Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021227 Camellia sinensis var. sinensis HOM05D000050 ORTHO05D023833 6.5e-105 384.0 189 100.0
CSS0002447 Camellia sinensis var. sinensis HOM05D000050 ORTHO05D006094 4.6e-34 148.7 84 88.1
Nitab4.5_0005702g0010 Nicotiana tabacum HOM05D000050 ORTHO05D006094 4.6e-34 148.7 102 76.5
Nitab4.5_0000062g0370 Nicotiana tabacum HOM05D000050 ORTHO05D006094 1.3e-33 147.1 88 83.0
Potri.006G026900 Populus trichocarpa HOM05D000050 ORTHO05D006094 2.3e-33 146.4 84 85.7
vmacro07592 Vaccinium macrocarpon HOM05D000050 ORTHO05D006094 3.0e-33 146.0 84 85.7
Peaxi162Scf00153g01027 Petunia axillaris HOM05D000050 ORTHO05D006094 3.9e-33 145.6 84 85.7
RhsimUnG0021100 Rhododendron simsii HOM05D000050 ORTHO05D006094 3.9e-33 145.6 84 85.7
SGA_v2.0_scaffold66G22321 Striga asiatica HOM05D000050 ORTHO05D006094 3.9e-33 145.6 90 81.1
COL.COLO4_22768 Corchorus olitorius HOM05D000050 ORTHO05D006094 5.1e-33 145.2 106 72.6
SGA_v2.0_scaffold69G23199 Striga asiatica HOM05D000050 ORTHO05D006094 5.1e-33 145.2 84 84.5
CSS0029587 Camellia sinensis var. sinensis HOM05D000050 ORTHO05D006094 6.6e-33 144.8 84 85.7
Nn7g37175 Nelumbo nucifera HOM05D000050 ORTHO05D006094 6.6e-33 144.8 84 84.5
Potri.016G024800 Populus trichocarpa HOM05D000050 ORTHO05D006094 6.6e-33 144.8 84 84.5
QL07p015372 Quercus lobata HOM05D000050 ORTHO05D006094 6.6e-33 144.8 84 84.5
Cc06_g22700 Coffea canephora HOM05D000050 ORTHO05D006094 8.7e-33 144.4 105 71.4
Thecc.05G130500 Theobroma cacao HOM05D000050 ORTHO05D006094 8.7e-33 144.4 84 84.5
arahy.Tifrunner.gnm1.ann1.Z0C2B4 Arachis hypogaea HOM05D000050 ORTHO05D006094 1.1e-32 144.1 89 80.9
arahy.Tifrunner.gnm1.ann1.Z6KCP2 Arachis hypogaea HOM05D000050 ORTHO05D006094 1.1e-32 144.1 89 80.9
CAN.G128.107 Capsicum annuum HOM05D000050 ORTHO05D006094 1.1e-32 144.1 84 84.5
Gohir.A11G305200 Gossypium hirsutum HOM05D000050 ORTHO05D006094 1.1e-32 144.1 84 84.5
Gohir.D11G320600 Gossypium hirsutum HOM05D000050 ORTHO05D006094 1.1e-32 144.1 84 84.5
PGR142G1375 Punica granatum HOM05D000050 ORTHO05D006094 1.1e-32 144.1 84 83.3
Migut.J01570 Erythranthe guttata HOM05D000050 ORTHO05D006094 1.5e-32 143.7 84 84.5
Lj2A416G30 Lonicera japonica HOM05D000050 ORTHO05D006094 1.5e-32 143.7 84 84.5
TWI74G0450 Tripterygium wilfordii HOM05D000050 ORTHO05D006094 1.5e-32 143.7 84 84.5
Prupe.7G024400 Prunus persica HOM05D000050 ORTHO05D006094 1.9e-32 143.3 84 84.5
Actinidia37861 Actinidia chinensis HOM05D000050 ORTHO05D006094 3.3e-32 142.5 84 84.5
Gorai.007G350800 Gossypium raimondii HOM05D000050 ORTHO05D006094 3.3e-32 142.5 82 85.4
