Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021040 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.8e-75 285.8 144 100.0
CSS0002049 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.0e-49 200.3 139 79.1
CSS0016345 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.0e-49 200.3 139 79.1
CSS0049550 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.0e-49 200.3 139 79.1
CSS0025161 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 5.6e-48 194.5 139 77.0
Hund22263 Selenicereus undatus HOM05D005136 ORTHO05D006619 1.1e-43 180.3 138 73.9
Dinv23543 Davidia involucrata HOM05D005136 ORTHO05D006619 3.2e-43 178.7 139 72.7
Sc09g0004050 Simmondsia chinensis HOM05D005136 ORTHO05D006619 4.1e-43 178.3 141 70.2
vmacro08119 Vaccinium macrocarpon HOM05D005136 ORTHO05D006619 4.1e-43 178.3 139 71.9
Rhsim11G0174400 Rhododendron simsii HOM05D005136 ORTHO05D006619 3.5e-42 175.3 139 71.2
Duzib132G0024 Durio zibethinus HOM05D005136 ORTHO05D006619 3.9e-41 171.8 137 69.3
Dinv42084 Davidia involucrata HOM05D005136 ORTHO05D006619 5.0e-41 171.4 139 71.2
Atru.chr8.1229 Acer truncatum HOM05D005136 ORTHO05D006619 1.9e-40 169.5 138 71.0
MD05G1068400 Malus domestica HOM05D005136 ORTHO05D006619 2.5e-40 169.1 138 67.4
COL.COLO4_32439 Corchorus olitorius HOM05D005136 ORTHO05D006619 3.3e-40 168.7 138 69.6
Nn1g02125 Nelumbo nucifera HOM05D005136 ORTHO05D006619 3.3e-40 168.7 139 68.3
EL10Ac9g21088 Beta vulgaris HOM05D005136 ORTHO05D006619 5.6e-40 167.9 148 64.9
MD10G1078600 Malus domestica HOM05D005136 ORTHO05D006619 5.6e-40 167.9 138 67.4
Thecc.02G123900 Theobroma cacao HOM05D005136 ORTHO05D006619 5.6e-40 167.9 139 68.3
Ah.01g016850 Amaranthus hybridus HOM05D005136 ORTHO05D006619 7.3e-40 167.5 138 68.1
Cfa005022 Carpinus fangiana HOM05D005136 ORTHO05D006619 7.3e-40 167.5 139 69.1
Haze_02365 Corylus avellana HOM05D005136 ORTHO05D006619 7.3e-40 167.5 139 69.1
Lj5P199T42 Lonicera japonica HOM05D005136 ORTHO05D006619 7.3e-40 167.5 136 69.1
FvH4_2g08450 Fragaria vesca HOM05D005136 ORTHO05D006619 9.5e-40 167.2 139 66.9
FAN24G0166 Fragaria x ananassa HOM05D005136 ORTHO05D006619 9.5e-40 167.2 139 66.9
RcHm_v2.0_Chr6g0263731 Rosa chinensis HOM05D005136 ORTHO05D006619 9.5e-40 167.2 139 66.9
FAN27G1698 Fragaria x ananassa HOM05D005136 ORTHO05D006619 1.6e-39 166.4 139 66.9
FAN15G2434 Fragaria x ananassa HOM05D005136 ORTHO05D006619 2.1e-39 166.0 139 66.2
Gohir.A12G017900 Gossypium hirsutum HOM05D005136 ORTHO05D006619 3.6e-39 165.2 139 68.3
Gohir.D12G018500 Gossypium hirsutum HOM05D005136 ORTHO05D006619 3.6e-39 165.2 139 68.3
Gorai.008G018800 Gossypium raimondii HOM05D005136 ORTHO05D006619 3.6e-39 165.2 139 68.3
MBI16_g37741_MAGBIO Magnolia biondii HOM05D005136 ORTHO05D006619 3.6e-39 165.2 138 71.0
Oeu014338.1 Olea europaea HOM05D005136 ORTHO05D006619 3.6e-39 165.2 141 66.0
TAR628G0554 Trochodendron aralioides HOM05D005136 ORTHO05D006619 3.6e-39 165.2 139 68.3
TAR628G1226 Trochodendron aralioides HOM05D005136 ORTHO05D006619 3.6e-39 165.2 139 68.3
Potri.004G152700 Populus trichocarpa HOM05D005136 ORTHO05D006619 6.2e-39 164.5 140 67.9
