Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0004878 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.7e-50 202.6 118 100.0
CSS0021268 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 1.7e-50 202.6 118 100.0
CSS0029489 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 4.9e-50 201.1 118 90.7
CSS0004284 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 5.4e-49 197.6 118 98.3
CSS0035925 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 9.8e-43 176.8 112 91.1
CSS0008909 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 5.1e-39 164.5 108 82.4
CSS0050046 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 4.0e-36 154.8 118 81.4
vmacro09107 Vaccinium macrocarpon HOM05D006823 ORTHO05D008608 4.4e-35 151.4 95 85.3
CSS0018235 Camellia sinensis var. sinensis HOM05D006823 ORTHO05D008608 5.8e-35 151.0 102 80.4
CsaV3_3G038970 Cucumis sativus L. HOM05D006823 ORTHO05D008608 3.9e-31 138.3 118 76.3
Sed0007671 Sechium edule HOM05D006823 ORTHO05D008608 3.9e-31 138.3 95 76.8
ClCG10G017400 Citrullus lanatus HOM05D006823 ORTHO05D008608 5.1e-31 137.9 118 75.4
MELO3C009640.2 Cucumis melo HOM05D006823 ORTHO05D008608 1.5e-30 136.3 118 76.3
TWI74G0728 Tripterygium wilfordii HOM05D006823 ORTHO05D008608 1.5e-30 136.3 94 77.7
Rhsim04G0097800 Rhododendron simsii HOM05D006823 ORTHO05D008608 5.6e-30 134.4 94 77.7
Actinidia17264 Actinidia chinensis HOM05D006823 ORTHO05D008608 1.6e-29 132.9 118 72.9
Lj2A371G33 Lonicera japonica HOM05D006823 ORTHO05D008608 2.1e-29 132.5 97 74.2
Manes.08G045100 Manihot esculenta HOM05D006823 ORTHO05D008608 2.8e-29 132.1 95 73.7
Thecc.05G168800 Theobroma cacao HOM05D006823 ORTHO05D008608 3.6e-29 131.7 95 75.8
CANSAT64G2950 Cannabis sativa HOM05D006823 ORTHO05D008608 4.7e-29 131.3 95 72.6
GSVIVG01033521001 Vitis vinifera HOM05D006823 ORTHO05D008608 8.1e-29 130.6 95 73.7
Psat1g009680 Pisum sativum HOM05D006823 ORTHO05D008608 2.4e-28 129.0 118 65.3
Dinv24090 Davidia involucrata HOM05D006823 ORTHO05D008608 4.0e-28 128.3 118 71.2
Eucgr.K01827 Eucalyptus grandis HOM05D006823 ORTHO05D008608 4.0e-28 128.3 93 75.3
Prupe.7G074100 Prunus persica HOM05D006823 ORTHO05D008608 4.0e-28 128.3 95 72.6
Gohir.D09G123300 Gossypium hirsutum HOM05D006823 ORTHO05D008608 5.2e-28 127.9 95 73.7
Gorai.006G141900 Gossypium raimondii HOM05D006823 ORTHO05D008608 5.2e-28 127.9 95 73.7
Medtr1g053570 Medicago truncatula HOM05D006823 ORTHO05D008608 5.2e-28 127.9 118 60.2
CDE04G3233 Ceratophyllum demersum HOM05D006823 ORTHO05D008608 6.9e-28 127.5 119 73.1
DCAR_013557 Daucus carota HOM05D006823 ORTHO05D008608 1.2e-27 126.7 95 69.5
Glyma.02G177100 Glycine max HOM05D006823 ORTHO05D008608 1.2e-27 126.7 118 66.1
TPR.G24279 Trifolium pratense HOM05D006823 ORTHO05D008608 1.2e-27 126.7 118 58.5
FvH4_6g22650 Fragaria vesca HOM05D006823 ORTHO05D008608 1.5e-27 126.3 95 71.6
FAN09G2832 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.5e-27 126.3 118 69.5
FAN14G3816 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.5e-27 126.3 95 71.6
FAN14G5352 Fragaria x ananassa HOM05D006823 ORTHO05D008608 1.5e-27 126.3 95 71.6
MD14G1060400 Malus domestica HOM05D006823 ORTHO05D008608 1.5e-27 126.3 95 71.6
THA.LOC104802464 Tarenaya hassleriana HOM05D006823 ORTHO05D008608 1.5e-27 126.3 97 72.2
