Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021316 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 6.9e-83 310.5 143 100.0
CSS0036883 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 3.2e-56 221.9 124 83.1
Rhsim04G0023700 Rhododendron simsii HOM05D006017 ORTHO05D007821 3.0e-54 215.3 124 79.8
Actinidia18784 Actinidia chinensis HOM05D006017 ORTHO05D007821 5.2e-54 214.5 124 78.2
Solyc12g014100.2 Solanum lycopersicum HOM05D006017 ORTHO05D007821 5.2e-54 214.5 124 77.4
Sopen12g005880 Solanum pennellii HOM05D006017 ORTHO05D007821 5.2e-54 214.5 124 77.4
PGSC0003DMG400015330 Solanum tuberosum HOM05D006017 ORTHO05D007821 5.2e-54 214.5 124 77.4
CAN.G739.4 Capsicum annuum HOM05D006017 ORTHO05D007821 2.6e-53 212.2 124 76.6
Peaxi162Scf00000g00262 Petunia axillaris HOM05D006017 ORTHO05D007821 5.7e-53 211.1 124 75.8
Dinv14956 Davidia involucrata HOM05D006017 ORTHO05D007821 9.7e-53 210.3 124 75.8
vmacro09508 Vaccinium macrocarpon HOM05D006017 ORTHO05D007821 1.3e-52 209.9 124 76.6
Cc05_g11510 Coffea canephora HOM05D006017 ORTHO05D007821 1.7e-52 209.5 119 77.3
Atru.chr2.2344 Acer truncatum HOM05D006017 ORTHO05D007821 6.3e-52 207.6 124 75.0
GSVIVG01014248001 Vitis vinifera HOM05D006017 ORTHO05D007821 6.3e-52 207.6 124 77.4
Cfa019614 Carpinus fangiana HOM05D006017 ORTHO05D007821 1.1e-51 206.8 119 76.5
Nn1g04303 Nelumbo nucifera HOM05D006017 ORTHO05D007821 1.1e-51 206.8 116 77.6
Eucgr.F01184 Eucalyptus grandis HOM05D006017 ORTHO05D007821 2.4e-51 205.7 114 77.2
CiPaw.12G115700 Carya illinoinensis HOM05D006017 ORTHO05D007821 9.1e-51 203.8 116 76.7
AUR62036125 Chenopodium quinoa HOM05D006017 ORTHO05D007821 9.1e-51 203.8 119 72.3
HanXRQChr03g0070991 Helianthus annuus HOM05D006017 ORTHO05D007821 9.1e-51 203.8 124 72.6
Aqoxy1G02214 Aquilegia oxysepala HOM05D006017 ORTHO05D007821 1.6e-50 203.0 124 71.8
MSTRG.14945 Avicennia marina HOM05D006017 ORTHO05D007821 1.6e-50 203.0 124 73.4
Haze_09368 Corylus avellana HOM05D006017 ORTHO05D007821 1.6e-50 203.0 116 77.6
MBI07_g06432_MAGBIO Magnolia biondii HOM05D006017 ORTHO05D007821 1.6e-50 203.0 124 73.4
AUR62019513 Chenopodium quinoa HOM05D006017 ORTHO05D007821 2.0e-50 202.6 119 72.3
SGA_v2.0_scaffold73G24213 Striga asiatica HOM05D006017 ORTHO05D007821 2.7e-50 202.2 116 74.1
EL10Ac4g08290 Beta vulgaris HOM05D006017 ORTHO05D007821 3.5e-50 201.8 116 74.1
Ciclev10008509m.g Citrus clementina HOM05D006017 ORTHO05D007821 3.5e-50 201.8 116 73.3
Eucgr.F01185 Eucalyptus grandis HOM05D006017 ORTHO05D007821 5.9e-50 201.1 114 75.4
