Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 1.2e-188 662.9 311 100.0
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 2.5e-178 628.6 311 94.2
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 4.4e-175 617.8 307 93.5
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 7.0e-173 610.5 312 91.3
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 1.6e-172 609.4 313 91.7
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 2.7e-172 608.6 311 89.7
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 3.5e-172 608.2 311 90.0
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 6.0e-172 607.4 308 91.6
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 7.8e-172 607.1 307 89.9
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.0e-171 606.7 311 89.7
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 1.7e-171 605.9 311 89.4
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 1.7e-171 605.9 308 89.9
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 1.7e-171 605.9 307 89.9
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 1.5e-170 602.8 308 89.3
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 1.9e-170 602.4 305 90.8
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 2.1e-169 599.0 305 90.2
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 8.0e-169 597.0 313 88.8
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 8.0e-169 597.0 311 88.1
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 8.0e-169 597.0 308 90.6
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 4.0e-168 594.7 311 87.1
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 5.2e-168 594.3 311 87.8
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 6.8e-168 594.0 311 89.1
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 8.9e-168 593.6 311 87.8
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 2.6e-167 592.0 305 89.8
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 4.4e-167 591.3 311 86.5
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 5.8e-167 590.9 305 89.2
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 7.5e-167 590.5 305 89.8
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 2.4e-165 585.5 306 89.5
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 3.5e-164 581.6 305 87.9
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 4.6e-164 581.3 308 87.0
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 4.6e-164 581.3 308 88.0
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 7.8e-164 580.5 308 88.0
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 1.3e-163 579.7 312 86.5
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 5.1e-163 577.8 304 88.2
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 2.5e-162 575.5 308 87.7
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 3.3e-162 575.1 308 87.0
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 1.2e-161 573.2 311 86.5
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 6.2e-161 570.9 308 86.4
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 6.2e-161 570.9 305 85.9
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 8.1e-161 570.5 311 86.2
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 1.8e-160 569.3 311 86.5
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 6.8e-160 567.4 317 81.7
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 8.9e-160 567.0 308 85.1
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 2.6e-159 565.5 311 86.2
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 4.4e-159 564.7 304 83.2
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 5.8e-159 564.3 303 84.5
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 2.2e-158 562.4 305 87.2
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 1.4e-157 559.7 314 81.2
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 2.4e-157 558.9 314 81.2
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 5.4e-157 557.8 303 83.2
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 6.0e-156 554.3 317 82.0
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 3.9e-155 551.6 309 82.5
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 5.1e-155 551.2 309 82.2
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 5.1e-155 551.2 308 85.4
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 6.6e-155 550.8 311 83.9
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 6.6e-155 550.8 306 81.7
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 8.6e-155 550.4 309 82.2
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 8.6e-155 550.4 309 82.2
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 8.6e-155 550.4 309 82.2
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 5.6e-154 547.7 311 83.6
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 5.6e-154 547.7 306 81.4
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 1.2e-153 546.6 304 81.6
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 6.2e-153 544.3 293 86.7
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 1.4e-152 543.1 301 84.4
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 1.3e-150 536.6 308 81.5
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 2.9e-150 535.4 311 82.3
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 7.1e-149 530.8 364 71.2
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 7.8e-148 527.3 271 90.4
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 3.9e-147 525.0 407 66.3
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 9.6e-146 520.4 280 85.4
