Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021407 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 3.3e-110 401.7 205 100.0
CSS0007142 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 1.4e-105 386.3 200 98.0
CSS0043279 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 2.7e-104 382.1 200 96.5
CSS0033317 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 3.9e-103 378.3 200 95.5
CSS0011651 Camellia sinensis var. sinensis HOM05D002646 ORTHO05D002782 5.1e-95 351.3 200 90.0
Rhsim06G0032100 Rhododendron simsii HOM05D002646 ORTHO05D002782 2.5e-86 322.4 204 78.9
vmacro21650 Vaccinium macrocarpon HOM05D002646 ORTHO05D002782 5.6e-86 321.2 202 81.2
Actinidia15339 Actinidia chinensis HOM05D002646 ORTHO05D002782 9.9e-83 310.5 203 78.8
Dinv36096 Davidia involucrata HOM05D002646 ORTHO05D002782 7.9e-80 300.8 208 73.6
GSVIVG01009725001 Vitis vinifera HOM05D002646 ORTHO05D002782 3.6e-77 292.0 205 70.7
Manes.05G158200 Manihot esculenta HOM05D002646 ORTHO05D002782 6.2e-77 291.2 205 72.2
QL02p008978 Quercus lobata HOM05D002646 ORTHO05D002782 5.8e-75 284.6 200 72.5
Lj4A37G90 Lonicera japonica HOM05D002646 ORTHO05D002782 9.9e-75 283.9 201 70.6
TWI36G1083 Tripterygium wilfordii HOM05D002646 ORTHO05D002782 2.9e-74 282.3 200 72.0
TAR626G1064 Trochodendron aralioides HOM05D002646 ORTHO05D002782 1.9e-73 279.6 207 68.6
CiPaw.16G059900 Carya illinoinensis HOM05D002646 ORTHO05D002782 9.3e-73 277.3 191 73.8
Oeu063762.1 Olea europaea HOM05D002646 ORTHO05D002782 6.0e-72 274.6 206 68.4
Ciclev10000434m.g Citrus clementina HOM05D002646 ORTHO05D002782 1.0e-71 273.9 208 69.2
Atru.chr13.450 Acer truncatum HOM05D002646 ORTHO05D002782 4.3e-70 268.5 204 68.1
Oeu007022.1 Olea europaea HOM05D002646 ORTHO05D002782 9.6e-70 267.3 199 67.8
CANSAT25G1404 Cannabis sativa HOM05D002646 ORTHO05D002782 4.8e-69 265.0 204 66.7
Haze_17945 Corylus avellana HOM05D002646 ORTHO05D002782 1.4e-68 263.5 203 68.5
Cpa.g.sc33.173 Carica papaya HOM05D002646 ORTHO05D002782 4.0e-68 261.9 202 66.3
ClCG08G014890 Citrullus lanatus HOM05D002646 ORTHO05D002782 4.0e-68 261.9 204 65.2
MSTRG.25182 Avicennia marina HOM05D002646 ORTHO05D002782 6.9e-68 261.2 203 63.5
MELO3C010957.2 Cucumis melo HOM05D002646 ORTHO05D002782 1.5e-67 260.0 200 67.5
Cfa018170 Carpinus fangiana HOM05D002646 ORTHO05D002782 3.4e-67 258.8 200 67.0
Cc10_g02720 Coffea canephora HOM05D002646 ORTHO05D002782 5.8e-67 258.1 205 65.9
DCAR_019535 Daucus carota HOM05D002646 ORTHO05D002782 5.8e-67 258.1 197 65.0