Cc02_g20820 Coffea canephora HOM05D005136 ORTHO05D006619 8.1e-39 164.1 144 68.1
Prupe.8G100500 Prunus persica HOM05D005136 ORTHO05D006619 8.1e-39 164.1 138 68.1
QL11p043069 Quercus lobata HOM05D005136 ORTHO05D006619 1.1e-38 163.7 137 67.9
Nitab4.5_0009564g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 1.8e-38 162.9 141 66.7
TAR625G1013 Trochodendron aralioides HOM05D005136 ORTHO05D006619 1.8e-38 162.9 139 68.3
Cpa.g.sc31.66 Carica papaya HOM05D005136 ORTHO05D006619 4.0e-38 161.8 139 66.2
AUR62038311 Chenopodium quinoa HOM05D005136 ORTHO05D006619 5.2e-38 161.4 138 65.9
Ciclev10029521m.g Citrus clementina HOM05D005136 ORTHO05D006619 5.2e-38 161.4 139 68.3
Hma1.2p1_1375F.1_g278970 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 6.8e-38 161.0 140 67.1
Hma1.2p1_3179F.1_g333696 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 6.8e-38 161.0 140 67.1
Cc02_g17760 Coffea canephora HOM05D005136 ORTHO05D006619 8.9e-38 160.6 139 69.1
SGA_v2.0_scaffold106G30693 Striga asiatica HOM05D005136 ORTHO05D006619 8.9e-38 160.6 139 66.2
SalBow6G6037 Salvia bowleyana HOM05D005136 ORTHO05D006619 1.2e-37 160.2 141 65.2
Migut.B00252 Erythranthe guttata HOM05D005136 ORTHO05D006619 2.0e-37 159.5 139 65.5
DCAR_026977 Daucus carota HOM05D005136 ORTHO05D006619 3.4e-37 158.7 139 65.5
Sed0024996 Sechium edule HOM05D005136 ORTHO05D006619 3.4e-37 158.7 140 65.7
AUR62023928 Chenopodium quinoa HOM05D005136 ORTHO05D006619 5.8e-37 157.9 138 64.5
Peaxi162Scf00346g00043 Petunia axillaris HOM05D005136 ORTHO05D006619 5.8e-37 157.9 139 65.5
PSO700G0271 Papaver somniferum HOM05D005136 ORTHO05D006619 7.5e-37 157.5 139 64.7
CiPaw.05G062700 Carya illinoinensis HOM05D005136 ORTHO05D006619 1.3e-36 156.8 139 66.2
ClCG11G004520 Citrullus lanatus HOM05D005136 ORTHO05D006619 1.3e-36 156.8 140 65.0
CsaV3_2G014570 Cucumis sativus L. HOM05D005136 ORTHO05D006619 1.7e-36 156.4 140 66.4
Eucgr.G00447 Eucalyptus grandis HOM05D005136 ORTHO05D006619 1.7e-36 156.4 139 63.3
Aqoxy5G01670 Aquilegia oxysepala HOM05D005136 ORTHO05D006619 2.2e-36 156.0 142 64.8
CAN.G1312.12 Capsicum annuum HOM05D005136 ORTHO05D006619 2.2e-36 156.0 139 65.5
MELO3C020986.2 Cucumis melo HOM05D005136 ORTHO05D006619 2.2e-36 156.0 140 66.4
ATR1120G109 Amborella trichopoda HOM05D005136 ORTHO05D006619 2.9e-36 155.6 142 62.7
Solyc08g078240.4 Solanum lycopersicum HOM05D005136 ORTHO05D006619 6.4e-36 154.5 140 65.0
Manes.17G099700 Manihot esculenta HOM05D005136 ORTHO05D006619 1.1e-35 153.7 140 65.7
CiPaw.06G136800 Carya illinoinensis HOM05D005136 ORTHO05D006619 1.4e-35 153.3 139 64.0
Nn1g05055 Nelumbo nucifera HOM05D005136 ORTHO05D006619 1.9e-35 152.9 140 62.1
Sopen08g026750 Solanum pennellii HOM05D005136 ORTHO05D006619 2.4e-35 152.5 140 64.3
PGSC0003DMG400026262 Solanum tuberosum HOM05D005136 ORTHO05D006619 2.4e-35 152.5 140 64.3
Glyma.04G123300 Glycine max HOM05D005136 ORTHO05D006619 4.1e-35 151.8 140 63.6
HanXRQChr05g0152051 Helianthus annuus HOM05D005136 ORTHO05D006619 4.1e-35 151.8 140 64.3
MSTRG.16796 Avicennia marina HOM05D005136 ORTHO05D006619 5.4e-35 151.4 139 63.3