Ah.04g164440 Amaranthus hybridus HOM05D006017 ORTHO05D007821 7.7e-50 200.7 119 71.4
Hma1.2p1_0416F.1_g148570 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 7.7e-50 200.7 124 74.2
Sed0020976 Sechium edule HOM05D006017 ORTHO05D007821 7.7e-50 200.7 126 69.0
Lj8A152T86 Lonicera japonica HOM05D006017 ORTHO05D007821 1.3e-49 199.9 116 75.0
Gohir.A01G059400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 1.7e-49 199.5 124 71.8
Gorai.002G065000 Gossypium raimondii HOM05D006017 ORTHO05D007821 1.7e-49 199.5 124 71.8
Cpa.g.sc131.80 Carica papaya HOM05D006017 ORTHO05D007821 2.2e-49 199.1 114 73.7
Manes.03G103900 Manihot esculenta HOM05D006017 ORTHO05D007821 2.2e-49 199.1 124 70.2
PGR083G0123 Punica granatum HOM05D006017 ORTHO05D007821 2.2e-49 199.1 124 70.2
PSO675G4947 Papaver somniferum HOM05D006017 ORTHO05D007821 2.9e-49 198.7 124 71.8
TWI38G0439 Tripterygium wilfordii HOM05D006017 ORTHO05D007821 2.9e-49 198.7 116 74.1
PSO541G6385 Papaver somniferum HOM05D006017 ORTHO05D007821 3.8e-49 198.4 124 71.0
ATR0749G089 Amborella trichopoda HOM05D006017 ORTHO05D007821 5.0e-49 198.0 124 68.5
ClCG07G009900 Citrullus lanatus HOM05D006017 ORTHO05D007821 5.0e-49 198.0 127 66.9
Hund22764 Selenicereus undatus HOM05D006017 ORTHO05D007821 6.5e-49 197.6 116 73.3
DCAR_028453 Daucus carota HOM05D006017 ORTHO05D007821 8.5e-49 197.2 124 71.0
Gohir.D01G045400 Gossypium hirsutum HOM05D006017 ORTHO05D007821 8.5e-49 197.2 124 71.0
Lsat_1_v5_gn_9_98620 Lactuca sativa HOM05D006017 ORTHO05D007821 8.5e-49 197.2 124 69.4
Prupe.4G172100 Prunus persica HOM05D006017 ORTHO05D007821 8.5e-49 197.2 116 74.1
CiPaw.11G165400 Carya illinoinensis HOM05D006017 ORTHO05D007821 1.5e-48 196.4 116 72.4
RcHm_v2.0_Chr5g0031821 Rosa chinensis HOM05D006017 ORTHO05D007821 1.5e-48 196.4 114 75.4
CsaV3_4G008430 Cucumis sativus L. HOM05D006017 ORTHO05D007821 2.5e-48 195.7 127 66.1
CANSAT35G1773 Cannabis sativa HOM05D006017 ORTHO05D007821 3.2e-48 195.3 116 72.4
MELO3C016089.2 Cucumis melo HOM05D006017 ORTHO05D007821 3.2e-48 195.3 127 66.1
FAN21G1753 Fragaria x ananassa HOM05D006017 ORTHO05D007821 3.2e-48 195.3 116 72.4
CDE02G3882 Ceratophyllum demersum HOM05D006017 ORTHO05D007821 4.2e-48 194.9 115 72.2
THA.LOC104811882 Tarenaya hassleriana HOM05D006017 ORTHO05D007821 4.2e-48 194.9 114 71.9
Migut.M00760 Erythranthe guttata HOM05D006017 ORTHO05D007821 5.5e-48 194.5 116 72.4
Thecc.07G102400 Theobroma cacao HOM05D006017 ORTHO05D007821 7.2e-48 194.1 116 72.4
FAN11G3087 Fragaria x ananassa HOM05D006017 ORTHO05D007821 9.4e-48 193.7 116 71.6