Ciclev10012490m.g Citrus clementina HOM05D006823 ORTHO05D008608 2.0e-27 125.9 118 67.8
Gohir.A09G127050 Gossypium hirsutum HOM05D006823 ORTHO05D008608 2.6e-27 125.6 102 67.6
Duzib093G0556 Durio zibethinus HOM05D006823 ORTHO05D008608 4.4e-27 124.8 96 71.9
FAN05G5147 Fragaria x ananassa HOM05D006823 ORTHO05D008608 4.4e-27 124.8 95 70.5
COL.COLO4_36138 Corchorus olitorius HOM05D006823 ORTHO05D008608 5.8e-27 124.4 97 71.1
FAN02G3510 Fragaria x ananassa HOM05D006823 ORTHO05D008608 5.8e-27 124.4 119 69.7
Phvul.007G258100 Phaseolus vulgaris HOM05D006823 ORTHO05D008608 5.8e-27 124.4 101 64.4
Ca_12095_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 7.6e-27 124.0 119 63.0
Ca_26114_v3 Cicer arietinum L. HOM05D006823 ORTHO05D008608 7.6e-27 124.0 119 63.0
Haze_19965 Corylus avellana HOM05D006823 ORTHO05D008608 9.9e-27 123.6 95 70.5
Lj5g0012941 Lotus japonicus HOM05D006823 ORTHO05D008608 9.9e-27 123.6 118 69.5
TAR623G1194 Trochodendron aralioides HOM05D006823 ORTHO05D008608 9.9e-27 123.6 109 66.1
Hund19193 Selenicereus undatus HOM05D006823 ORTHO05D008608 1.3e-26 123.2 101 65.3
Carub.0005s2475 Capsella rubella HOM05D006823 ORTHO05D008608 2.2e-26 122.5 102 60.8
CARHR168210 Cardamine hirsuta HOM05D006823 ORTHO05D008608 2.2e-26 122.5 97 64.9
Lsat_1_v5_gn_8_75541 Lactuca sativa HOM05D006823 ORTHO05D008608 2.2e-26 122.5 95 70.5
Nn7g36040 Nelumbo nucifera HOM05D006823 ORTHO05D008608 3.8e-26 121.7 102 61.8
Atru.chr8.1064 Acer truncatum HOM05D006823 ORTHO05D008608 4.9e-26 121.3 118 65.3
Potri.016G048600 Populus trichocarpa HOM05D006823 ORTHO05D008608 4.9e-26 121.3 119 68.1
Sp5g04810 Schrenkiella parvula HOM05D006823 ORTHO05D008608 6.4e-26 120.9 97 64.9
arahy.Tifrunner.gnm1.ann1.R1CCT6 Arachis hypogaea HOM05D006823 ORTHO05D008608 1.1e-25 120.2 118 64.4
AL5G39560 Arabidopsis lyrata HOM05D006823 ORTHO05D008608 1.9e-25 119.4 97 63.9
A07p23720 Brassica napus HOM05D002947 ORTHO05D003447 1.9e-25 119.4 95 65.3
BraA07t30025Z Brassica rapa HOM05D006823 ORTHO05D008608 1.9e-25 119.4 95 65.3
AUR62012062 Chenopodium quinoa HOM05D006823 ORTHO05D008608 1.9e-25 119.4 94 64.9
HanXRQChr05g0132841 Helianthus annuus HOM05D006823 ORTHO05D008608 2.4e-25 119.0 102 67.6
VMungo0720G1016 Vigna mungo HOM05D006823 ORTHO05D008608 2.4e-25 119.0 102 59.8
RcHm_v2.0_Chr3g0480211 Rosa chinensis HOM05D006823 ORTHO05D008608 3.2e-25 118.6 95 68.4
arahy.Tifrunner.gnm1.ann1.F8HZ0X Arachis hypogaea HOM05D006823 ORTHO05D008608 4.2e-25 118.2 118 63.6
arahy.Tifrunner.gnm1.ann1.HB0B2V Arachis hypogaea HOM05D006823 ORTHO05D008608 4.2e-25 118.2 118 62.7
BcaC08g44877 Brassica carinata HOM05D006823 ORTHO05D008608 4.2e-25 118.2 97 63.9
BolC6t37647H Brassica oleracea HOM05D002947 ORTHO05D003447 4.2e-25 118.2 97 63.9
PSO384G3045 Papaver somniferum HOM05D006823 ORTHO05D008608 4.2e-25 118.2 118 64.4
AT3G57910 Arabidopsis thaliana HOM05D006823 ORTHO05D008608 5.4e-25 117.9 97 61.9
C06p24950 Brassica napus HOM05D002947 ORTHO05D003447 5.4e-25 117.9 97 63.9
CAN.G717.3 Capsicum annuum HOM05D006823 ORTHO05D008608 5.4e-25 117.9 97 64.9
PSO339G6540 Papaver somniferum HOM05D006823 ORTHO05D008608 7.1e-25 117.5 120 65.8
Glyma.10G091300 Glycine max HOM05D006823 ORTHO05D008608 1.2e-24 116.7 118 56.8
arahy.Tifrunner.gnm1.ann1.DD58DK Arachis hypogaea HOM05D006823 ORTHO05D008608 1.6e-24 116.3 118 61.9
