Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021359 Camellia sinensis var. sinensis HOM05D006625 ORTHO05D008060 1.4e-51 206.1 106 100.0
CSS0023168 Camellia sinensis var. sinensis HOM05D006625 ORTHO05D008060 7.5e-26 120.6 93 68.8
Actinidia19797 Actinidia chinensis HOM05D006625 ORTHO05D008060 4.0e-19 98.2 95 54.7
Dinv40271 Davidia involucrata HOM05D006625 ORTHO05D008060 3.2e-16 88.6 91 52.7
Rhsim05G0143100 Rhododendron simsii HOM05D006625 ORTHO05D008060 6.0e-15 84.3 91 48.4
Hma1.2p1_0617F.1_g190230 Hydrangea macrophylla HOM05D006625 ORTHO05D008060 6.6e-14 80.9 92 48.9
Hma1.2p1_0617F.1_g190240 Hydrangea macrophylla HOM05D006625 ORTHO05D008060 6.6e-14 80.9 92 48.9
Lj5A1T20 Lonicera japonica HOM05D006625 ORTHO05D008060 2.5e-13 79.0 157 39.5
Ciclev10002145m.g Citrus clementina HOM05D006625 ORTHO05D008060 3.3e-13 78.6 91 46.2
vmacro19631 Vaccinium macrocarpon HOM05D006625 ORTHO05D008060 1.2e-12 76.6 91 48.4
Lj5A1T18 Lonicera japonica HOM05D006625 ORTHO05D008060 6.2e-12 74.3 158 38.0
Lj5A11T17 Lonicera japonica HOM05D006625 ORTHO05D008060 8.1e-12 73.9 158 38.0
Nitab4.5_0005388g0010 Nicotiana tabacum HOM05D006625 ORTHO05D008060 3.1e-11 72.0 123 39.8
PGSC0003DMG400028585 Solanum tuberosum HOM05D006625 ORTHO05D008060 6.8e-11 70.9 123 39.0
Solyc01g098830.3 Solanum lycopersicum HOM05D006625 ORTHO05D008060 2.0e-10 69.3 123 39.0
Rhsim05G0144100 Rhododendron simsii HOM05D006625 ORTHO05D008060 2.6e-10 68.9 96 42.7
Sopen01g042370 Solanum pennellii HOM05D006625 ORTHO05D008060 2.6e-10 68.9 123 38.2
Nitab4.5_0002031g0060 Nicotiana tabacum HOM05D006625 ORTHO05D008060 3.4e-10 68.6 123 38.2
QL03p005837 Quercus lobata HOM05D006625 ORTHO05D008060 4.4e-10 68.2 87 43.7
Peaxi162Scf00037g00234 Petunia axillaris HOM05D006625 ORTHO05D008060 1.3e-09 66.6 95 44.2
CANSAT54G0428 Cannabis sativa HOM05D006625 ORTHO05D008060 6.4e-09 64.3 89 41.6
Oeu043355.5 Olea europaea HOM05D006625 ORTHO05D008060 2.4e-08 62.4 123 35.0
Ca_10103_v3 Cicer arietinum L. HOM05D006625 ORTHO05D008060 3.2e-08 62.0 89 39.3
Lj5A18T33 Lonicera japonica HOM05D006625 ORTHO05D008060 3.2e-08 62.0 95 41.1
Lj5A588T21 Lonicera japonica HOM05D006625 ORTHO05D008060 3.2e-08 62.0 96 41.7
CiPaw.07G016100 Carya illinoinensis HOM05D006625 ORTHO05D008060 4.1e-08 61.6 86 40.7
Sc16g0008430 Simmondsia chinensis HOM05D006625 ORTHO05D008060 9.2e-08 60.5 123 35.8
DCAR_029427 Daucus carota HOM05D006625 ORTHO05D008060 1.2e-07 60.1 93 40.9
Prupe.6G327800 Prunus persica HOM05D006625 ORTHO05D008060 1.2e-07 60.1 84 38.1
Lj5A10T21 Lonicera japonica HOM05D006625 ORTHO05D008060 1.6e-07 59.7 97 40.2
TPR.G6108 Trifolium pratense HOM05D006625 ORTHO05D008060 1.6e-07 59.7 89 39.3
GSVIVG01000035001 Vitis vinifera HOM05D006625 ORTHO05D008060 1.6e-07 59.7 91 44.0
Cc00_g15580 Coffea canephora HOM05D006625 ORTHO05D008060 2.1e-07 59.3 119 37.8
Lj5A9T24 Lonicera japonica HOM05D006625 ORTHO05D008060 2.1e-07 59.3 97 40.2
Lj5g0018133 Lotus japonicus HOM05D006625 ORTHO05D008060 3.5e-07 58.5 123 34.1
Haze_04209 Corylus avellana HOM05D006625 ORTHO05D008060 4.6e-07 58.2 86 38.4
Glyma.20G232800 Glycine max HOM05D006625 ORTHO05D008060 4.6e-07 58.2 89 39.3
Medtr1g082740 Medicago truncatula HOM05D006625 ORTHO05D008060 4.6e-07 58.2 89 38.2
CiPaw.07G016300 Carya illinoinensis HOM05D006625 ORTHO05D008060 7.8e-07 57.4 82 39.0
Lj5A588T22 Lonicera japonica HOM05D006625 ORTHO05D008060 7.8e-07 57.4 96 40.6
Psat6g149480 Pisum sativum HOM05D006625 ORTHO05D008060 7.8e-07 57.4 89 38.2
Thecc.05G305300 Theobroma cacao HOM05D006625 ORTHO05D008060 1.0e-06 57.0 91 39.6
Manes.09G165400 Manihot esculenta HOM05D006625 ORTHO05D008060 1.7e-06 56.2 87 36.8
arahy.Tifrunner.gnm1.ann1.P1SK02 Arachis hypogaea HOM05D006625 ORTHO05D008060 3.9e-06 55.1 89 34.8
MSTRG.28006 Avicennia marina HOM05D006625 ORTHO05D008060 3.9e-06 55.1 119 32.8
AUR62005130 Chenopodium quinoa HOM05D006625 ORTHO05D008060 5.1e-06 54.7 119 34.5
Hund07059 Selenicereus undatus HOM05D006625 ORTHO05D008060 5.1e-06 54.7 94 35.1
Glyma.10G155500 Glycine max HOM05D006625 ORTHO05D008060 6.6e-06 54.3 89 37.1
arahy.Tifrunner.gnm1.ann1.A4Z4CH Arachis hypogaea HOM05D006625 ORTHO05D008060 8.6e-06 53.9 107 31.8
RcHm_v2.0_Chr3g0454381 Rosa chinensis HOM05D006625 ORTHO05D008060 8.6e-06 53.9 85 36.5


User provided reference genes

Program Settings