HanXRQChr07g0200131 Helianthus annuus HOM05D000050 ORTHO05D006094 3.3e-32 142.5 84 84.5
MBI13_g32884_MAGBIO Magnolia biondii HOM05D000050 ORTHO05D006094 3.3e-32 142.5 93 73.1
Sc13g0000750 Simmondsia chinensis HOM05D000050 ORTHO05D006094 4.3e-32 142.1 84 84.5
TWI53G0709 Tripterygium wilfordii HOM05D000050 ORTHO05D006094 4.3e-32 142.1 84 83.3
Cpa.g.sc92.55 Carica papaya HOM05D000050 ORTHO05D006094 5.6e-32 141.7 84 83.3
CiPaw.09G161800 Carya illinoinensis HOM05D000050 ORTHO05D006094 5.6e-32 141.7 84 82.1
Atru.chr8.916 Acer truncatum HOM05D000050 ORTHO05D006094 7.3e-32 141.4 84 82.1
Duzib128G0594 Durio zibethinus HOM05D000050 ORTHO05D006094 7.3e-32 141.4 84 83.3
Solyc10g081160.2 Solanum lycopersicum HOM05D000050 ORTHO05D006094 7.3e-32 141.4 84 82.1
Sopen10g031660 Solanum pennellii HOM05D000050 ORTHO05D006094 7.3e-32 141.4 84 82.1
PGSC0003DMG400028110 Solanum tuberosum HOM05D000050 ORTHO05D006094 7.3e-32 141.4 84 82.1
CiPaw.10G122100 Carya illinoinensis HOM05D000050 ORTHO05D006094 9.6e-32 141.0 84 82.1
Ciclev10012469m.g Citrus clementina HOM05D000050 ORTHO05D006094 9.6e-32 141.0 84 82.1
Duzib093G1108 Durio zibethinus HOM05D000050 ORTHO05D006094 9.6e-32 141.0 89 78.7
HanXRQChr14g0448081 Helianthus annuus HOM05D000050 ORTHO05D006094 9.6e-32 141.0 84 83.3
Lsat_1_v5_gn_2_86281 Lactuca sativa HOM05D000050 ORTHO05D006094 9.6e-32 141.0 90 77.8
GSVIVG01025833001 Vitis vinifera HOM05D000050 ORTHO05D006094 9.6e-32 141.0 88 79.5
Dinv02783 Davidia involucrata HOM05D000050 ORTHO05D006094 1.3e-31 140.6 84 84.5
MD14G1093100 Malus domestica HOM05D000050 ORTHO05D006094 1.3e-31 140.6 84 83.3
SalBow6G5391 Salvia bowleyana HOM05D000050 ORTHO05D006094 1.3e-31 140.6 84 82.1
Lsat_1_v5_gn_4_175421 Lactuca sativa HOM05D000050 ORTHO05D006094 1.6e-31 140.2 85 81.2
CANSAT21G2133 Cannabis sativa HOM05D000050 ORTHO05D006094 2.1e-31 139.8 84 82.1
Migut.K00181 Erythranthe guttata HOM05D000050 ORTHO05D006094 2.1e-31 139.8 84 82.1
TAR633G2380 Trochodendron aralioides HOM05D000050 ORTHO05D006094 2.1e-31 139.8 84 82.1
ATR1096G087 Amborella trichopoda HOM05D000050 ORTHO05D006094 2.8e-31 139.4 84 79.8
MSTRG.19762 Avicennia marina HOM05D000050 ORTHO05D006094 2.8e-31 139.4 84 81.0
RcHm_v2.0_Chr3g0495201 Rosa chinensis HOM05D000050 ORTHO05D006094 2.8e-31 139.4 84 82.1
ClCG04G004980 Citrullus lanatus HOM05D000050 ORTHO05D006094 3.6e-31 139.0 85 82.4
AUR62020984 Chenopodium quinoa HOM05D000050 ORTHO05D006094 6.2e-31 138.3 84 81.0
Psat0s3111g0040 Pisum sativum HOM05D000050 ORTHO05D006094 6.2e-31 138.3 84 82.1
Glyma.19G121700 Glycine max HOM05D000050 ORTHO05D006094 8.1e-31 137.9 82 82.9
