Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021157 Camellia sinensis var. sinensis HOM05D002243 ORTHO05D001848 2.2e-170 602.4 351 100.0
CSS0016364 Camellia sinensis var. sinensis HOM05D002243 ORTHO05D001848 1.0e-148 530.4 351 91.2
CSS0029796 Camellia sinensis var. sinensis HOM05D002243 ORTHO05D001848 1.2e-139 500.4 353 84.4
CSS0022177 Camellia sinensis var. sinensis HOM05D002243 ORTHO05D001848 2.7e-136 489.2 353 83.0
Actinidia02430 Actinidia chinensis HOM05D002243 ORTHO05D001848 1.5e-54 217.6 307 54.4
Dinv09523 Davidia involucrata HOM05D002243 ORTHO05D001848 1.1e-52 211.5 361 50.7
vmacro01929 Vaccinium macrocarpon HOM05D002243 ORTHO05D001848 2.8e-45 186.8 357 46.8
Rhsim11G0148900 Rhododendron simsii HOM05D002243 ORTHO05D001848 5.9e-43 179.1 366 46.4
Prupe.8G152300 Prunus persica HOM05D002243 ORTHO05D001848 2.0e-30 137.5 308 43.5
Duzib132G0349 Durio zibethinus HOM05D002243 ORTHO05D001848 2.2e-29 134.0 373 39.1
Cfa004723 Carpinus fangiana HOM05D002243 ORTHO05D001848 6.3e-29 132.5 337 39.2
TAR381G0567 Trochodendron aralioides HOM05D002243 ORTHO05D001848 9.1e-28 128.6 335 40.9
CiPaw.05G022100 Carya illinoinensis HOM05D002243 ORTHO05D001848 1.6e-27 127.9 330 40.9
Haze_10330 Corylus avellana HOM05D002243 ORTHO05D001848 2.7e-27 127.1 378 38.1
vmacro22263 Vaccinium macrocarpon HOM05D002243 ORTHO05D001848 2.7e-27 127.1 360 41.4
MSTRG.20241 Avicennia marina HOM05D002243 ORTHO05D001848 4.5e-27 126.3 365 36.4
Peaxi162Scf00016g03211 Petunia axillaris HOM05D002243 ORTHO05D001848 2.3e-26 124.0 352 38.9
TWI59G0771 Tripterygium wilfordii HOM05D002243 ORTHO05D001848 2.5e-25 120.6 384 36.5
Duzib052G0991 Durio zibethinus HOM05D002243 ORTHO05D001848 5.6e-25 119.4 337 37.7
TWI14G1334 Tripterygium wilfordii HOM05D002243 ORTHO05D001848 8.0e-24 115.5 333 38.1
Hma1.2p1_2654F.1_g326230 Hydrangea macrophylla HOM05D002243 ORTHO05D001848 1.4e-23 114.8 358 40.2
Ciclev10028128m.g Citrus clementina HOM05D002243 ORTHO05D001848 1.8e-23 114.4 366 36.1
Nitab4.5_0007488g0020 Nicotiana tabacum HOM05D002243 ORTHO05D001848 8.3e-21 105.5 323 38.1
Lj9P338T47 Lonicera japonica HOM05D002243 ORTHO05D001848 2.4e-20 104.0 324 38.0
MD10G1112600 Malus domestica HOM05D002243 ORTHO05D001848 4.1e-20 103.2 333 37.5
Thecc.02G032300 Theobroma cacao HOM05D002243 ORTHO05D001848 7.0e-20 102.4 334 35.0
Rhsim05G0093600 Rhododendron simsii HOM05D002243 ORTHO05D001848 5.9e-19 99.4 314 38.2
MSTRG.16664 Avicennia marina HOM05D002243 ORTHO05D001848 1.0e-18 98.6 349 35.5
Nitab4.5_0001477g0030 Nicotiana tabacum HOM05D002243 ORTHO05D001848 1.1e-17 95.1 305 38.4
Solyc01g106680.4 Solanum lycopersicum HOM05D002243 ORTHO05D001848 1.1e-17 95.1 354 36.4
MD05G1108600 Malus domestica HOM05D002243 ORTHO05D001848 1.5e-17 94.7 330 37.3
TAR376G0696 Trochodendron aralioides HOM05D002243 ORTHO05D001848 3.3e-17 93.6 327 33.3
PGSC0003DMG400005118 Solanum tuberosum HOM05D002243 ORTHO05D001848 7.3e-17 92.4 327 36.7
Peaxi162Scf00152g00066 Petunia axillaris HOM05D002243 ORTHO05D001848 1.6e-16 91.3 332 38.0
QL11p028600 Quercus lobata HOM05D002243 ORTHO05D001848 1.6e-16 91.3 328 37.5
SalBow6G4432 Salvia bowleyana HOM05D002243 ORTHO05D001848 2.8e-16 90.5 364 33.8
QL11p028729 Quercus lobata HOM05D002243 ORTHO05D001848 1.4e-15 88.2 328 37.5
Sopen01g049010 Solanum pennellii HOM05D002243 ORTHO05D001848 1.8e-15 87.8 358 36.6
Oeu005723.1 Olea europaea HOM05D002243 ORTHO05D001848 2.3e-15 87.4 355 33.0
