U0VU98 Arachis hypogaea HOM05D001931 ORTHO05D001891 2.1e-06 55.5 27 81.5
Glyma.13G090900 Glycine max HOM05D001931 ORTHO05D001891 2.1e-06 55.5 27 85.2
Glyma.17G069400 Glycine max HOM05D001931 ORTHO05D001891 2.1e-06 55.5 27 85.2
Gohir.A08G093300 Gossypium hirsutum HOM05D001931 ORTHO05D001891 2.1e-06 55.5 27 81.5
Gohir.D08G097600 Gossypium hirsutum HOM05D001931 ORTHO05D001891 2.1e-06 55.5 27 81.5
Gorai.004G104700 Gossypium raimondii HOM05D001931 ORTHO05D001891 2.1e-06 55.5 27 81.5
Manes.14G163400 Manihot esculenta HOM05D001931 ORTHO05D001891 2.1e-06 55.5 27 81.5
Manes.14G163500 Manihot esculenta HOM05D001931 ORTHO05D001891 2.1e-06 55.5 27 81.5
CANSAT11G1179 Cannabis sativa HOM05D001931 ORTHO05D001891 2.8e-06 55.1 27 81.5
Dinv43310 Davidia involucrata HOM05D001931 ORTHO05D001891 2.8e-06 55.1 27 81.5
Hund29126 Selenicereus undatus HOM05D001931 ORTHO05D001891 2.8e-06 55.1 27 81.5
ClCG11G012640 Citrullus lanatus HOM05D001931 ORTHO05D001891 3.6e-06 54.7 27 81.5
MELO3C004105.2 Cucumis melo HOM05D001931 ORTHO05D001891 3.6e-06 54.7 27 81.5
Atru.chr7.456 Acer truncatum HOM05D001931 ORTHO05D001891 4.7e-06 54.3 27 81.5
CDE05G1260 Ceratophyllum demersum HOM05D001931 ORTHO05D001891 4.7e-06 54.3 27 77.8
Eucgr.C00220 Eucalyptus grandis HOM05D001931 ORTHO05D001891 4.7e-06 54.3 27 77.8
MD13G1274100 Malus domestica HOM05D001931 ORTHO05D001891 4.7e-06 54.3 27 77.8
MD16G1261200 Malus domestica HOM05D001931 ORTHO05D001891 4.7e-06 54.3 27 77.8
Nn8g40231 Nelumbo nucifera HOM05D001931 ORTHO05D001891 4.7e-06 54.3 27 81.5
Sc14g0001050 Simmondsia chinensis HOM05D001931 ORTHO05D001891 4.7e-06 54.3 27 77.8
arahy.Tifrunner.gnm1.ann1.Q5FMS0 Arachis hypogaea HOM05D001931 ORTHO05D001891 6.2e-06 53.9 27 81.5
Ca_21167_v3 Cicer arietinum L. HOM05D000842 ORTHO05D001891 6.2e-06 53.9 27 81.5
Cc06_g14120 Coffea canephora HOM05D001931 ORTHO05D001891 6.2e-06 53.9 27 77.8
HanXRQChr05g0163091 Helianthus annuus HOM05D001931 ORTHO05D001891 6.2e-06 53.9 36 66.7
Hma1.2p1_0325F.1_g126130 Hydrangea macrophylla HOM05D001931 ORTHO05D001891 6.2e-06 53.9 27 81.5
Lsat_1_v5_gn_6_104321 Lactuca sativa HOM05D001931 ORTHO05D001891 6.2e-06 53.9 36 66.7
MBI14_g37221_MAGBIO Magnolia biondii HOM05D001931 ORTHO05D001891 6.2e-06 53.9 27 81.5
MBI14_g47695_MAGBIO Magnolia biondii HOM05D001931 ORTHO05D001891 6.2e-06 53.9 27 81.5
Phvul.008G176600 Phaseolus vulgaris HOM05D001931 ORTHO05D001891 6.2e-06 53.9 27 77.8
Actinidia29598 Actinidia chinensis HOM05D001931 ORTHO05D001891 8.1e-06 53.5 46 54.3
Haze_21267 Corylus avellana HOM05D001931 ORTHO05D001891 8.1e-06 53.5 27 77.8
Lalb_Chr10g0102511 Lupinus albus HOM05D001931 ORTHO05D001891 8.1e-06 53.5 36 66.7
PGR142G2287 Punica granatum HOM05D001931 ORTHO05D001891 8.1e-06 53.5 27 77.8
SGA_v2.0_scaffold66G22520 Striga asiatica HOM05D004271 ORTHO05D006011 8.1e-06 53.5 41 58.5


User provided reference genes

Program Settings