SGA_v2.0_scaffold201G41411 Striga asiatica HOM05D002646 ORTHO05D002782 7.6e-67 257.7 202 65.3
Migut.C00748 Erythranthe guttata HOM05D002646 ORTHO05D002782 1.3e-66 256.9 200 67.5
MBI17_g36957_MAGBIO Magnolia biondii HOM05D002646 ORTHO05D002782 1.7e-66 256.5 200 65.5
Sabra05G0176100 Salix brachista HOM05D002646 ORTHO05D002782 2.2e-66 256.1 206 63.1
Eucgr.F01577 Eucalyptus grandis HOM05D002646 ORTHO05D002782 2.9e-66 255.8 192 64.6
FAN02G0761 Fragaria x ananassa HOM05D002646 ORTHO05D002782 2.9e-66 255.8 200 66.5
Sed0008809 Sechium edule HOM05D002646 ORTHO05D002782 2.9e-66 255.8 200 64.0
Sc02g0005990 Simmondsia chinensis HOM05D002646 ORTHO05D002782 3.8e-66 255.4 200 64.5
Thecc.08G028900 Theobroma cacao HOM05D002646 ORTHO05D002782 4.9e-66 255.0 205 65.4
CAN.G424.59 Capsicum annuum HOM05D002646 ORTHO05D002782 8.4e-66 254.2 200 64.5
FAN14G1091 Fragaria x ananassa HOM05D002646 ORTHO05D002782 1.1e-65 253.8 200 66.5
Potri.005G228200 Populus trichocarpa HOM05D002646 ORTHO05D002782 1.1e-65 253.8 206 62.6
Prupe.6G124500 Prunus persica HOM05D002646 ORTHO05D002782 1.1e-65 253.8 200 65.0
FvH4_6g24430 Fragaria vesca HOM05D002646 ORTHO05D002782 1.9e-65 253.1 200 66.0
COL.COLO4_26294 Corchorus olitorius HOM05D002646 ORTHO05D002782 3.2e-65 252.3 205 62.0
Peaxi162Scf00345g00113 Petunia axillaris HOM05D002646 ORTHO05D002782 3.2e-65 252.3 204 63.7
CsaV3_2G028870 Cucumis sativus L. HOM05D002646 ORTHO05D002782 5.5e-65 251.5 204 64.7
Peaxi162Scf00258g00024 Petunia axillaris HOM05D002646 ORTHO05D002782 9.3e-65 250.8 204 63.2
FAN09G1605 Fragaria x ananassa HOM05D002646 ORTHO05D002782 1.2e-64 250.4 200 65.0
RcHm_v2.0_Chr7g0207751 Rosa chinensis HOM05D002646 ORTHO05D002782 1.2e-64 250.4 200 66.5
unitig_46.g18436 Utricularia gibba HOM05D002509 ORTHO05D002758 2.1e-64 249.6 206 60.7
MBI16_g07737_MAGBIO Magnolia biondii HOM05D002646 ORTHO05D002782 2.7e-64 249.2 200 63.5
Gohir.D06G005550 Gossypium hirsutum HOM05D002646 ORTHO05D002782 3.5e-64 248.8 200 62.5
MD03G1139500 Malus domestica HOM05D002646 ORTHO05D002782 3.5e-64 248.8 200 63.5
Nitab4.5_0000017g0180 Nicotiana tabacum HOM05D002646 ORTHO05D002782 3.5e-64 248.8 200 63.0
Nitab4.5_0004768g0020 Nicotiana tabacum HOM05D002646 ORTHO05D002782 3.5e-64 248.8 200 63.0
FAN05G0303 Fragaria x ananassa HOM05D002646 ORTHO05D002782 6.0e-64 248.1 200 65.5
Lalb_Chr14g0369361 Lupinus albus HOM05D002646 ORTHO05D002782 7.9e-64 247.7 201 63.7
PGR083G1089 Punica granatum HOM05D002646 ORTHO05D002782 7.9e-64 247.7 209 61.7
Lsat_1_v5_gn_5_28001 Lactuca sativa HOM05D002646 ORTHO05D002782 1.3e-63 246.9 204 61.8
