Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021155 Camellia sinensis var. sinensis HOM05D004010 ORTHO05D004995 9.4e-110 400.2 202 100.0
Actinidia36110 Actinidia chinensis HOM05D004010 ORTHO05D004995 2.3e-79 299.3 227 70.9
Rhsim10G0018100 Rhododendron simsii HOM05D004010 ORTHO05D004995 1.4e-76 290.0 225 68.4
Dinv33448 Davidia involucrata HOM05D004010 ORTHO05D004995 2.6e-75 285.8 225 67.1
vmacro05856 Vaccinium macrocarpon HOM05D004010 ORTHO05D004995 1.9e-70 269.6 258 60.1
TAR371G0622 Trochodendron aralioides HOM05D004010 ORTHO05D004995 9.5e-70 267.3 225 62.7
QL02p075066 Quercus lobata HOM05D004010 ORTHO05D004995 6.1e-69 264.6 226 61.1
CiPaw.03G042500 Carya illinoinensis HOM05D004010 ORTHO05D004995 2.3e-68 262.7 226 61.5
Nitab4.5_0006802g0030 Nicotiana tabacum HOM05D004010 ORTHO05D004995 2.3e-68 262.7 225 62.2
GSVIVG01032418001 Vitis vinifera HOM05D004010 ORTHO05D004995 1.7e-66 256.5 226 62.4
FvH4_6g51330 Fragaria vesca HOM05D004010 ORTHO05D004995 4.9e-66 255.0 227 59.5
Manes.17G113000 Manihot esculenta HOM05D004010 ORTHO05D004995 6.4e-66 254.6 228 58.3
FAN05G3555 Fragaria x ananassa HOM05D004010 ORTHO05D004995 8.3e-66 254.2 227 59.5
Nn4g22648 Nelumbo nucifera HOM05D004010 ORTHO05D004995 8.3e-66 254.2 227 59.5
FAN05G5546 Fragaria x ananassa HOM05D004010 ORTHO05D004995 1.4e-65 253.4 227 59.5
FAN14G1482 Fragaria x ananassa HOM05D004010 ORTHO05D004995 1.4e-65 253.4 227 59.5
Prupe.3G290300 Prunus persica HOM05D004010 ORTHO05D004995 1.9e-65 253.1 224 60.3
CANSAT64G1980 Cannabis sativa HOM05D004010 ORTHO05D004995 4.1e-65 251.9 227 60.4
Cc07_g01800 Coffea canephora HOM05D004010 ORTHO05D004995 4.1e-65 251.9 227 60.4
Sopen02g031220 Solanum pennellii HOM05D004010 ORTHO05D004995 4.1e-65 251.9 225 61.8
FAN09G4321 Fragaria x ananassa HOM05D004010 ORTHO05D004995 7.0e-65 251.1 227 58.6
Cpa.g.sc108.59 Carica papaya HOM05D004010 ORTHO05D004995 9.2e-65 250.8 228 57.9
Hma1.2p1_1291F.1_g273520 Hydrangea macrophylla HOM05D004010 ORTHO05D004995 1.6e-64 250.0 158 81.0
Solyc02g086500.3 Solanum lycopersicum HOM05D004010 ORTHO05D004995 1.6e-64 250.0 225 61.3
Cfa007379 Carpinus fangiana HOM05D004010 ORTHO05D004995 2.7e-64 249.2 219 62.1
MD09G1028200 Malus domestica HOM05D004010 ORTHO05D004995 4.6e-64 248.4 220 59.5
Sabra16G0225000 Salix brachista HOM05D004010 ORTHO05D004995 4.6e-64 248.4 228 59.2
Sabra16G0225700 Salix brachista HOM05D004010 ORTHO05D004995 4.6e-64 248.4 228 59.2
Ciclev10017517m.g Citrus clementina HOM05D004010 ORTHO05D004995 7.8e-64 247.7 225 57.3
MD17G1029800 Malus domestica HOM05D004010 ORTHO05D004995 7.8e-64 247.7 221 59.7
RcHm_v2.0_Chr2g0173001 Rosa chinensis HOM05D004010 ORTHO05D004995 1.0e-63 247.3 227 58.1
Nitab4.5_0002682g0110 Nicotiana tabacum HOM05D004010 ORTHO05D004995 1.3e-63 246.9 235 59.1
Potri.001G346000 Populus trichocarpa HOM05D004010 ORTHO05D004995 1.7e-63 246.5 228 59.6
Oeu006812.1 Olea europaea HOM05D004010 ORTHO05D004995 8.6e-63 244.2 225 56.9
Lalb_Chr24g0397171 Lupinus albus HOM05D004010 ORTHO05D004995 1.1e-62 243.8 226 58.4
TWI36G0979 Tripterygium wilfordii HOM05D004010 ORTHO05D004995 2.5e-62 242.7 221 59.7
