Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021266 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D006165 2.8e-42 174.9 88 100.0
CSS0030757 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D006165 1.6e-37 159.1 90 91.1
Dinv29200 Davidia involucrata HOM05D000028 ORTHO05D006165 2.4e-25 118.6 85 70.6
Hma1.2p1_0415F.1_g148310 Hydrangea macrophylla HOM05D000028 ORTHO05D006165 9.0e-25 116.7 84 69.0
Dinv17287 Davidia involucrata HOM05D000028 ORTHO05D006165 1.5e-24 115.9 83 69.9
Phvul.009G039200 Phaseolus vulgaris HOM05D000028 ORTHO05D006165 7.6e-24 113.6 83 65.1
CSS0029142 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D006165 2.9e-23 111.7 83 69.9
Thecc.03G211000 Theobroma cacao HOM05D000028 ORTHO05D006165 1.4e-22 109.4 85 65.9
Atru.chr12.2465 Acer truncatum HOM05D000028 ORTHO05D006165 3.2e-22 108.2 83 65.1
Atru.chr12.2469 Acer truncatum HOM05D000028 ORTHO05D006165 3.2e-22 108.2 83 65.1
Atru.chr12.2536 Acer truncatum HOM05D000028 ORTHO05D006165 3.2e-22 108.2 83 65.1
vmacro06464 Vaccinium macrocarpon HOM05D000028 ORTHO05D006165 4.2e-22 107.8 83 67.5
Glyma.06G138300 Glycine max HOM05D000028 ORTHO05D006165 5.5e-22 107.5 83 65.1
Duzib068G0829 Durio zibethinus HOM05D000028 ORTHO05D006165 1.2e-21 106.3 85 64.7
MD01G1230200 Malus domestica HOM05D000028 ORTHO05D006165 1.2e-21 106.3 85 64.7
Lalb_Chr10g0103061 Lupinus albus HOM05D000028 ORTHO05D006165 1.6e-21 105.9 85 58.8
Medtr5g068790 Medicago truncatula HOM05D000028 ORTHO05D006165 3.5e-21 104.8 83 60.2
Psat2g061960 Pisum sativum HOM05D000028 ORTHO05D006165 3.5e-21 104.8 85 61.2
TPR.G5815 Trifolium pratense HOM05D000028 ORTHO05D006165 3.5e-21 104.8 83 56.6
Actinidia34281 Actinidia chinensis HOM05D000028 ORTHO05D006165 4.6e-21 104.4 76 67.1
COL.COLO4_14388 Corchorus olitorius HOM05D000028 ORTHO05D006165 6.1e-21 104.0 85 62.4
Prupe.2G320900 Prunus persica HOM05D000028 ORTHO05D006165 6.1e-21 104.0 86 61.6
TPR.G5790 Trifolium pratense HOM05D000028 ORTHO05D006165 6.1e-21 104.0 86 59.3
Medtr5g069040 Medicago truncatula HOM05D000028 ORTHO05D006165 7.9e-21 103.6 83 57.8
PGR042G1905 Punica granatum HOM05D000028 ORTHO05D006165 7.9e-21 103.6 85 64.7
QL09p006522 Quercus lobata HOM05D000028 ORTHO05D006165 1.3e-20 102.8 85 61.2
Glyma.02G222100 Glycine max HOM05D000028 ORTHO05D006165 1.8e-20 102.4 83 61.4
Cfa016142 Carpinus fangiana HOM05D002523 ORTHO05D002951 2.3e-20 102.1 85 63.5
Lalb_Chr17g0344771 Lupinus albus HOM05D000028 ORTHO05D006165 5.1e-20 100.9 86 58.1
Psat7g236960 Pisum sativum HOM05D000028 ORTHO05D006165 8.7e-20 100.1 85 56.5
RcHm_v2.0_Chr1g0383151 Rosa chinensis HOM05D000028 ORTHO05D006165 1.5e-19 99.4 85 61.2
vmacro06462 Vaccinium macrocarpon HOM05D000028 ORTHO05D006165 1.9e-19 99.0 75 68.0
CiPaw.05G207400 Carya illinoinensis HOM05D000028 ORTHO05D006165 2.5e-19 98.6 83 59.0
Gohir.A12G245400 Gossypium hirsutum HOM05D000028 ORTHO05D006165 2.5e-19 98.6 85 57.6
Sc07g0009810 Simmondsia chinensis HOM05D000028 ORTHO05D006165 2.5e-19 98.6 85 52.9