Gorai.010G009700 Gossypium raimondii HOM05D002646 ORTHO05D002782 3.0e-63 245.7 200 62.0
Lj5g0008895 Lotus japonicus HOM05D002646 ORTHO05D002782 3.0e-63 245.7 205 62.0
HanXRQChr03g0069631 Helianthus annuus HOM05D002646 ORTHO05D002782 3.9e-63 245.4 200 61.0
Medtr1g022355 Medicago truncatula HOM05D002646 ORTHO05D002782 3.9e-63 245.4 200 64.5
Gohir.A06G009600 Gossypium hirsutum HOM05D002646 ORTHO05D002782 8.7e-63 244.2 200 62.0
Nn7g35815 Nelumbo nucifera HOM05D002646 ORTHO05D002782 8.7e-63 244.2 204 63.2
ECA246G2606 Erigeron canadensis HOM05D002646 ORTHO05D002782 1.9e-62 243.0 206 60.7
Peaxi162Scf00303g00042 Petunia axillaris HOM05D002646 ORTHO05D002782 1.9e-62 243.0 204 62.7
Psat6g008080 Pisum sativum HOM05D002646 ORTHO05D002782 1.3e-61 240.4 206 62.1
Sopen07g013020 Solanum pennellii HOM05D002646 ORTHO05D002782 2.8e-61 239.2 200 60.0
Sopen07g013050 Solanum pennellii HOM05D002646 ORTHO05D002782 2.8e-61 239.2 200 60.0
Ca_13365_v3 Cicer arietinum L. HOM05D002646 ORTHO05D002782 4.8e-61 238.4 213 62.4
Duzib041G0261 Durio zibethinus HOM05D002646 ORTHO05D002782 8.2e-61 237.7 201 63.7
TPR.G20158 Trifolium pratense HOM05D002646 ORTHO05D002782 1.4e-60 236.9 204 61.3
arahy.Tifrunner.gnm1.ann1.GFJ2Z4 Arachis hypogaea HOM05D002646 ORTHO05D002782 3.1e-60 235.7 204 62.3
arahy.Tifrunner.gnm1.ann1.RWN5MT Arachis hypogaea HOM05D002646 ORTHO05D002782 3.1e-60 235.7 204 62.3
Solyc07g025210.2 Solanum lycopersicum HOM05D002646 ORTHO05D002782 3.1e-60 235.7 203 57.6
VMungo0647G1092 Vigna mungo HOM05D002646 ORTHO05D002782 1.5e-59 233.4 205 60.5
Phvul.001G013700 Phaseolus vulgaris HOM05D002646 ORTHO05D002782 4.5e-59 231.9 202 61.9
PGSC0003DMG400005374 Solanum tuberosum HOM05D002646 ORTHO05D002782 1.0e-58 230.7 201 59.2
Aqoxy2G03652 Aquilegia oxysepala HOM05D002646 ORTHO05D002782 6.5e-58 228.0 206 58.7
MD11G1162300 Malus domestica HOM05D002646 ORTHO05D002782 1.1e-57 227.3 223 55.6
THA.LOC104813824 Tarenaya hassleriana HOM05D002646 ORTHO05D002782 1.4e-57 226.9 190 61.1
Glyma.17G251300 Glycine max HOM05D002646 ORTHO05D002782 2.5e-57 226.1 205 60.0
Glyma.14G073700 Glycine max HOM05D002646 ORTHO05D002782 3.2e-57 225.7 207 57.5
Thhalv10006936m.g Eutrema salsugineum HOM05D002646 ORTHO05D002782 4.6e-56 221.9 200 57.5
PSO675G2317 Papaver somniferum HOM05D002646 ORTHO05D002782 3.0e-55 219.2 201 53.7
PSO017G2345 Papaver somniferum HOM05D002646 ORTHO05D002782 1.1e-54 217.2 201 53.2
AT1G19520 Arabidopsis thaliana HOM05D002646 ORTHO05D002782 1.5e-54 216.9 202 56.4
Carub.0001s1909 Capsella rubella HOM05D002646 ORTHO05D002782 1.9e-54 216.5 202 56.9
