Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021225 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 1.4e-124 449.5 217 100.0
CSS0000358 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 6.3e-120 434.1 213 98.1
CSS0048041 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 3.8e-117 424.9 212 95.8
CSS0001814 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 1.3e-112 409.8 202 97.0
CSS0024445 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 2.4e-111 405.6 200 97.0
CSS0005669 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 5.9e-102 374.4 243 78.2
vmacro17519 Vaccinium macrocarpon HOM05D011229 ORTHO05D013540 8.9e-82 307.4 179 76.0
CSS0023474 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 8.9e-58 227.6 115 97.4
CSS0020961 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 2.0e-57 226.5 115 96.5
CSS0037350 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 4.4e-57 225.3 115 95.7
CSS0042035 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 1.4e-55 220.3 115 94.8
CSS0007770 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 9.6e-52 207.6 115 89.6
CSS0033495 Camellia sinensis var. sinensis HOM05D013222 ORTHO05D013042 8.4e-48 194.5 115 85.2
vmacro14705 Vaccinium macrocarpon HOM05D011229 ORTHO05D013540 4.6e-46 188.7 132 68.2
Rhsim06G0168100 Rhododendron simsii HOM05D023412 ORTHO05D013042 1.8e-29 133.7 190 38.4
Rhsim06G0168300 Rhododendron simsii HOM05D023412 ORTHO05D013042 1.8e-29 133.7 190 38.4
Rhsim06G0168500 Rhododendron simsii HOM05D023412 ORTHO05D013042 1.8e-29 133.7 190 38.4
Rhsim06G0068600 Rhododendron simsii HOM05D023412 ORTHO05D013042 1.6e-27 127.1 183 39.9
Rhsim03G0113200 Rhododendron simsii HOM05D023412 ORTHO05D013042 3.6e-22 109.4 177 35.0
vmacro14522 Vaccinium macrocarpon HOM05D011229 ORTHO05D013540 1.5e-20 104.0 73 65.8
COL.COLO4_06890 Corchorus olitorius HOM05D059189 ORTHO05D013042 1.6e-14 84.0 110 34.5
COL.COLO4_35865 Corchorus olitorius HOM05D059189 ORTHO05D013042 1.6e-14 84.0 125 32.8
vmacro14229 Vaccinium macrocarpon HOM05D000201 ORTHO05D000490 3.8e-08 62.8 54 59.3


User provided reference genes

Program Settings