Glyma.02G222000 Glycine max HOM05D000028 ORTHO05D006165 3.3e-19 98.2 82 58.5
Gohir.D12G246100 Gossypium hirsutum HOM05D000028 ORTHO05D006165 3.3e-19 98.2 85 57.6
Gorai.008G263800 Gossypium raimondii HOM05D000028 ORTHO05D006165 3.3e-19 98.2 85 57.6
Psat2g061920 Pisum sativum HOM05D000028 ORTHO05D006165 3.3e-19 98.2 83 56.6
Sabra12G0036300 Salix brachista HOM05D000028 ORTHO05D006165 3.3e-19 98.2 89 53.9
arahy.Tifrunner.gnm1.ann1.6MS9TD Arachis hypogaea HOM05D000028 ORTHO05D006165 4.3e-19 97.8 83 62.7
Peaxi162Scf01026g00264 Petunia axillaris HOM05D000028 ORTHO05D006165 4.3e-19 97.8 89 56.2
Sed0025832 Sechium edule HOM05D000028 ORTHO05D006165 5.7e-19 97.4 76 63.2
Cc01_g04610 Coffea canephora HOM05D000028 ORTHO05D006165 7.4e-19 97.1 82 63.4
PGR083G1462 Punica granatum HOM05D000028 ORTHO05D006165 7.4e-19 97.1 76 67.1
Gohir.D04G000005 Gossypium hirsutum HOM05D000028 ORTHO05D006165 9.7e-19 96.7 91 56.0
Gohir.D04G000700 Gossypium hirsutum HOM05D000028 ORTHO05D006165 9.7e-19 96.7 91 56.0
LjContig00155g0002347 Lotus japonicus HOM05D000028 ORTHO05D006165 9.7e-19 96.7 83 56.6
Rhsim03G0217300 Rhododendron simsii HOM05D000028 ORTHO05D006165 1.6e-18 95.9 70 72.9
arahy.Tifrunner.gnm1.ann1.BCU2N4 Arachis hypogaea HOM05D000028 ORTHO05D006165 2.2e-18 95.5 83 61.4
Medtr3g019050 Medicago truncatula HOM05D000028 ORTHO05D006165 2.2e-18 95.5 83 55.4
Sopen03g021800 Solanum pennellii HOM05D000028 ORTHO05D006165 2.2e-18 95.5 84 56.0
TPR.G5833 Trifolium pratense HOM05D000028 ORTHO05D006165 2.2e-18 95.5 92 50.0
Gorai.012G001700 Gossypium raimondii HOM05D000028 ORTHO05D006165 2.8e-18 95.1 91 54.9
Oeu017363.1 Olea europaea HOM05D000028 ORTHO05D006165 2.8e-18 95.1 77 62.3
CAN.G303.44 Capsicum annuum HOM05D000028 ORTHO05D006165 4.8e-18 94.4 84 58.3
FvH4_7g33100 Fragaria vesca HOM05D000028 ORTHO05D006165 6.3e-18 94.0 85 57.6
Potri.012G007700 Populus trichocarpa HOM05D000028 ORTHO05D006165 1.1e-17 93.2 86 51.2
Solyc03g080070.4 Solanum lycopersicum HOM05D000028 ORTHO05D006165 1.1e-17 93.2 84 54.8
Eucgr.A00970 Eucalyptus grandis HOM05D000028 ORTHO05D006165 1.4e-17 92.8 82 58.5
FAN10G1022 Fragaria x ananassa HOM05D000028 ORTHO05D006165 1.4e-17 92.8 85 57.6
FAN10G2170 Fragaria x ananassa HOM05D000028 ORTHO05D006165 1.4e-17 92.8 85 57.6
Glyma.14G189200 Glycine max HOM05D000028 ORTHO05D006165 1.4e-17 92.8 83 55.4
FAN01G0940 Fragaria x ananassa HOM05D000028 ORTHO05D006165 1.8e-17 92.4 85 57.6
SGA_v2.0_scaffold18G08484 Striga asiatica HOM05D000028 ORTHO05D006165 1.8e-17 92.4 83 59.0
VMungo0647G2198 Vigna mungo HOM05D000028 ORTHO05D006165 2.4e-17 92.0 83 56.6
TAR375G0937 Trochodendron aralioides HOM05D000028 ORTHO05D006165 3.1e-17 91.7 83 54.2
Sabra12G0009200 Salix brachista HOM05D000028 ORTHO05D006165 6.9e-17 90.5 88 51.1
SalBow4G1903 Salvia bowleyana HOM05D000028 ORTHO05D006165 6.9e-17 90.5 86 59.3
SalBow4G2108 Salvia bowleyana HOM05D000028 ORTHO05D006165 6.9e-17 90.5 86 59.3
CANSAT21G0777 Cannabis sativa HOM05D000028 ORTHO05D006165 9.0e-17 90.1 83 53.0
CANSAT21G1010 Cannabis sativa HOM05D000028 ORTHO05D006165 9.0e-17 90.1 83 53.0