Hma1.2p1_0153F.1_g067960 Hydrangea macrophylla HOM05D000050 ORTHO05D006094 8.1e-31 137.9 89 77.5
Manes.09G074400 Manihot esculenta HOM05D000050 ORTHO05D006094 8.1e-31 137.9 84 81.0
Phvul.001G102600 Phaseolus vulgaris HOM05D000050 ORTHO05D006094 8.1e-31 137.9 82 82.9
VMungo1383G0912 Vigna mungo HOM05D000050 ORTHO05D006094 1.1e-30 137.5 82 82.9
Ah.04g150110 Amaranthus hybridus HOM05D000050 ORTHO05D006094 1.4e-30 137.1 84 79.8
EL10Ac3g07360 Beta vulgaris HOM05D000050 ORTHO05D006094 1.4e-30 137.1 85 80.0
DCAR_013516 Daucus carota HOM05D000050 ORTHO05D006094 1.8e-30 136.7 84 79.8
MD12G1099900 Malus domestica HOM05D000050 ORTHO05D006094 1.8e-30 136.7 84 79.8
Manes.02G219500 Manihot esculenta HOM05D000050 ORTHO05D006094 1.8e-30 136.7 84 79.8
DCAR_020624 Daucus carota HOM05D000050 ORTHO05D006094 2.4e-30 136.3 84 81.0
ECA246G3238 Erigeron canadensis HOM05D000050 ORTHO05D006094 2.4e-30 136.3 84 82.1
Eucgr.K01701 Eucalyptus grandis HOM05D000050 ORTHO05D006094 2.4e-30 136.3 82 81.7
Glyma.19G072800 Glycine max HOM05D000050 ORTHO05D006094 2.4e-30 136.3 82 81.7
Lalb_Chr14g0365241 Lupinus albus HOM05D000050 ORTHO05D006094 3.1e-30 136.0 82 80.5
Oeu009509.1 Olea europaea HOM05D000050 ORTHO05D006094 3.1e-30 136.0 84 79.8
Oeu044221.1 Olea europaea HOM05D000050 ORTHO05D006094 3.1e-30 136.0 85 78.8
EL10Ac2g03323 Beta vulgaris HOM05D000050 ORTHO05D006094 4.0e-30 135.6 89 76.4
FvH4_1g29560 Fragaria vesca HOM05D000050 ORTHO05D006094 4.0e-30 135.6 84 79.8
Lalb_Chr24g0400711 Lupinus albus HOM05D000050 ORTHO05D006094 5.3e-30 135.2 82 79.3
TPR.G23680 Trifolium pratense HOM05D000050 ORTHO05D006094 5.3e-30 135.2 84 81.0
AUR62018450 Chenopodium quinoa HOM05D000050 ORTHO05D006094 6.9e-30 134.8 84 79.8
Glyma.03G004200 Glycine max HOM05D000050 ORTHO05D006094 6.9e-30 134.8 82 80.5
MBI19_g10815_MAGBIO Magnolia biondii HOM05D000050 ORTHO05D006094 6.9e-30 134.8 84 78.6
FAN19G1441 Fragaria x ananassa HOM05D000050 ORTHO05D006094 9.0e-30 134.4 90 74.4
FAN26G1674 Fragaria x ananassa HOM05D000050 ORTHO05D006094 9.0e-30 134.4 84 77.4
Lj1g0018365 Lotus japonicus HOM05D000050 ORTHO05D006094 9.0e-30 134.4 82 80.5
PSO339G5524 Papaver somniferum HOM05D000050 ORTHO05D006094 9.0e-30 134.4 82 80.5
PSO384G4718 Papaver somniferum HOM05D000050 ORTHO05D006094 9.0e-30 134.4 82 80.5
ECA238G2534 Erigeron canadensis HOM05D000050 ORTHO05D006094 1.2e-29 134.0 84 78.6
Sed0004724 Sechium edule HOM05D000050 ORTHO05D006094 1.2e-29 134.0 84 78.6
Medtr7g087590 Medicago truncatula HOM05D000050 ORTHO05D006094 1.5e-29 133.7 84 79.8
MSTRG.6282 Avicennia marina HOM05D000050 ORTHO05D006094 2.6e-29 132.9 84 77.4