VMungo1215G0362 Vigna mungo HOM05D005136 ORTHO05D006619 5.4e-35 151.4 140 62.1
Phvul.002G127500 Phaseolus vulgaris HOM05D005136 ORTHO05D006619 9.2e-35 150.6 140 62.9
Lj3g0003138 Lotus japonicus HOM05D005136 ORTHO05D006619 1.2e-34 150.2 139 63.3
TWI31G0294 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 7.8e-34 147.5 145 62.8
Gorai.005G228100 Gossypium raimondii HOM05D005136 ORTHO05D006619 1.3e-33 146.7 134 63.4
TWI79G0765 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 1.7e-33 146.4 145 61.4
HPP92_013432 Vanilla planifolia HOM05D005136 ORTHO05D006619 1.7e-33 146.4 145 61.4
HPP92_027116 Vanilla planifolia HOM05D005136 ORTHO05D006619 1.7e-33 146.4 145 61.4
CANSAT11G0677 Cannabis sativa HOM05D005136 ORTHO05D006619 2.3e-33 146.0 148 60.1
Glyma.09G214900 Glycine max HOM05D005136 ORTHO05D006619 3.9e-33 145.2 139 61.9
Gohir.A03G179300 Gossypium hirsutum HOM05D005136 ORTHO05D006619 3.9e-33 145.2 134 62.7
Gohir.D02G202838 Gossypium hirsutum HOM05D005136 ORTHO05D006619 6.6e-33 144.4 134 62.7
AL1G22940 Arabidopsis lyrata HOM05D005136 ORTHO05D006619 8.6e-33 144.1 147 58.5
Lalb_Chr19g0138591 Lupinus albus HOM05D005136 ORTHO05D006619 4.3e-32 141.7 140 58.6
AT1G11760 Arabidopsis thaliana HOM05D005136 ORTHO05D006619 5.6e-32 141.4 146 57.5
CARHR012080 Cardamine hirsuta HOM05D005136 ORTHO05D006619 5.6e-32 141.4 145 58.6
Lsat_1_v5_gn_7_89621 Lactuca sativa HOM05D005136 ORTHO05D006619 5.6e-32 141.4 140 61.4
THA.LOC104823526 Tarenaya hassleriana HOM05D005136 ORTHO05D006619 5.6e-32 141.4 143 56.6
Lalb_Chr23g0265461 Lupinus albus HOM05D005136 ORTHO05D006619 7.3e-32 141.0 140 56.4
PGR042G3747 Punica granatum HOM05D005136 ORTHO05D006619 7.3e-32 141.0 140 61.4
Aa31LG1G2990 Aethionema arabicum HOM05D005136 ORTHO05D006619 9.5e-32 140.6 142 57.0
BolC8t49124H Brassica oleracea HOM05D004968 ORTHO05D005922 9.5e-32 140.6 146 56.2
Sp1g10380 Schrenkiella parvula HOM05D005136 ORTHO05D006619 1.2e-31 140.2 146 57.5
Psat5g007800 Pisum sativum HOM05D005136 ORTHO05D006619 1.6e-31 139.8 141 61.0
Psat5g103000 Pisum sativum HOM05D005136 ORTHO05D006619 2.1e-31 139.4 141 61.0
C08p14950 Brassica napus HOM05D004968 ORTHO05D005922 2.8e-31 139.0 146 55.5
Ca_15377_v3 Cicer arietinum L. HOM05D005136 ORTHO05D006619 2.8e-31 139.0 140 60.0
Carub.0001s1142 Capsella rubella HOM05D005136 ORTHO05D006619 4.7e-31 138.3 147 57.1
Medtr3g116260 Medicago truncatula HOM05D005136 ORTHO05D006619 4.7e-31 138.3 142 59.2
BcaB03g13232 Brassica carinata HOM05D005136 ORTHO05D006619 6.2e-31 137.9 145 56.6
Thhalv10008721m.g Eutrema salsugineum HOM05D005136 ORTHO05D006619 1.1e-30 137.1 150 55.3
A08p33240 Brassica napus HOM05D004968 ORTHO05D005922 9.9e-29 130.6 138 55.8
BraA08t35243Z Brassica rapa HOM05D004968 ORTHO05D005922 9.9e-29 130.6 138 55.8
EL10Ac7g17776 Beta vulgaris HOM05D005136 ORTHO05D006619 9.2e-27 124.0 146 52.7
Prupe.5G020100 Prunus persica HOM05D005136 ORTHO05D006619 1.2e-26 123.6 145 51.7
Actinidia00512 Actinidia chinensis HOM05D005136 ORTHO05D006619 2.7e-26 122.5 115 64.3
unitig_37.g12818 Utricularia gibba HOM05D005136 ORTHO05D006619 3.9e-25 118.6 145 53.1
