Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021153 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 1.3e-50 202.6 91 100.0
CSS0043617 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 6.9e-28 127.1 65 84.6
CSS0023258 Camellia sinensis var. sinensis HOM05D008295 ORTHO05D010471 2.1e-24 115.5 58 86.2
Potri.013G032700 Populus trichocarpa HOM05D008295 ORTHO05D010471 1.0e-15 86.7 58 62.1
TWI56G0380 Tripterygium wilfordii HOM05D008295 ORTHO05D010471 3.0e-15 85.1 58 60.3
Sabra13G0032600 Salix brachista HOM05D008295 ORTHO05D010471 5.1e-15 84.3 57 61.4
AL3G15280 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 6.7e-15 84.0 76 47.4
Manes.09G157700 Manihot esculenta HOM05D008295 ORTHO05D010471 6.7e-15 84.0 58 56.9
AT3G04945 Arabidopsis thaliana HOM05D008295 ORTHO05D010471 8.8e-15 83.6 77 51.9
Eucgr.H04400 Eucalyptus grandis HOM05D008295 ORTHO05D010471 1.9e-14 82.4 76 50.0
QL04p009826 Quercus lobata HOM05D008295 ORTHO05D010471 1.9e-14 82.4 75 46.7
Duzib106G0032 Durio zibethinus HOM05D008295 ORTHO05D010471 5.7e-14 80.9 77 50.6
CiPaw.07G008800 Carya illinoinensis HOM05D008295 ORTHO05D010471 7.4e-14 80.5 70 50.0
QL04p009829 Quercus lobata HOM05D008295 ORTHO05D010471 7.4e-14 80.5 64 51.6
PGR004G0687 Punica granatum HOM05D008295 ORTHO05D010471 1.7e-13 79.3 58 56.9
CiPaw.08G178100 Carya illinoinensis HOM05D008295 ORTHO05D010471 2.8e-13 78.6 71 50.7
C02p26540 Brassica napus HOM05D008295 ORTHO05D010471 6.3e-13 77.4 75 44.0
Thhalv10022226m.g Eutrema salsugineum HOM05D008295 ORTHO05D010471 8.2e-13 77.0 75 46.7
BcaC05g29971 Brassica carinata HOM05D008295 ORTHO05D010471 1.1e-12 76.6 75 44.0
A02p15960 Brassica napus HOM05D008295 ORTHO05D010471 1.1e-12 76.6 75 44.0
A05p42650 Brassica napus HOM05D008295 ORTHO05D010471 1.1e-12 76.6 75 44.0
C05p62320 Brassica napus HOM05D008295 ORTHO05D010471 1.1e-12 76.6 75 44.0
BraA05t22988Z Brassica rapa HOM05D008295 ORTHO05D010471 1.1e-12 76.6 75 44.0
BcaC05g29925 Brassica carinata HOM05D008295 ORTHO05D010471 1.4e-12 76.3 75 44.0
BolC5t34892H Brassica oleracea HOM05D008295 ORTHO05D010471 1.4e-12 76.3 75 44.0
BolC2t08725H Brassica oleracea HOM05D008295 ORTHO05D010471 1.8e-12 75.9 75 42.7
BcaC03g15093 Brassica carinata HOM05D008295 ORTHO05D010471 2.4e-12 75.5 75 42.7
BcaB05g24460 Brassica carinata HOM05D008295 ORTHO05D010471 3.1e-12 75.1 72 43.1
C05p62360 Brassica napus HOM05D008295 ORTHO05D010471 3.1e-12 75.1 75 42.7
C05p62380 Brassica napus HOM05D008295 ORTHO05D010471 3.1e-12 75.1 75 42.7
A05p42640 Brassica napus HOM05D008295 ORTHO05D010471 4.1e-12 74.7 75 42.7
BraA05t22987Z Brassica rapa HOM05D008295 ORTHO05D010471 4.1e-12 74.7 75 42.7
BraA05t22989Z Brassica rapa HOM05D008295 ORTHO05D010471 4.1e-12 74.7 75 42.7
BcaC05g29923 Brassica carinata HOM05D008295 ORTHO05D010471 5.3e-12 74.3 75 42.7
A03p33940 Brassica napus HOM05D008295 ORTHO05D010471 6.9e-12 73.9 75 48.0
BraA03t12569Z Brassica rapa HOM05D008295 ORTHO05D010471 6.9e-12 73.9 75 48.0
BcaC01g04340 Brassica carinata HOM05D008295 ORTHO05D010471 9.1e-12 73.6 75 46.7
C03p41320 Brassica napus HOM05D008295 ORTHO05D010471 9.1e-12 73.6 75 46.7
BolC3t16414H Brassica oleracea HOM05D008295 ORTHO05D010471 9.1e-12 73.6 75 46.7
BolC5t34888H Brassica oleracea HOM05D008295 ORTHO05D010471 9.1e-12 73.6 75 40.0
BolC3t16413H Brassica oleracea HOM05D008295 ORTHO05D010471 1.5e-11 72.8 88 39.8
Sed0007183 Sechium edule HOM05D008295 ORTHO05D010471 2.0e-11 72.4 50 58.0
C03p41310 Brassica napus HOM05D008295 ORTHO05D010471 2.6e-11 72.0 88 39.8
CARHR079250 Cardamine hirsuta HOM05D008295 ORTHO05D010471 3.4e-11 71.6 76 42.1
BraA02t06655Z Brassica rapa HOM05D008295 ORTHO05D010471 4.5e-11 71.2 76 42.1
A03p33930 Brassica napus HOM05D008295 ORTHO05D010471 2.9e-10 68.6 75 44.0
BraA03t12568Z Brassica rapa HOM05D008295 ORTHO05D010471 2.9e-10 68.6 75 44.0
BcaC01g04341 Brassica carinata HOM05D008295 ORTHO05D010471 3.8e-10 68.2 75 42.7
BolC5t34889H Brassica oleracea HOM05D008295 ORTHO05D010471 7.2e-09 63.9 60 43.3
AL3G37770 Arabidopsis lyrata HOM05D008295 ORTHO05D010471 1.2e-08 63.2 78 38.5
BcaB04g19287 Brassica carinata HOM05D008295 ORTHO05D010471 1.6e-08 62.8 50 54.0
C05p62350 Brassica napus HOM05D008295 ORTHO05D010471 3.6e-08 61.6 74 39.2
TWI12G0056 Tripterygium wilfordii HOM05D008295 ORTHO05D010471 7.9e-08 60.5 57 42.1
Actinidia30915 Actinidia chinensis HOM05D008295 ORTHO05D010471 1.8e-07 59.3 52 50.0


User provided reference genes

Program Settings