Sp6g16110 Schrenkiella parvula HOM05D006017 ORTHO05D007821 9.4e-48 193.7 114 72.8
Thhalv10013691m.g Eutrema salsugineum HOM05D006017 ORTHO05D007821 1.2e-47 193.4 114 71.9
FAN16G2700 Fragaria x ananassa HOM05D006017 ORTHO05D007821 1.2e-47 193.4 116 72.4
BcaB05g22107 Brassica carinata HOM05D006017 ORTHO05D007821 1.6e-47 193.0 114 71.1
QL08p027671 Quercus lobata HOM05D006017 ORTHO05D007821 1.6e-47 193.0 117 75.2
Aa31LG3G9950 Aethionema arabicum HOM05D006017 ORTHO05D007821 2.1e-47 192.6 114 71.9
ECA240G4517 Erigeron canadensis HOM05D006017 ORTHO05D007821 2.7e-47 192.2 124 66.9
Medtr8g463280 Medicago truncatula HOM05D006017 ORTHO05D007821 3.6e-47 191.8 116 70.7
Sc03g0010290 Simmondsia chinensis HOM05D006017 ORTHO05D007821 4.7e-47 191.4 116 70.7
BcaC03g14354 Brassica carinata HOM05D006017 ORTHO05D007821 1.0e-46 190.3 114 70.2
A02p10590 Brassica napus HOM05D006017 ORTHO05D007821 1.0e-46 190.3 114 70.2
C02p17670 Brassica napus HOM05D006017 ORTHO05D007821 1.0e-46 190.3 114 70.2
BraA02t06124Z Brassica rapa HOM05D006017 ORTHO05D007821 1.0e-46 190.3 114 70.2
AL8G29200 Arabidopsis lyrata HOM05D006017 ORTHO05D007821 1.8e-46 189.5 114 70.2
BolC2t07897H Brassica oleracea HOM05D006017 ORTHO05D007821 2.3e-46 189.1 114 69.3
Lalb_Chr03g0030841 Lupinus albus HOM05D006017 ORTHO05D007821 2.3e-46 189.1 119 68.1
Phvul.011G148800 Phaseolus vulgaris HOM05D006017 ORTHO05D007821 2.3e-46 189.1 118 68.6
Ca_23058_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 3.0e-46 188.7 116 71.6
Ca_30664_v3 Cicer arietinum L. HOM05D006017 ORTHO05D007821 3.0e-46 188.7 116 71.6
Carub.0008s1436 Capsella rubella HOM05D006017 ORTHO05D007821 6.8e-46 187.6 114 69.3
TPR.G22540 Trifolium pratense HOM05D006017 ORTHO05D007821 6.8e-46 187.6 116 70.7
arahy.Tifrunner.gnm1.ann1.DSNA77 Arachis hypogaea HOM05D006017 ORTHO05D007821 8.8e-46 187.2 116 69.8
Psat4g138640 Pisum sativum HOM05D006017 ORTHO05D007821 8.8e-46 187.2 116 69.8
Glyma.12G158600 Glycine max HOM05D006017 ORTHO05D007821 1.5e-45 186.4 116 68.1
arahy.Tifrunner.gnm1.ann1.FV2XB3 Arachis hypogaea HOM05D006017 ORTHO05D007821 2.0e-45 186.0 116 69.8
Sabra16G0246500 Salix brachista HOM05D006017 ORTHO05D007821 2.0e-45 186.0 120 68.3
VMungo1127G0952 Vigna mungo HOM05D006017 ORTHO05D007821 3.4e-45 185.3 119 65.5
CARHR267270 Cardamine hirsuta HOM05D006017 ORTHO05D007821 7.5e-45 184.1 114 68.4
Potri.001G374100 Populus trichocarpa HOM05D006017 ORTHO05D007821 9.8e-45 183.7 120 67.5
Lj3g0015312 Lotus japonicus HOM05D006017 ORTHO05D007821 1.3e-44 183.3 116 67.2