PSO170G5319 Papaver somniferum HOM05D005136 ORTHO05D006619 1.5e-24 116.7 101 63.4
Os10g0548400 Oryza sativa ssp. japonica HOM05D005136 ORTHO05D006619 2.5e-24 115.9 123 57.7
TPR.G21542 Trifolium pratense HOM05D005136 ORTHO05D006619 1.2e-23 113.6 133 54.1
ECA236G0931 Erigeron canadensis HOM05D005136 ORTHO05D006619 1.6e-23 113.2 139 52.5
Zm00001eb284000 Zea mays HOM05D005136 ORTHO05D006619 2.8e-23 112.5 134 53.0
Nitab4.5_0002601g0030 Nicotiana tabacum HOM05D005136 ORTHO05D006619 3.6e-23 112.1 110 64.5
BcaB08g37416 Brassica carinata HOM05D005136 ORTHO05D006619 3.1e-22 109.0 138 52.2
EL10Ac1g02225 Beta vulgaris HOM05D005136 ORTHO05D006619 5.8e-21 104.8 152 46.1
SalBow6G1117 Salvia bowleyana HOM05D005136 ORTHO05D006619 2.9e-20 102.4 107 60.7
RcHm_v2.0_Chr6g0264001 Rosa chinensis HOM05D005136 ORTHO05D006619 5.4e-19 98.2 68 76.5
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 1.0e-17 94.0 132 43.9
Pp3c10_12480 Physcomitrium patens HOM05D005136 ORTHO05D006619 1.3e-17 93.6 135 44.4
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 3.0e-17 92.4 132 43.2
Hma1.2p1_0854F.1_g228935 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 3.9e-17 92.0 67 73.1
Hma1.2p1_2665F.1_g326510 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 3.9e-17 92.0 67 73.1
CDE02G3080 Ceratophyllum demersum HOM05D005136 ORTHO05D006619 2.5e-16 89.4 67 73.1
Mapoly0003s0019 Marchantia polymorpha HOM05D005136 ORTHO05D006619 9.6e-16 87.4 138 43.5
SMO174G0113 Selaginella moellendorffii HOM05D005136 ORTHO05D006619 9.6e-16 87.4 129 42.6
SHI23962 Sapria himalayana HOM05D005136 ORTHO05D006619 1.6e-15 86.7 125 48.0
Atru.chr5.2947 Acer truncatum HOM05D005136 ORTHO05D006619 4.8e-15 85.1 85 60.0
Sc09g0004030 Simmondsia chinensis HOM05D005136 ORTHO05D006619 1.1e-14 84.0 132 41.7
Psat4g095600 Pisum sativum HOM05D005136 ORTHO05D006619 4.0e-14 82.0 70 62.9
Thecc.02G123800 Theobroma cacao HOM05D005136 ORTHO05D006619 9.0e-14 80.9 67 64.2
Medtr3g116310 Medicago truncatula HOM05D005136 ORTHO05D006619 2.0e-13 79.7 68 63.2
COL.COLO4_32440 Corchorus olitorius HOM05D005136 ORTHO05D006619 3.4e-13 79.0 67 58.2
Oeu014337.1 Olea europaea HOM05D005136 ORTHO05D006619 3.4e-13 79.0 67 58.2
Sp2g23220 Schrenkiella parvula HOM05D005136 ORTHO05D006619 3.4e-13 79.0 68 64.7
Lj4g0027023 Lotus japonicus HOM05D005136 ORTHO05D006619 9.9e-13 77.4 132 41.7
Gohir.A03G179400 Gossypium hirsutum HOM05D005136 ORTHO05D006619 4.9e-12 75.1 68 58.8
Gorai.005G228200 Gossypium raimondii HOM05D005136 ORTHO05D006619 6.4e-12 74.7 68 58.8
Gohir.D02G202857 Gossypium hirsutum HOM05D005136 ORTHO05D006619 8.4e-12 74.3 68 57.4
Nitab4.5_0012262g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 1.0e-09 67.4 66 54.5
Nitab4.5_0002541g0070 Nicotiana tabacum HOM05D005136 ORTHO05D024799 1.8e-09 66.6 66 54.5
AagrBONN_evm.TU.Sc2ySwM_369.532 Anthoceros agrestis HOM05D005136 ORTHO05D006619 1.1e-08 63.9 137 32.8
Os07g0229100 Oryza sativa ssp. japonica HOM05D011003 ORTHO05D012370 4.3e-08 62.0 101 39.6
CAN.G1435.13 Capsicum annuum HOM05D005136 ORTHO05D024799 4.8e-07 58.5 66 48.5


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