THA.LOC104826883 Tarenaya hassleriana HOM05D000050 ORTHO05D006094 2.6e-29 132.9 84 77.4
THA.LOC104823160 Tarenaya hassleriana HOM05D000050 ORTHO05D006094 3.4e-29 132.5 84 77.4
Lalb_Chr22g0358131 Lupinus albus HOM05D000050 ORTHO05D006094 5.8e-29 131.7 82 79.3
THA.LOC104816492 Tarenaya hassleriana HOM05D000050 ORTHO05D006094 7.6e-29 131.3 84 78.6
Aqoxy1G00103 Aquilegia oxysepala HOM05D000050 ORTHO05D006094 9.9e-29 131.0 84 78.6
CDE08G1544 Ceratophyllum demersum HOM05D000050 ORTHO05D006094 1.7e-28 130.2 84 76.2
HPP92_010290 Vanilla planifolia HOM05D000050 ORTHO05D006094 1.7e-28 130.2 84 77.4
AL6G14860 Arabidopsis lyrata HOM05D000050 ORTHO05D006094 4.9e-28 128.6 84 77.4
unitig_46.g18483 Utricularia gibba HOM05D000050 ORTHO05D006094 4.9e-28 128.6 82 75.6
A10p31070 Brassica napus HOM05D000050 ORTHO05D006094 6.4e-28 128.3 85 75.3
BraA10t45151Z Brassica rapa HOM05D000050 ORTHO05D006094 6.4e-28 128.3 85 75.3
CsaV3_4G027690 Cucumis sativus L. HOM05D000050 ORTHO05D006094 6.4e-28 128.3 84 77.4
Zm00001eb389230 Zea mays HOM05D000050 ORTHO05D006094 6.4e-28 128.3 82 78.0
AT5G05080 Arabidopsis thaliana HOM05D000050 ORTHO05D006094 1.1e-27 127.5 84 76.2
C09p71600 Brassica napus HOM05D000050 ORTHO05D006094 1.1e-27 127.5 84 76.2
Carub.0006s0401 Capsella rubella HOM05D000050 ORTHO05D006094 1.1e-27 127.5 84 76.2
Thhalv10014464m.g Eutrema salsugineum HOM05D000050 ORTHO05D006094 1.1e-27 127.5 84 76.2
Sp6g37750 Schrenkiella parvula HOM05D000050 ORTHO05D006094 1.1e-27 127.5 84 76.2
C03p02430 Brassica napus HOM05D000050 ORTHO05D006094 1.4e-27 127.1 103 64.1
BolC3t12794H Brassica oleracea HOM05D000050 ORTHO05D006094 1.4e-27 127.1 103 64.1
Aa31LG11G5930 Aethionema arabicum HOM05D010535 ORTHO05D005895 1.9e-27 126.7 84 76.2
Os06g0660700 Oryza sativa ssp. japonica HOM05D000050 ORTHO05D006094 1.9e-27 126.7 82 75.6
BcaC06g32219 Brassica carinata HOM05D000050 ORTHO05D006094 2.4e-27 126.3 84 75.0
unitig_37.g12771 Utricularia gibba HOM05D000050 ORTHO05D006094 2.4e-27 126.3 82 73.2
HPP92_015381 Vanilla planifolia HOM05D000050 ORTHO05D006094 2.4e-27 126.3 84 72.6
HPP92_028547 Vanilla planifolia HOM05D000050 ORTHO05D006094 2.4e-27 126.3 84 72.6
Zm00001eb274710 Zea mays HOM05D000050 ORTHO05D006094 3.2e-27 125.9 82 75.6
A03p02080 Brassica napus HOM05D000050 ORTHO05D006094 5.4e-27 125.2 83 74.7
BraA03t09576Z Brassica rapa HOM05D000050 ORTHO05D006094 5.4e-27 125.2 83 74.7
Sed0007736 Sechium edule HOM05D000050 ORTHO05D006094 5.4e-27 125.2 84 75.0
Aa31LG11G5900 Aethionema arabicum HOM05D000050 ORTHO05D006094 7.1e-27 124.8 89 71.9