Oeu061327.1 Olea europaea HOM05D006017 ORTHO05D007821 1.3e-44 183.3 160 56.9
Oeu061328.1 Olea europaea HOM05D006017 ORTHO05D007821 1.3e-44 183.3 160 56.9
AT5G54080 Arabidopsis thaliana HOM05D006017 ORTHO05D007821 2.2e-44 182.6 114 67.5
unitig_46.g18314 Utricularia gibba HOM05D006017 ORTHO05D007821 1.1e-43 180.3 116 68.1
Glyma.06G234200 Glycine max HOM05D006017 ORTHO05D007821 1.8e-43 179.5 116 65.5
HPP92_003902 Vanilla planifolia HOM05D006017 ORTHO05D007821 1.8e-43 179.5 116 65.5
MD03G1237300 Malus domestica HOM05D006017 ORTHO05D007821 7.7e-42 174.1 103 71.8
Mapoly0078s0002 Marchantia polymorpha HOM05D006017 ORTHO05D007821 1.5e-40 169.9 125 60.0
SEGI_01915 Sequoiadendron giganteum HOM05D006017 ORTHO05D007821 4.2e-40 168.3 119 59.7
AagrBONN_evm.TU.Sc2ySwM_228.2578 Anthoceros agrestis HOM05D006017 ORTHO05D007821 1.2e-39 166.8 119 59.7
Zm00001eb379510 Zea mays HOM05D006017 ORTHO05D007821 6.1e-39 164.5 115 63.5
Os06g0103300 Oryza sativa ssp. japonica HOM05D006017 ORTHO05D007821 3.0e-38 162.2 118 60.2
Pp3c16_940 Physcomitrium patens HOM05D006017 ORTHO05D007821 6.8e-38 161.0 117 56.4
Nitab4.5_0003077g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 5.7e-37 157.9 129 61.2
Nitab4.5_0005445g0020 Nicotiana tabacum HOM05D006017 ORTHO05D007821 1.7e-33 146.4 120 60.8
PRCOL_00000185 Prasinoderma coloniale HOM05D006017 ORTHO05D007821 7.3e-32 141.0 123 52.8
SMO119G0176 Selaginella moellendorffii HOM05D006017 ORTHO05D007821 1.2e-31 140.2 124 50.0
Oeu061326.1 Olea europaea HOM05D006017 ORTHO05D007821 1.6e-31 139.8 77 79.2
TAR436G0001 Trochodendron aralioides HOM05D006017 ORTHO05D007821 8.9e-30 134.0 76 75.0
Cre02.g091200 Chlamydomonas reinhardtii HOM05D006017 ORTHO05D007821 3.2e-27 125.6 119 47.1
CSS0031230 Camellia sinensis var. sinensis HOM05D006017 ORTHO05D007821 9.5e-24 114.0 108 54.6
BcaC04g20394 Brassica carinata HOM05D006017 ORTHO05D007821 5.2e-14 81.6 112 47.3
FvH4_3g19020 Fragaria vesca HOM05D006017 ORTHO05D007821 1.7e-12 76.6 54 64.8
Duzib170G0488 Durio zibethinus HOM05D006017 ORTHO05D007821 5.4e-11 71.6 39 74.4
Hma1.2p1_0416F.1_g148580 Hydrangea macrophylla HOM05D006017 ORTHO05D007821 5.4e-11 71.6 47 72.3
SalBow8G4076 Salvia bowleyana HOM05D006017 ORTHO05D007821 1.9e-08 63.2 36 75.0
BolC9t57289H Brassica oleracea HOM05D006017 ORTHO05D104628 9.5e-08 60.8 68 47.1
C09p44170 Brassica napus HOM05D006017 ORTHO05D017343 6.2e-07 58.2 47 59.6
Glyma.06G234050 Glycine max HOM05D006017 ORTHO05D007821 1.8e-06 56.6 33 72.7


User provided reference genes

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