Potri.009G083900 Populus trichocarpa HOM05D002243 ORTHO05D001848 3.1e-15 87.0 326 35.6
CAN.G504.9 Capsicum annuum HOM05D002243 ORTHO05D001848 6.8e-15 85.9 355 35.2
Cpa.g.sc20.83 Carica papaya HOM05D002243 ORTHO05D001848 6.8e-15 85.9 281 36.7
Oeu010475.1 Olea europaea HOM05D002243 ORTHO05D001848 8.9e-15 85.5 357 34.2
Actinidia00342 Actinidia chinensis HOM05D004598 ORTHO05D005550 1.5e-14 84.7 263 36.5
CANSAT25G2495 Cannabis sativa HOM05D002243 ORTHO05D001848 2.6e-14 84.0 357 32.8
SalBow6G2660 Salvia bowleyana HOM05D002243 ORTHO05D001848 2.6e-14 84.0 364 32.1
RcHm_v2.0_Chr1g0336871 Rosa chinensis HOM05D002243 ORTHO05D001848 5.8e-14 82.8 327 34.3
Lj5P222T65 Lonicera japonica HOM05D002243 ORTHO05D001848 1.3e-13 81.6 322 34.8
Sabra16G0180600 Salix brachista HOM05D002243 ORTHO05D001848 1.3e-13 81.6 388 33.2
COL.COLO4_17804 Corchorus olitorius HOM05D002243 ORTHO05D001848 1.7e-13 81.3 316 35.1
Nn6g34568 Nelumbo nucifera HOM05D002243 ORTHO05D001848 2.2e-13 80.9 334 34.7
ClCG10G009920 Citrullus lanatus HOM05D002243 ORTHO05D001848 4.9e-13 79.7 335 32.5
Glyma.20G136900 Glycine max HOM05D002243 ORTHO05D001848 4.9e-13 79.7 337 34.7
RcHm_v2.0_Chr6g0247781 Rosa chinensis HOM05D002243 ORTHO05D001848 4.9e-13 79.7 333 31.8
Glyma.11G002700 Glycine max HOM05D002243 ORTHO05D001848 1.9e-12 77.8 323 33.4
Atru.chr5.2225 Acer truncatum HOM05D002243 ORTHO05D001848 4.1e-12 76.6 372 33.6
Sabra09G0064600 Salix brachista HOM05D002243 ORTHO05D001848 3.5e-11 73.6 317 33.4
Manes.07G051400 Manihot esculenta HOM05D002243 ORTHO05D001848 6.0e-11 72.8 330 33.0
Manes.10G087900 Manihot esculenta HOM05D002243 ORTHO05D001848 2.3e-10 70.9 412 31.8
Cfa004719 Carpinus fangiana HOM05D000026 ORTHO05D000127 3.9e-10 70.1 158 42.4
Oeu037770.2 Olea europaea HOM05D002243 ORTHO05D001848 1.1e-09 68.6 232 40.1
Medtr1g105890 Medicago truncatula HOM05D002243 ORTHO05D001848 1.5e-09 68.2 345 31.3
TPR.G21154 Trifolium pratense HOM05D002243 ORTHO05D001848 1.5e-09 68.2 345 30.7
DCAR_001867 Daucus carota HOM05D002243 ORTHO05D001848 4.3e-09 66.6 309 33.3
Potri.001G288800 Populus trichocarpa HOM05D002243 ORTHO05D001848 2.1e-08 64.3 387 34.1
DCAR_021931 Daucus carota HOM05D002243 ORTHO05D001848 3.6e-08 63.5 355 32.7
Glyma.17G086000 Glycine max HOM05D002243 ORTHO05D001848 4.7e-08 63.2 347 31.4
Gorai.005G262800 Gossypium raimondii HOM05D002243 ORTHO05D001848 6.2e-08 62.8 373 31.6
AUR62030879 Chenopodium quinoa HOM05D002243 ORTHO05D001848 8.1e-08 62.4 329 30.1
Phvul.007G048200 Phaseolus vulgaris HOM05D002243 ORTHO05D001848 8.1e-08 62.4 350 31.1
MELO3C018032.2 Cucumis melo HOM05D002243 ORTHO05D001848 3.1e-07 60.5 350 28.6
Gohir.D02G234800 Gossypium hirsutum HOM05D002243 ORTHO05D001848 4.0e-07 60.1 373 31.1
Ah.01g007180 Amaranthus hybridus HOM05D002243 ORTHO05D001848 8.9e-07 58.9 325 28.9
MSTRG.27769 Avicennia marina HOM05D002243 ORTHO05D001848 8.9e-07 58.9 294 29.6
FAN24G3407 Fragaria x ananassa HOM05D002243 ORTHO05D001848 1.2e-06 58.5 349 29.5
BcaNung02923 Brassica carinata HOM05D010391 ORTHO05D001848 3.4e-06 57.0 302 30.8
CiPaw.06G162700 Carya illinoinensis HOM05D002243 ORTHO05D001848 4.4e-06 56.6 362 30.7
FAN20G2409 Fragaria x ananassa HOM05D002243 ORTHO05D001848 7.5e-06 55.8 374 28.3
Gohir.A03G213300 Gossypium hirsutum HOM05D002243 ORTHO05D001848 7.5e-06 55.8 369 28.2
Medtr5g005430 Medicago truncatula HOM05D002243 ORTHO05D001848 9.8e-06 55.5 339 31.9


User provided reference genes

Program Settings