Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015368 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 7.6e-70 267.3 161 100.0
CSS0017473 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 7.6e-70 267.3 161 100.0
CSS0021320 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 7.6e-70 267.3 161 100.0
CSS0012008 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.2e-69 265.8 161 99.4
CSS0013580 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.2e-69 265.8 161 99.4
CSS0050513 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.9e-69 265.4 161 99.4
CSS0004257 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.8e-69 265.0 161 99.4
CSS0005302 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.1e-68 261.5 161 98.8
CSS0014799 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 4.1e-68 261.5 161 98.8
CSS0014280 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D024710 7.8e-67 257.3 161 87.6
CSS0023792 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.1e-63 246.9 161 94.4
CSS0038450 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.7e-51 205.7 107 99.1
CSS0010221 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D020238 6.1e-27 124.8 162 53.7
Rhsim07G0066400 Rhododendron simsii HOM05D001576 ORTHO05D000401 3.4e-22 109.0 160 48.1
RhsimUnG0111600 Rhododendron simsii HOM05D001576 ORTHO05D000401 3.4e-22 109.0 160 48.1
Rhsim12G0031800 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.7e-21 106.7 158 41.8
Rhsim05G0091700 Rhododendron simsii HOM05D001576 ORTHO05D000401 8.5e-21 104.4 158 41.8
Rhsim05G0092900 Rhododendron simsii HOM05D001576 ORTHO05D000401 8.5e-21 104.4 158 41.8
vmacro13746 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 1.4e-20 103.6 175 41.1
vmacro22863 Vaccinium macrocarpon HOM05D001576 ORTHO05D000401 1.4e-20 103.6 175 41.1
CSS0009093 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.0e-18 97.4 159 49.7
CSS0039293 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.0e-18 97.4 159 49.7
CSS0000195 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.4e-18 97.1 159 49.7
CSS0003077 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.4e-18 97.1 159 49.7
CSS0019281 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.4e-18 97.1 159 49.7
CSS0021750 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.4e-18 97.1 159 49.7
CSS0042573 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.4e-18 97.1 159 49.7
Hma1.2p1_0324F.1_g125640 Hydrangea macrophylla HOM05D001576 ORTHO05D000401 3.0e-18 95.9 153 38.6
CSS0006274 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 3.9e-18 95.5 159 49.7
Rhsim04G0125600 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.5e-17 93.6 158 39.9
CSS0042927 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.8e-16 89.4 160 48.8
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 4.8e-16 88.6 166 40.4
CSS0004495 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 2.4e-15 86.3 159 44.7
SHI25538 Sapria himalayana HOM05D002460 ORTHO05D002716 1.2e-14 84.0 160 39.4
CSS0010831 Camellia sinensis var. sinensis HOM05D001576 ORTHO05D000401 1.5e-14 83.6 128 57.0
Ciclev10003979m.g Citrus clementina HOM05D001576 ORTHO05D000401 2.9e-13 79.3 159 41.5
Ciclev10033751m.g Citrus clementina HOM05D001576 ORTHO05D000401 1.1e-12 77.4 138 37.7
Rhsim08G0180400 Rhododendron simsii HOM05D001576 ORTHO05D000401 2.5e-12 76.3 158 33.5
Rhsim07G0156400 Rhododendron simsii HOM05D001576 ORTHO05D000401 4.2e-12 75.5 154 37.7
TWI74G0871 Tripterygium wilfordii HOM05D025099 ORTHO05D000401 7.2e-12 74.7 165 47.3
Rhsim12G0091400 Rhododendron simsii HOM05D001576 ORTHO05D000401 1.2e-11 73.9 159 39.6
Haze_05842 Corylus avellana HOM05D001081 ORTHO05D003320 2.7e-11 72.8 157 36.9
Rhsim12G0116000 Rhododendron simsii HOM05D028291 ORTHO05D020238 2.7e-11 72.8 145 35.9
Ciclev10018206m.g Citrus clementina HOM05D001576 ORTHO05D000401 8.0e-11 71.2 159 44.0
TWI36G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 1.4e-10 70.5 158 35.4
QL02p009469 Quercus lobata HOM05D001576 ORTHO05D000401 3.9e-10 68.9 160 36.9
Haze_12994 Corylus avellana HOM05D001576 ORTHO05D000401 6.7e-10 68.2 146 45.2
TWI38G1366 Tripterygium wilfordii HOM05D025099 ORTHO05D000401 1.1e-09 67.4 158 40.5
TWI60G0823 Tripterygium wilfordii HOM05D001576 ORTHO05D010240 3.3e-09 65.9 158 34.8
TWI74G0405 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 5.7e-09 65.1 158 34.2
CiPaw.14G060500 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.4e-07 60.5 159 40.9
Haze_08540 Corylus avellana HOM05D058381 ORTHO05D020238 1.8e-07 60.1 157 38.9
TWI31G0938 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 2.4e-07 59.7 148 40.5
CiPaw.03G129800 Carya illinoinensis HOM05D001576 ORTHO05D000401 9.1e-07 57.8 156 41.0
Rhsim06G0075000 Rhododendron simsii HOM05D001576 ORTHO05D000401 9.1e-07 57.8 116 36.2
CiPaw.02G030800 Carya illinoinensis HOM05D001576 ORTHO05D000401 1.6e-06 57.0 159 38.4
CiPaw.01G307400 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-06 56.6 159 39.6
CiPaw.08G134700 Carya illinoinensis HOM05D001576 ORTHO05D000401 2.0e-06 56.6 159 39.6
Cfa020524 Carpinus fangiana HOM05D020928 ORTHO05D024875 3.5e-06 55.8 155 41.3
CiPaw.15G037700 Carya illinoinensis HOM05D001576 ORTHO05D000401 3.5e-06 55.8 155 39.4
TWI12G0266 Tripterygium wilfordii HOM05D001576 ORTHO05D000401 5.9e-06 55.1 148 39.2
Haze_00879 Corylus avellana HOM05D001311 ORTHO05D001204 7.7e-06 54.7 149 45.6


User provided reference genes

Program Settings