Migut.F00134 Erythranthe guttata HOM05D000028 ORTHO05D006165 9.0e-17 90.1 84 57.1
SGA_v2.0_scaffold5G02751 Striga asiatica HOM05D000028 ORTHO05D006165 9.0e-17 90.1 83 60.2
FAN03G0459 Fragaria x ananassa HOM05D000028 ORTHO05D006165 1.2e-16 89.7 85 55.3
LjContig00155g0011791 Lotus japonicus HOM05D000028 ORTHO05D006165 1.2e-16 89.7 75 53.3
Hund09730 Selenicereus undatus HOM05D000028 ORTHO05D006165 2.6e-16 88.6 77 55.8
Peaxi162Scf00542g00017 Petunia axillaris HOM05D000028 ORTHO05D006165 3.4e-16 88.2 76 56.6
Cpa.g.sc3.172 Carica papaya HOM05D000028 ORTHO05D006165 4.5e-16 87.8 77 61.0
Lj1A1030G34 Lonicera japonica HOM05D000028 ORTHO05D006165 4.5e-16 87.8 70 61.4
Hund21075 Selenicereus undatus HOM05D000028 ORTHO05D006165 5.9e-16 87.4 72 56.9
Nn6g33769 Nelumbo nucifera HOM05D000028 ORTHO05D006165 7.7e-16 87.0 83 49.4
DCAR_014596 Daucus carota HOM05D000028 ORTHO05D006165 1.0e-15 86.7 82 57.3
CiPaw.06G039100 Carya illinoinensis HOM05D000028 ORTHO05D006165 1.7e-15 85.9 83 51.8
CANSAT21G1254 Cannabis sativa HOM05D000028 ORTHO05D006165 2.2e-15 85.5 87 52.9
Haze_00318 Corylus avellana HOM05D000028 ORTHO05D006165 2.5e-14 82.0 60 70.0
Sc13g0010620 Simmondsia chinensis HOM05D000028 ORTHO05D006165 3.2e-14 81.6 84 47.6
CANSAT21G0119 Cannabis sativa HOM05D000028 ORTHO05D006165 4.2e-14 81.3 69 56.5
Cpa.g.sc3.173 Carica papaya HOM05D000028 ORTHO05D006165 1.6e-13 79.3 70 61.4
HPP92_008984 Vanilla planifolia HOM05D000028 ORTHO05D006165 2.1e-13 79.0 80 48.8
Cc03_g14930 Coffea canephora HOM05D000028 ORTHO05D006165 3.6e-13 78.2 83 45.8
Ah.07g204340 Amaranthus hybridus HOM05D000028 ORTHO05D006165 4.6e-13 77.8 59 62.7
Phvul.008G188800 Phaseolus vulgaris HOM05D000028 ORTHO05D006165 1.5e-11 72.8 56 64.3
HPP92_022289 Vanilla planifolia HOM05D000028 ORTHO05D006165 2.0e-11 72.4 72 47.2
Nitab4.5_0000021g0050 Nicotiana tabacum HOM05D000028 ORTHO05D006165 3.3e-11 71.6 60 58.3
Medtr5g089390 Medicago truncatula HOM05D000028 ORTHO05D006165 4.3e-11 71.2 84 45.2
Peaxi162Scf01026g00265 Petunia axillaris HOM05D000028 ORTHO05D006165 4.3e-11 71.2 95 40.0
MBI04_g33446_MAGBIO Magnolia biondii HOM05D000028 ORTHO05D006165 1.7e-10 69.3 77 44.2
ClCG07G009680 Citrullus lanatus HOM05D000028 ORTHO05D006165 4.8e-10 67.8 50 66.0
Lalb_Chr17g0344801 Lupinus albus HOM05D000028 ORTHO05D006165 4.1e-09 64.7 43 69.8
Lj6C588G11 Lonicera japonica HOM05D000028 ORTHO05D006165 6.9e-09 63.9 76 47.4
Os10g0198900 Oryza sativa ssp. japonica HOM05D000028 ORTHO05D006165 6.9e-09 63.9 71 45.1
MBI04_g33445_MAGBIO Magnolia biondii HOM05D000028 ORTHO05D006165 2.0e-08 62.4 72 40.3
Os10g0199500 Oryza sativa ssp. japonica HOM05D000028 ORTHO05D006165 2.0e-08 62.4 71 42.3
Os10g0197700 Oryza sativa ssp. japonica HOM05D000028 ORTHO05D006165 3.4e-08 61.6 89 37.1
Zm00001eb112240 Zea mays HOM05D000028 ORTHO05D006165 2.9e-07 58.5 71 42.3
Os12g0288000 Oryza sativa ssp. japonica HOM05D000028 ORTHO05D006165 2.5e-06 55.5 72 37.5


User provided reference genes

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