Lj2g0015656 Lotus japonicus HOM05D004010 ORTHO05D004995 5.6e-62 241.5 226 57.5
COL.COLO4_29097 Corchorus olitorius HOM05D004010 ORTHO05D004995 7.3e-62 241.1 226 58.4
Haze_14730 Corylus avellana HOM05D004010 ORTHO05D004995 7.3e-62 241.1 219 60.3
Lsat_1_v5_gn_4_183480 Lactuca sativa HOM05D004010 ORTHO05D004995 2.3e-60 236.1 225 56.0
Thecc.04G015900 Theobroma cacao HOM05D004010 ORTHO05D004995 3.1e-60 235.7 226 58.0
ClCG10G013960 Citrullus lanatus HOM05D004010 ORTHO05D004995 4.0e-60 235.3 226 54.9
Thhalv10003508m.g Eutrema salsugineum HOM05D004010 ORTHO05D004995 6.8e-60 234.6 226 55.3
Actinidia15574 Actinidia chinensis HOM05D004010 ORTHO05D004995 2.6e-59 232.6 169 74.0
AL5G17090 Arabidopsis lyrata HOM05D004010 ORTHO05D004995 2.6e-59 232.6 226 55.3
Duzib187G0443 Durio zibethinus HOM05D004010 ORTHO05D004995 4.4e-59 231.9 226 55.3
PGR142G3424 Punica granatum HOM05D004010 ORTHO05D004995 4.4e-59 231.9 228 54.8
CsaV3_3G042730 Cucumis sativus L. HOM05D004010 ORTHO05D004995 7.5e-59 231.1 226 55.8
MELO3C009985.2 Cucumis melo HOM05D004010 ORTHO05D004995 1.3e-58 230.3 226 55.8
DCAR_001437 Daucus carota HOM05D004010 ORTHO05D004995 1.7e-58 229.9 222 56.3
HanXRQChr09g0255111 Helianthus annuus HOM05D004010 ORTHO05D004995 2.2e-58 229.6 225 56.4
TPR.G14085 Trifolium pratense HOM05D004010 ORTHO05D004995 2.2e-58 229.6 226 54.9
Sed0022234 Sechium edule HOM05D004010 ORTHO05D004995 2.9e-58 229.2 226 54.4
arahy.Tifrunner.gnm1.ann1.TK4K1F Arachis hypogaea HOM05D004010 ORTHO05D004995 3.7e-58 228.8 226 55.8
Eucgr.I01751 Eucalyptus grandis HOM05D004010 ORTHO05D004995 1.4e-57 226.9 226 54.9
Sp2g16800 Schrenkiella parvula HOM05D004010 ORTHO05D004995 4.1e-57 225.3 226 54.0
arahy.Tifrunner.gnm1.ann1.8M6LVM Arachis hypogaea HOM05D004010 ORTHO05D004995 5.4e-57 224.9 226 55.3
Gorai.006G032700 Gossypium raimondii HOM05D004010 ORTHO05D004995 5.4e-57 224.9 226 54.4
AT3G27670 Arabidopsis thaliana HOM05D004010 ORTHO05D004995 9.2e-57 224.2 221 54.3
Carub.0005s0611 Capsella rubella HOM05D004010 ORTHO05D004995 9.2e-57 224.2 226 53.5
BcaC06g33789 Brassica carinata HOM05D004010 ORTHO05D004995 1.7e-55 219.9 226 53.1
C07p36860 Brassica napus HOM05D004010 ORTHO05D004995 1.7e-55 219.9 226 53.1
BolC7t44198H Brassica oleracea HOM05D004010 ORTHO05D004995 1.7e-55 219.9 226 53.1
BcaC06g30965 Brassica carinata HOM05D004010 ORTHO05D004995 3.0e-55 219.2 226 53.1
BraA06t27018Z Brassica rapa HOM05D004010 ORTHO05D004995 1.9e-54 216.5 226 52.7
A06p40990 Brassica napus HOM05D004010 ORTHO05D004995 2.5e-54 216.1 226 52.7
Peaxi162Scf00129g01535 Petunia axillaris HOM05D004010 ORTHO05D004995 2.5e-54 216.1 225 55.1
Aqoxy3G01154 Aquilegia oxysepala HOM05D004010 ORTHO05D004995 9.5e-54 214.2 226 52.7
Medtr6g005010 Medicago truncatula HOM05D004010 ORTHO05D004995 2.1e-53 213.0 226 51.3
THA.LOC104825324 Tarenaya hassleriana HOM05D004010 ORTHO05D004995 2.1e-53 213.0 226 51.3
Phvul.004G009818 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 4.7e-53 211.8 221 54.8
SGA_v2.0_scaffold135G34899 Striga asiatica HOM05D004010 ORTHO05D004995 6.2e-53 211.5 228 50.9
ECA232G4079 Erigeron canadensis HOM05D004010 ORTHO05D004995 1.4e-52 210.3 227 51.5
