Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021129 Camellia sinensis var. sinensis HOM05D000513 ORTHO05D113109 2.8e-54 214.9 101 100.0
MSTRG.19407 Avicennia marina HOM05D000513 ORTHO05D003825 5.7e-23 110.9 64 79.7
Dinv26491 Davidia involucrata HOM05D000513 ORTHO05D003825 7.4e-23 110.5 64 81.2
Migut.J00854 Erythranthe guttata HOM05D000513 ORTHO05D003825 7.4e-23 110.5 64 78.1
Cc06_g23740 Coffea canephora HOM05D000513 ORTHO05D003825 9.7e-23 110.2 66 75.8
Nn8g41230 Nelumbo nucifera HOM05D000513 ORTHO05D003825 1.7e-22 109.4 72 72.2
TAR383G0183 Trochodendron aralioides HOM05D000513 ORTHO05D003825 2.2e-22 109.0 55 87.3
Oeu000960.1 Olea europaea HOM05D000513 ORTHO05D003825 2.8e-22 108.6 64 76.6
Eucgr.C02159 Eucalyptus grandis HOM05D000513 ORTHO05D003825 3.7e-22 108.2 64 78.1
Solyc07g042830.4 Solanum lycopersicum HOM05D000513 ORTHO05D003825 3.7e-22 108.2 66 77.3
Sopen07g022460 Solanum pennellii HOM05D000513 ORTHO05D003825 3.7e-22 108.2 66 77.3
PGSC0003DMG402013540 Solanum tuberosum HOM05D000513 ORTHO05D003825 3.7e-22 108.2 66 77.3
Atru.chr7.995 Acer truncatum HOM05D000513 ORTHO05D003825 4.8e-22 107.8 72 70.8
MD13G1285500 Malus domestica HOM05D000513 ORTHO05D003825 6.3e-22 107.5 64 76.6
RcHm_v2.0_Chr4g0384801 Rosa chinensis HOM05D000513 ORTHO05D003825 6.3e-22 107.5 64 76.6
Cfa012887 Carpinus fangiana HOM05D000513 ORTHO05D003825 8.2e-22 107.1 72 68.1
QL11p007112 Quercus lobata HOM05D000513 ORTHO05D003825 8.2e-22 107.1 72 70.8
CiPaw.08G000700 Carya illinoinensis HOM05D000513 ORTHO05D003825 1.1e-21 106.7 55 85.5
MBI16_g00829_MAGBIO Magnolia biondii HOM05D000513 ORTHO05D003825 1.1e-21 106.7 64 76.6
GSVIVG01032233001 Vitis vinifera HOM05D000513 ORTHO05D003825 1.1e-21 106.7 64 76.6
PGR044G0413 Punica granatum HOM05D000513 ORTHO05D003825 1.4e-21 106.3 64 76.6
Actinidia02548 Actinidia chinensis HOM05D000513 ORTHO05D003825 1.8e-21 105.9 64 76.6
FvH4_4g00200 Fragaria vesca HOM05D000513 ORTHO05D003825 1.8e-21 105.9 64 75.0
FAN12G3115 Fragaria x ananassa HOM05D000513 ORTHO05D003825 1.8e-21 105.9 64 75.0
Nitab4.5_0000170g0160 Nicotiana tabacum HOM05D000513 ORTHO05D003825 2.4e-21 105.5 66 74.2
SalBow6G1032 Salvia bowleyana HOM05D000513 ORTHO05D003825 2.4e-21 105.5 64 76.6
Rhsim01G0106500 Rhododendron simsii HOM05D000513 ORTHO05D003825 3.1e-21 105.1 64 75.0
Ciclev10007868m.g Citrus clementina HOM05D000513 ORTHO05D003825 4.1e-21 104.8 64 75.0
vmacro20744 Vaccinium macrocarpon HOM05D000513 ORTHO05D003825 5.3e-21 104.4 64 75.0
Manes.02G082800 Manihot esculenta HOM05D000513 ORTHO05D003825 9.1e-21 103.6 64 73.4
Peaxi162Scf00474g00313 Petunia axillaris HOM05D000513 ORTHO05D003825 9.1e-21 103.6 74 64.9
CANSAT80G1561 Cannabis sativa HOM05D000513 ORTHO05D003825 2.0e-20 102.4 55 80.0
HanXRQChr10g0309461 Helianthus annuus HOM05D000513 ORTHO05D003825 2.0e-20 102.4 64 71.9
Potri.018G149500 Populus trichocarpa HOM05D000513 ORTHO05D003825 2.6e-20 102.1 64 73.4
Sabra18G0126300 Salix brachista HOM05D000513 ORTHO05D003825 2.6e-20 102.1 64 73.4
AagrBONN_evm.TU.Sc2ySwM_344.145 Anthoceros agrestis HOM05D000513 ORTHO05D003825 1.0e-19 100.1 66 68.2
Lsat_1_v5_gn_5_81081 Lactuca sativa HOM05D000513 ORTHO05D003825 1.0e-19 100.1 72 62.5
Hund03216 Selenicereus undatus HOM05D000513 ORTHO05D003825 1.0e-19 100.1 62 72.6
ATR0626G157 Amborella trichopoda HOM05D000513 ORTHO05D003825 1.3e-19 99.8 55 80.0
Mapoly0065s0020 Marchantia polymorpha HOM05D000513 ORTHO05D003825 2.2e-19 99.0 55 78.2
Ah.11g043540 Amaranthus hybridus HOM05D000513 ORTHO05D003825 3.8e-19 98.2 57 78.9
AUR62020744 Chenopodium quinoa HOM05D000513 ORTHO05D003825 6.5e-19 97.4 64 70.3
SMO364G0449 Selaginella moellendorffii HOM05D000513 ORTHO05D003825 1.1e-18 96.7 55 76.4
EL10Ac2g03611 Beta vulgaris HOM05D000513 ORTHO05D003825 1.4e-18 96.3 55 80.0
AUR62027969 Chenopodium quinoa HOM05D000513 ORTHO05D003825 1.4e-18 96.3 64 70.3
unitig_26.g9124 Utricularia gibba HOM05D000513 ORTHO05D003825 3.2e-18 95.1 55 76.4
PRCOL_00002119 Prasinoderma coloniale HOM05D000513 ORTHO05D003825 7.0e-13 77.4 68 57.4
MCO09G471 Micromonas commoda HOM05D000513 ORTHO05D003825 2.2e-11 72.4 59 59.3
Cre16.g665800 Chlamydomonas reinhardtii HOM05D000513 ORTHO05D003825 2.9e-11 72.0 51 62.7
Prupe.6G144700 Prunus persica HOM05D000513 ORTHO05D003825 4.0e-08 61.6 40 72.5
FAN17G2564 Fragaria x ananassa HOM05D000513 ORTHO05D003825 5.2e-08 61.2 38 73.7
FAN22G1643 Fragaria x ananassa HOM05D000513 ORTHO05D003825 6.7e-08 60.8 46 63.0
Haze_21254 Corylus avellana HOM05D000513 ORTHO05D003825 8.8e-08 60.5 46 60.9
DCAR_020450 Daucus carota HOM05D000513 ORTHO05D003825 1.5e-07 59.7 31 83.9


User provided reference genes

Program Settings