arahy.Tifrunner.gnm1.ann1.R3LTDD Arachis hypogaea HOM05D006823 ORTHO05D008608 1.6e-24 116.3 118 61.9
BcaB02g07567 Brassica carinata HOM05D006823 ORTHO05D008608 1.6e-24 116.3 101 60.4
EL10Ac3g06941 Beta vulgaris HOM05D006823 ORTHO05D008608 2.1e-24 115.9 109 55.0
Sopen11g025160 Solanum pennellii HOM05D006823 ORTHO05D008608 2.1e-24 115.9 97 63.9
Solyc11g065380.2 Solanum lycopersicum HOM05D006823 ORTHO05D008608 2.7e-24 115.5 97 63.9
PGSC0003DMG401029997 Solanum tuberosum HOM05D006823 ORTHO05D008608 2.7e-24 115.5 97 63.9
CiPaw.09G031900 Carya illinoinensis HOM05D006823 ORTHO05D008608 3.5e-24 115.2 95 66.3
ECA236G4823 Erigeron canadensis HOM05D006823 ORTHO05D000001 4.6e-24 114.8 103 64.1
Thhalv10006171m.g Eutrema salsugineum HOM05D006823 ORTHO05D008608 6.0e-24 114.4 95 64.2
Lalb_Chr10g0091151 Lupinus albus HOM05D006823 ORTHO05D008608 1.9e-22 109.4 118 56.8
Aqoxy1G00161 Aquilegia oxysepala HOM05D006823 ORTHO05D008608 2.5e-22 109.0 97 58.8
Sabra16G0052300 Salix brachista HOM05D006823 ORTHO05D008608 9.6e-22 107.1 119 63.0
MBI01_g24371_MAGBIO Magnolia biondii HOM05D006823 ORTHO05D008608 1.3e-21 106.7 95 62.1
SGA_v2.0_scaffold69G23076 Striga asiatica HOM05D006823 ORTHO05D008608 1.3e-21 106.7 102 58.8
Aa31LG10G12620 Aethionema arabicum HOM05D006823 ORTHO05D008608 1.6e-21 106.3 102 59.8
MSTRG.19895 Avicennia marina HOM05D006823 ORTHO05D008608 6.9e-20 100.9 118 59.3
HPP92_015470 Vanilla planifolia HOM05D006823 ORTHO05D008608 2.4e-17 92.4 102 54.9
ATR0605G325 Amborella trichopoda HOM05D006823 ORTHO05D008608 3.2e-17 92.0 95 55.8
unitig_26.g9037 Utricularia gibba HOM05D006823 ORTHO05D008608 1.2e-16 90.1 118 55.1
Nitab4.5_0000016g0280 Nicotiana tabacum HOM05D006823 ORTHO05D008608 7.9e-16 87.4 95 51.6
Nitab4.5_0003572g0020 Nicotiana tabacum HOM05D006823 ORTHO05D008608 7.9e-16 87.4 95 51.6
AUR62024323 Chenopodium quinoa HOM05D006823 ORTHO05D008608 6.7e-15 84.3 91 54.9
FvH4_6g22250 Fragaria vesca HOM05D006823 ORTHO05D008608 3.3e-14 82.0 72 65.3
Migut.J01822 Erythranthe guttata HOM05D006823 ORTHO05D008608 5.6e-14 81.3 95 50.5
Sc25g0005140 Simmondsia chinensis HOM05D006823 ORTHO05D008608 6.2e-13 77.8 99 48.5
Mapoly0104s0025 Marchantia polymorpha HOM05D006823 ORTHO05D008608 2.6e-11 72.4 106 41.5
arahy.Tifrunner.gnm1.ann1.WS1HM8 Arachis hypogaea HOM05D006823 ORTHO05D008608 3.4e-11 72.0 67 61.2
SEGI_05037 Sequoiadendron giganteum HOM05D006823 ORTHO05D008608 1.1e-09 67.0 122 36.9
Zm00001eb385990 Zea mays HOM05D006823 ORTHO05D008608 2.4e-09 65.9 126 39.7
Zm00001eb035020 Zea mays HOM05D006823 ORTHO05D008608 3.2e-09 65.5 124 39.5
AagrBONN_evm.TU.Sc2ySwM_369.80 Anthoceros agrestis HOM05D006823 ORTHO05D008608 5.5e-09 64.7 97 41.2
Zm00001eb106730 Zea mays HOM05D006823 ORTHO05D008608 9.3e-09 63.9 126 39.7
Os08g0509500 Oryza sativa ssp. japonica HOM05D006823 ORTHO05D008608 7.9e-08 60.8 94 44.7
Cc00_g14630 Coffea canephora HOM05D006823 ORTHO05D008608 1.8e-07 59.7 94 44.7
Zm00001eb116260 Zea mays HOM05D006823 ORTHO05D008608 3.0e-07 58.9 108 38.0
Pp3c21_14790 Physcomitrium patens HOM05D006823 ORTHO05D008608 6.7e-07 57.8 96 37.5
CBR_g4860 Chara braunii HOM05D006823 ORTHO05D008608 2.5e-06 55.8 105 34.3


User provided reference genes

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