VMungo0464G1595 Vigna mungo HOM05D004010 ORTHO05D004995 1.4e-52 210.3 227 51.5
Aa31LG2G5000 Aethionema arabicum HOM05D004010 ORTHO05D004995 5.2e-52 208.4 221 51.6
Atru.chr6.2368 Acer truncatum HOM05D004010 ORTHO05D004995 8.9e-52 207.6 211 53.6
CARHR149120 Cardamine hirsuta HOM05D004010 ORTHO05D004995 8.9e-52 207.6 221 52.0
Hund06717 Selenicereus undatus HOM05D004010 ORTHO05D004995 8.9e-52 207.6 223 53.8
Glyma.19G004700 Glycine max HOM05D004010 ORTHO05D004995 1.5e-51 206.8 229 51.5
Ca_04154_v3 Cicer arietinum L. HOM05D004010 ORTHO05D004995 3.4e-51 205.7 226 50.9
SalBow6G2090 Salvia bowleyana HOM05D004010 ORTHO05D004995 4.4e-51 205.3 228 50.0
Sc03g0007550 Simmondsia chinensis HOM05D004010 ORTHO05D004995 2.2e-50 203.0 229 49.8
AUR62043055 Chenopodium quinoa HOM05D004010 ORTHO05D004995 8.3e-50 201.1 230 51.3
Migut.H00083 Erythranthe guttata HOM05D004010 ORTHO05D004995 8.3e-50 201.1 231 48.5
Atru.chr6.2275 Acer truncatum HOM05D004010 ORTHO05D004995 9.2e-49 197.6 161 62.7
PSO478G2834 Papaver somniferum HOM05D004010 ORTHO05D004995 4.6e-48 195.3 227 52.0
CDE05G2835 Ceratophyllum demersum HOM05D004010 ORTHO05D004995 1.3e-47 193.7 224 46.0
AUR62034752 Chenopodium quinoa HOM05D004010 ORTHO05D004995 1.3e-47 193.7 231 50.2
PSO017G0470 Papaver somniferum HOM05D004010 ORTHO05D004995 2.3e-47 193.0 226 50.9
CAN.G473.5 Capsicum annuum HOM05D004010 ORTHO05D004995 1.5e-46 190.3 132 73.5
MBI10_g46391_MAGBIO Magnolia biondii HOM05D004010 ORTHO05D004995 3.8e-42 175.6 276 42.8
EL10Ac4g08587 Beta vulgaris HOM05D004010 ORTHO05D004995 1.9e-41 173.3 231 45.9
FAN14G2166 Fragaria x ananassa HOM05D004010 ORTHO05D004995 9.6e-38 161.0 131 61.8
Ah.06g187170 Amaranthus hybridus HOM05D004010 ORTHO05D004995 1.4e-36 157.1 149 59.7
ATR1158G023 Amborella trichopoda HOM05D004010 ORTHO05D004995 9.9e-35 151.0 225 38.7
Phvul.004G009127 Phaseolus vulgaris HOM05D004010 ORTHO05D004995 9.9e-35 151.0 134 60.4
MBI10_g39276_MAGBIO Magnolia biondii HOM05D004010 ORTHO05D004995 3.8e-34 149.1 223 43.9
FvH4_6g51551 Fragaria vesca HOM05D004010 ORTHO05D004995 2.2e-26 123.2 131 51.9
Mapoly0001s0420 Marchantia polymorpha HOM05D004010 ORTHO05D004995 3.0e-23 112.8 157 39.5
SEGI_19034 Sequoiadendron giganteum HOM05D004010 ORTHO05D004995 6.9e-20 101.7 228 30.3
SMO361G0448 Selaginella moellendorffii HOM05D004010 ORTHO05D004995 1.1e-17 94.4 153 36.6
HPP92_004913 Vanilla planifolia HOM05D004010 ORTHO05D004995 3.9e-15 85.9 84 58.3
FvH4_6g51541 Fragaria vesca HOM05D004010 ORTHO05D004995 8.7e-15 84.7 52 76.9
BcaB05g24178 Brassica carinata HOM05D004010 ORTHO05D027244 1.5e-14 84.0 104 42.3
Psat1g055320 Pisum sativum HOM05D004010 ORTHO05D004995 2.4e-12 76.6 95 47.4
BcaC02g11087 Brassica carinata HOM05D004010 ORTHO05D006095 3.4e-11 72.8 114 41.2
Os01g0169500 Oryza sativa ssp. japonica HOM05D004010 ORTHO05D004995 3.5e-08 62.8 213 30.0
CBR_g19447 Chara braunii HOM05D004010 ORTHO05D004995 7.9e-08 61.6 196 29.1
Lju41A39G70 Lonicera japonica HOM05D004010 ORTHO05D004995 7.9e-08 61.6 58 53.4


User provided reference genes

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