CARHR208190 Cardamine hirsuta HOM05D000050 ORTHO05D006094 1.2e-26 124.0 81 76.5
HPP92_015180 Vanilla planifolia HOM05D000050 ORTHO05D006094 3.9e-25 119.0 82 72.0
Mapoly0041s0074 Marchantia polymorpha HOM05D000050 ORTHO05D006094 1.6e-23 113.6 84 67.9
AagrBONN_evm.TU.Sc2ySwM_368.1453 Anthoceros agrestis HOM05D000050 ORTHO05D006094 3.7e-23 112.5 84 65.5
CBR_g12172 Chara braunii HOM05D000050 ORTHO05D006094 5.3e-22 108.6 86 59.3
HanXRQChr12g0380851 Helianthus annuus HOM05D000050 ORTHO05D006094 1.5e-21 107.1 83 66.3
SMO118G0233 Selaginella moellendorffii HOM05D000050 ORTHO05D006094 4.5e-21 105.5 81 64.2
CSS0032591 Camellia sinensis var. sinensis HOM05D000050 ORTHO05D023833 9.9e-21 104.4 101 58.4
Haze_20344 Corylus avellana HOM05D000050 ORTHO05D006094 3.8e-20 102.4 84 63.1
Pp3c2_13870 Physcomitrium patens HOM05D000050 ORTHO05D006094 4.2e-19 99.0 86 61.6
C09p71670 Brassica napus HOM05D000050 ORTHO05D006094 3.3e-16 89.4 69 65.2
FAN23G0798 Fragaria x ananassa HOM05D000050 ORTHO05D006094 3.3e-16 89.4 49 85.7
EL10Ac5g10430 Beta vulgaris HOM05D000050 ORTHO05D023833 5.6e-16 88.6 49 83.7
MBI02_g35499_MAGBIO Magnolia biondii HOM05D000373 ORTHO05D011648 8.2e-15 84.7 54 75.9
Potri.010G173100 Populus trichocarpa HOM05D003183 ORTHO05D003697 8.2e-15 84.7 82 57.3
Sabra08G0061600 Salix brachista HOM05D003183 ORTHO05D003697 1.2e-13 80.9 89 53.9
Potri.008G083300 Populus trichocarpa HOM05D003183 ORTHO05D003697 5.8e-13 78.6 82 57.3
C09p71630 Brassica napus HOM05D000050 ORTHO05D006094 1.3e-12 77.4 67 58.2
PRCOL_00002445 Prasinoderma coloniale HOM05D000050 ORTHO05D006094 1.9e-11 73.6 79 45.6
Cre10.g430050 Chlamydomonas reinhardtii HOM05D000050 ORTHO05D006094 7.1e-11 71.6 78 46.2
EL10Ac4g08097 Beta vulgaris HOM05D000050 ORTHO05D023833 2.1e-10 70.1 41 78.0
Sabra10G0132600 Salix brachista HOM05D000050 ORTHO05D023833 2.1e-10 70.1 48 70.8
MCO01G008 Micromonas commoda HOM05D000050 ORTHO05D006094 7.9e-10 68.2 78 41.0
Sabra06G0019800 Salix brachista HOM05D000050 ORTHO05D006094 1.5e-08 63.9 29 93.1
Sabra16G0030700 Salix brachista HOM05D000050 ORTHO05D006094 1.9e-08 63.5 34 82.4
SalBow6G5819 Salvia bowleyana HOM05D000050 ORTHO05D006094 6.3e-07 58.5 28 89.3
MBI02_g43086_MAGBIO Magnolia biondii HOM05D000050 ORTHO05D006094 1.4e-06 57.4 40 72.5
Haze_26727 Corylus avellana HOM05D000050 ORTHO05D164918 1.8e-06 57.0 68 41.2
Migut.N00038 Erythranthe guttata HOM05D000397 ORTHO05D000492 3.1e-06 56.2 83 39.8
Lj4g0010781 Lotus japonicus HOM05D000397 ORTHO05D000492 5.3e-06 55.5 108 32.4
Ca_03424_v3 Cicer arietinum L. HOM05D000050 ORTHO05D006094 6.9e-06 55.1 26 88.5


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