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 2.4e-144 515.8 308 77.3
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 4.4e-143 511.5 263 90.9
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 1.1e-138 496.9 293 80.2
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 2.7e-132 475.7 303 74.6
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 2.3e-131 472.6 327 70.0
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 8.1e-129 464.2 261 82.8
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 4.0e-128 461.8 305 73.1
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 1.0e-123 447.2 308 70.1
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 1.0e-123 447.2 302 65.9
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 5.1e-123 444.9 254 81.5
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 1.9e-117 426.4 341 63.3
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 5.9e-103 378.3 311 63.3
Nitab4.5_0009876g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 1.6e-100 370.2 188 89.9
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 2.1e-100 369.8 269 69.5
Lsat_1_v5_gn_4_18721 Lactuca sativa HOM05D005968 ORTHO05D007158 1.0e-91 340.9 179 86.6
Oeu038140.1 Olea europaea HOM05D005968 ORTHO05D007158 1.4e-91 340.5 165 92.1
RcHm_v2.0_Chr2g0085611 Rosa chinensis HOM05D005968 ORTHO05D007158 1.8e-91 340.1 168 90.5
GSVIVG01023606001 Vitis vinifera HOM05D005968 ORTHO05D007158 3.9e-91 339.0 168 90.5
Lalb_Chr12g0198711 Lupinus albus HOM05D005968 ORTHO05D007158 2.6e-90 336.3 168 89.9
Cc06_g14950 Coffea canephora HOM05D005968 ORTHO05D007158 1.3e-89 334.0 168 91.1
FAN28G0447 Fragaria x ananassa HOM05D005968 ORTHO05D007158 2.2e-89 333.2 168 89.3
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 3.7e-89 332.4 186 84.9
TPR.G24830 Trifolium pratense HOM05D005968 ORTHO05D007158 8.2e-89 331.3 168 88.7
MSTRG.26272 Avicennia marina HOM05D005968 ORTHO05D007158 2.4e-88 329.7 165 90.3
CAN.G160.61 Capsicum annuum HOM05D005968 ORTHO05D007158 3.1e-88 329.3 168 88.7
Cpa.g.sc46.157 Carica papaya HOM05D005968 ORTHO05D007158 3.1e-88 329.3 163 89.6
Medtr4g130830 Medicago truncatula HOM05D005968 ORTHO05D007158 3.5e-87 325.9 168 88.7
Eucgr.C02540 Eucalyptus grandis HOM05D005968 ORTHO05D007158 4.5e-87 325.5 168 86.3
Sc17g0006690 Simmondsia chinensis HOM05D005968 ORTHO05D007158 1.5e-85 320.5 161 89.4
Sopen07g001720 Solanum pennellii HOM05D005968 ORTHO05D007158 1.9e-85 320.1 160 90.0
vmacro06082 Vaccinium macrocarpon HOM05D005968 ORTHO05D007158 2.6e-82 309.7 185 79.5
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 8.3e-81 304.7 248 56.0
Haze_19205 Corylus avellana HOM05D005968 ORTHO05D007158 1.2e-74 284.3 140 91.4
Dinv43246 Davidia involucrata HOM05D005968 ORTHO05D007158 1.2e-63 247.7 123 94.3
GSVIVG01023605001 Vitis vinifera HOM05D005968 ORTHO05D007158 1.6e-60 237.3 122 91.0
Cc06_g14960 Coffea canephora HOM05D005968 ORTHO05D007158 6.1e-60 235.3 122 91.0
TPR.G24874 Trifolium pratense HOM05D005968 ORTHO05D007158 8.0e-60 235.0 122 86.9
Lalb_Chr12g0198701 Lupinus albus HOM05D005968 ORTHO05D007158 1.4e-59 234.2 122 87.7
Sopen07g001730 Solanum pennellii HOM05D005968 ORTHO05D007158 2.3e-59 233.4 122 89.3
Solyc07g005620.2 Solanum lycopersicum HOM05D005968 ORTHO05D007158 5.2e-59 232.3 122 88.5
Medtr4g130840 Medicago truncatula HOM05D005968 ORTHO05D007158 8.9e-59 231.5 122 85.2
RhsimUnG0158300 Rhododendron simsii HOM05D005968 ORTHO05D001263 5.8e-58 228.8 122 83.6
Oeu038141.1 Olea europaea HOM05D005968 ORTHO05D007158 7.5e-58 228.4 122 86.1
RcHm_v2.0_Chr2g0085621 Rosa chinensis HOM05D005968 ORTHO05D007158 8.3e-57 224.9 123 85.4
ClCG06G012410 Citrullus lanatus HOM05D005968 ORTHO05D007158 2.3e-54 216.9 122 83.6
MELO3C010224.2 Cucumis melo HOM05D005968 ORTHO05D007158 2.3e-54 216.9 122 83.6
TAR636G1721 Trochodendron aralioides HOM05D005968 ORTHO05D007158 5.0e-54 215.7 110 88.2
Aa31LG2G19470 Aethionema arabicum HOM05D005968 ORTHO05D007158 8.1e-52 208.4 117 81.2
HPP92_004698 Vanilla planifolia HOM05D005968 ORTHO05D007158 1.4e-51 207.6 123 82.1
Os05g0279600 Oryza sativa ssp. japonica HOM05D005968 ORTHO05D007158 3.1e-51 206.5 124 75.8
Cpa.g.sc46.156 Carica papaya HOM05D005968 ORTHO05D007158 3.4e-50 203.0 142 71.1
HPP92_004697 Vanilla planifolia HOM05D005968 ORTHO05D007158 6.4e-49 198.7 101 85.1
arahy.Tifrunner.gnm1.ann1.4WLG0J Arachis hypogaea HOM05D005968 ORTHO05D007158 3.1e-35 153.3 243 39.9
CDE04G1812 Ceratophyllum demersum HOM05D005968 ORTHO05D007158 1.2e-34 151.4 89 75.3
arahy.Tifrunner.gnm1.ann1.HW7BNQ Arachis hypogaea HOM05D005968 ORTHO05D007158 3.8e-33 146.4 69 95.7
TAR636G0142 Trochodendron aralioides HOM05D002374 ORTHO05D003594 3.0e-30 136.7 71 87.3
Lsat_1_v5_gn_4_18741 Lactuca sativa HOM05D005968 ORTHO05D007158 8.7e-30 135.2 78 80.8
Nitab4.5_0006121g0010 Nicotiana tabacum HOM05D005968 ORTHO05D007158 8.1e-28 128.6 66 89.4
Eucgr.C02541 Eucalyptus grandis HOM05D005968 ORTHO05D007158 6.0e-23 112.5 71 77.5
SHI23672 Sapria himalayana HOM05D005968 ORTHO05D007158 4.5e-18 96.3 66 71.2
arahy.Tifrunner.gnm1.ann1.QXT71M Arachis hypogaea HOM05D005968 ORTHO05D007158 1.2e-15 88.2 46 89.1
arahy.Tifrunner.gnm1.ann1.VCSM30 Arachis hypogaea HOM05D005968 ORTHO05D007158 5.1e-14 82.8 47 80.9
arahy.Tifrunner.gnm1.ann1.HGKJ8P Arachis hypogaea HOM05D005968 ORTHO05D007158 3.1e-11 73.6 40 85.0
Haze_19213 Corylus avellana HOM05D000344 ORTHO05D005296 4.0e-11 73.2 34 91.2
Oeu038782.2 Olea europaea HOM05D005968 ORTHO05D007158 1.3e-09 68.2 46 71.7


User provided reference genes

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