Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021257 Camellia sinensis var. sinensis HOM05D014065 ORTHO05D000001 4.7e-28 127.1 62 100.0
Hma1.2p1_0001F.1_g001500 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.0e-19 97.4 61 75.4
Rhsim05G0026100 Rhododendron simsii HOM05D000002 ORTHO05D000001 6.8e-19 96.7 61 70.5
COL.COLO4_14937 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.5e-18 95.5 61 70.5
TAR386G0001 Trochodendron aralioides HOM05D000002 ORTHO05D000001 4.4e-18 94.0 59 74.6
COL.COLO4_20725 Corchorus olitorius HOM05D000002 ORTHO05D000001 2.9e-17 91.3 57 73.7
COL.COLO4_38403 Corchorus olitorius HOM05D000002 ORTHO05D000001 5.4e-16 87.0 61 67.2
COL.COLO4_06456 Corchorus olitorius HOM05D000002 ORTHO05D000001 7.8e-15 83.2 59 59.3
COL.COLO4_23623 Corchorus olitorius HOM05D000002 ORTHO05D000001 7.8e-15 83.2 59 61.0
Rhsim02G0228300 Rhododendron simsii HOM05D000002 ORTHO05D000001 5.0e-14 80.5 61 57.4
QL04p082088 Quercus lobata HOM05D000002 ORTHO05D000001 7.3e-13 76.6 61 55.7
COL.COLO4_33694 Corchorus olitorius HOM05D000002 ORTHO05D000001 9.5e-13 76.3 56 64.3
COL.COLO4_20536 Corchorus olitorius HOM05D000002 ORTHO05D000001 4.7e-12 73.9 58 56.9
COL.COLO4_30477 Corchorus olitorius HOM05D000002 ORTHO05D000001 4.7e-12 73.9 58 56.9
SHI16346 Sapria himalayana HOM05D000002 ORTHO05D000001 4.7e-12 73.9 61 54.1
TPR.G24932 Trifolium pratense HOM05D000002 ORTHO05D000001 4.7e-12 73.9 61 55.7
Lj3g0007998 Lotus japonicus HOM05D000002 ORTHO05D000001 6.2e-12 73.6 58 56.9
SHI11483 Sapria himalayana HOM05D014065 ORTHO05D000001 1.1e-11 72.8 61 54.1
CiPaw.14G131300 Carya illinoinensis HOM05D000750 ORTHO05D000714 1.4e-11 72.4 61 52.5
TPR.G17518 Trifolium pratense HOM05D000002 ORTHO05D000001 1.4e-11 72.4 61 54.1
SHI07546 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-11 71.6 58 56.9
COL.COLO4_33905 Corchorus olitorius HOM05D000002 ORTHO05D000001 3.1e-11 71.2 56 57.1
COL.COLO4_24324 Corchorus olitorius HOM05D000002 ORTHO05D000001 1.2e-10 69.3 50 62.0
QL04p024973 Quercus lobata HOM05D000002 ORTHO05D000001 7.5e-10 66.6 58 53.4
Eucgr.E01636 Eucalyptus grandis HOM05D000002 ORTHO05D000001 1.9e-08 62.0 63 52.4
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 2.4e-08 61.6 57 56.1
PGR102G3059 Punica granatum HOM05D000002 ORTHO05D000001 2.4e-08 61.6 61 52.5
SHI12187 Sapria himalayana HOM05D014065 ORTHO05D023016 3.2e-08 61.2 48 56.2
Hma1.2p1_0270F.1_g108510 Hydrangea macrophylla HOM05D004993 ORTHO05D000001 5.4e-08 60.5 57 52.6
Hma1.2p1_0565F.1_g179600 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.1e-08 60.1 62 46.8
Hma1.2p1_0939F.1_g239370 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.1e-08 60.1 62 46.8
Hma1.2p1_0944F.1_g239940 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 7.1e-08 60.1 56 51.8
Hma1.2p1_0000F.1_g000910 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 1.2e-07 59.3 59 52.5
Sabra01G0117000 Salix brachista HOM05D000002 ORTHO05D000001 1.6e-07 58.9 60 46.7
Hma1.2p1_0315F.1_g122550 Hydrangea macrophylla HOM05D004993 ORTHO05D000001 2.1e-07 58.5 57 54.4
Hma1.2p1_0473F.1_g160130 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 2.1e-07 58.5 59 49.2
Hma1.2p1_2459F.1_g322540 Hydrangea macrophylla HOM05D004993 ORTHO05D012706 2.1e-07 58.5 52 55.8
Rhsim08G0105700 Rhododendron simsii HOM05D000995 ORTHO05D000001 2.7e-07 58.2 44 65.9
Hma1.2p1_0242F.1_g100810 Hydrangea macrophylla HOM05D004993 ORTHO05D012706 6.0e-07 57.0 57 52.6
SHI38837 Sapria himalayana HOM05D004993 ORTHO05D000001 7.8e-07 56.6 60 51.7
SHI18682 Sapria himalayana HOM05D004993 ORTHO05D000001 1.0e-06 56.2 57 50.9
SHI14760 Sapria himalayana HOM05D004993 ORTHO05D000001 1.3e-06 55.8 59 50.8
SHI27389 Sapria himalayana HOM05D004993 ORTHO05D000001 1.7e-06 55.5 57 50.9
SHI42894 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-06 55.5 55 52.7
Aa31LG3G5060 Aethionema arabicum HOM05D000002 ORTHO05D000001 2.3e-06 55.1 65 41.5
Hma1.2p1_0022F.1_g014640 Hydrangea macrophylla HOM05D004993 ORTHO05D012706 2.3e-06 55.1 57 52.6
TPR.G512 Trifolium pratense HOM05D011146 ORTHO05D012706 5.1e-06 53.9 53 52.8
Atru.chr10.1206 Acer truncatum HOM05D000002 ORTHO05D000001 8.6e-06 53.1 59 47.5


User provided reference genes

Program Settings