Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021130 Camellia sinensis var. sinensis HOM05D003487 ORTHO05D000140 1.2e-56 223.0 116 100.0
Potri.003G047151 Populus trichocarpa HOM05D003487 ORTHO05D000140 5.0e-15 84.7 119 47.1
Potri.012G061366 Populus trichocarpa HOM05D003487 ORTHO05D000140 2.7e-13 79.0 115 44.3
Potri.009G022650 Populus trichocarpa HOM05D003487 ORTHO05D000140 5.2e-12 74.7 116 44.8
Potri.015G008050 Populus trichocarpa HOM05D003487 ORTHO05D000140 8.8e-12 73.9 116 44.0
Potri.004G111750 Populus trichocarpa HOM05D003487 ORTHO05D000140 1.5e-11 73.2 116 44.0
Potri.011G163248 Populus trichocarpa HOM05D003487 ORTHO05D000140 1.5e-11 73.2 116 43.1
Potri.002G206500 Populus trichocarpa HOM05D003487 ORTHO05D000140 3.4e-11 72.0 116 43.1
Rhsim06G0037400 Rhododendron simsii HOM05D000122 ORTHO05D000139 4.4e-11 71.6 123 40.7
Potri.001G157750 Populus trichocarpa HOM05D003487 ORTHO05D000140 7.5e-11 70.9 116 43.1
QL09p003516 Quercus lobata HOM05D000005 ORTHO05D000012 7.5e-11 70.9 116 44.0
Potri.007G059900 Populus trichocarpa HOM05D003487 ORTHO05D000140 1.3e-10 70.1 108 44.4
Potri.006G202550 Populus trichocarpa HOM05D003487 ORTHO05D000140 1.7e-10 69.7 116 43.1
QL06p004451 Quercus lobata HOM05D003487 ORTHO05D000140 2.8e-10 68.9 108 44.4
Potri.006G146100 Populus trichocarpa HOM05D003487 ORTHO05D000140 3.7e-10 68.6 116 41.4
QL09p003562 Quercus lobata HOM05D000005 ORTHO05D000012 4.8e-10 68.2 107 43.9
QL01p054930 Quercus lobata HOM05D003487 ORTHO05D000140 6.3e-10 67.8 108 44.4
QL09p003532 Quercus lobata HOM05D000005 ORTHO05D000012 2.4e-09 65.9 107 43.9
Rhsim06G0037500 Rhododendron simsii HOM05D000122 ORTHO05D000139 3.1e-09 65.5 107 42.1
Potri.005G130601 Populus trichocarpa HOM05D003487 ORTHO05D000140 1.6e-08 63.2 94 43.6
Potri.004G170442 Populus trichocarpa HOM05D003487 ORTHO05D000140 2.0e-08 62.8 104 41.3
Rhsim13G0095900 Rhododendron simsii HOM05D003487 ORTHO05D000140 2.7e-08 62.4 113 38.9
Thecc.04G063900 Theobroma cacao HOM05D003487 ORTHO05D000140 2.3e-07 59.3 105 41.0
Cc00_g12070 Coffea canephora HOM05D000034 ORTHO05D000037 2.9e-07 58.9 104 33.7
Potri.019G009855 Populus trichocarpa HOM05D003487 ORTHO05D000140 2.9e-07 58.9 104 40.4
AUR62035004 Chenopodium quinoa HOM05D000034 ORTHO05D000140 5.0e-07 58.2 102 37.3
Rhsim11G0013100 Rhododendron simsii HOM05D003487 ORTHO05D000140 1.1e-06 57.0 108 39.8
AUR62037304 Chenopodium quinoa HOM05D003487 ORTHO05D000140 2.5e-06 55.8 102 36.3
AUR62042315 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.5e-06 55.8 103 35.9
Cc11_g14620 Coffea canephora HOM05D003487 ORTHO05D000140 2.5e-06 55.8 109 35.8
Hma1.2p1_1819F.1_g304060 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 2.5e-06 55.8 123 35.8
Rhsim08G0145100 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.5e-06 55.8 113 40.7
AUR62038965 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.3e-06 55.5 103 35.9
Hma1.2p1_0854F.1_g228980 Hydrangea macrophylla HOM05D003487 ORTHO05D000140 5.5e-06 54.7 115 37.4
vmacro08955 Vaccinium macrocarpon HOM05D003487 ORTHO05D000140 5.5e-06 54.7 118 37.3


User provided reference genes

Program Settings