CARHR020090 Cardamine hirsuta HOM05D002646 ORTHO05D002782 4.3e-54 215.3 201 57.2
A06p15700 Brassica napus HOM05D002646 ORTHO05D002782 2.8e-53 212.6 202 56.9
SHI08146 Sapria himalayana HOM05D002646 ORTHO05D002782 4.8e-53 211.8 208 55.8
AL1G32270 Arabidopsis lyrata HOM05D002646 ORTHO05D002782 1.4e-52 210.3 199 55.8
BcaC05g25840 Brassica carinata HOM05D002646 ORTHO05D002782 3.1e-52 209.1 203 55.2
C05p18020 Brassica napus HOM05D002646 ORTHO05D002782 3.1e-52 209.1 203 55.7
BolC5t30509H Brassica oleracea HOM05D002646 ORTHO05D002782 3.1e-52 209.1 203 55.2
Sp1g17390 Schrenkiella parvula HOM05D002646 ORTHO05D002782 6.9e-52 208.0 192 56.2
CDE05G0187 Ceratophyllum demersum HOM05D002646 ORTHO05D002782 1.5e-51 206.8 198 53.0
CDE11G1167 Ceratophyllum demersum HOM05D002646 ORTHO05D002782 1.5e-51 206.8 188 56.4
Ah.10g033130 Amaranthus hybridus HOM05D002646 ORTHO05D002782 5.9e-51 204.9 208 51.9
Aa31LG7G4170 Aethionema arabicum HOM05D002646 ORTHO05D002782 1.3e-50 203.8 200 54.0
ATR0568G218 Amborella trichopoda HOM05D002646 ORTHO05D002782 2.5e-49 199.5 206 53.4
BraA06t24679Z Brassica rapa HOM05D002646 ORTHO05D002782 2.5e-49 199.5 200 52.0
Hund06823 Selenicereus undatus HOM05D002646 ORTHO05D002782 2.7e-48 196.1 188 52.7
EL10Ac4g08951 Beta vulgaris HOM05D002646 ORTHO05D002782 3.6e-48 195.7 196 54.6
BcaB07g31981 Brassica carinata HOM05D002646 ORTHO05D002782 1.8e-47 193.4 202 52.0
AUR62025546 Chenopodium quinoa HOM05D002646 ORTHO05D002782 6.7e-47 191.4 191 55.5
Os02g0611400 Oryza sativa ssp. japonica HOM05D002646 ORTHO05D002782 3.0e-39 166.0 201 44.8
Potri.002G034900 Populus trichocarpa HOM05D002646 ORTHO05D002782 6.3e-37 158.3 197 47.2
Zm00001eb246850 Zea mays HOM05D002646 ORTHO05D002782 9.1e-36 154.5 201 42.3
BcaB01g03834 Brassica carinata HOM05D002646 ORTHO05D002782 5.5e-33 145.2 153 50.3
AUR62043098 Chenopodium quinoa HOM05D002646 ORTHO05D002782 8.0e-32 141.4 188 42.6
SEGI_28365 Sequoiadendron giganteum HOM05D002646 ORTHO05D002782 4.5e-27 125.6 200 35.5
BcaB08g36374 Brassica carinata HOM05D002646 ORTHO05D002782 6.5e-26 121.7 93 60.2
HPP92_021825 Vanilla planifolia HOM05D002646 ORTHO05D002782 1.6e-16 90.5 201 30.8
Sabra02G0028000 Salix brachista HOM05D002646 ORTHO05D002782 8.0e-16 88.2 125 44.8
ATR0568G064 Amborella trichopoda HOM05D002646 ORTHO05D002782 3.8e-10 69.3 128 39.1
ATR0697G028 Amborella trichopoda HOM05D002646 ORTHO05D002782 8.0e-08 61.6 108 31.5


User provided reference genes

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