Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0021026 Camellia sinensis var. sinensis HOM05D007505 ORTHO05D009476 3.4e-65 251.5 127 100.0
Actinidia19362 Actinidia chinensis HOM05D007505 ORTHO05D009476 3.3e-36 155.2 126 67.5
Dinv38525 Davidia involucrata HOM05D007505 ORTHO05D009476 3.4e-33 145.2 127 65.4
Ciclev10022689m.g Citrus clementina HOM05D007505 ORTHO05D009476 4.5e-33 144.8 128 61.7
Hma1.2p1_0046F.1_g027150 Hydrangea macrophylla HOM05D007505 ORTHO05D009476 2.2e-32 142.5 129 61.2
vmacro19295 Vaccinium macrocarpon HOM05D007505 ORTHO05D009476 1.9e-31 139.4 132 62.9
Aqoxy5G03745 Aquilegia oxysepala HOM05D007505 ORTHO05D009476 7.1e-31 137.5 124 59.7
Nitab4.5_0010452g0040 Nicotiana tabacum HOM05D002460 ORTHO05D002716 7.1e-31 137.5 120 59.2
Oeu023645.1 Olea europaea HOM05D007505 ORTHO05D009476 7.1e-31 137.5 118 62.7
Rhsim08G0177900 Rhododendron simsii HOM05D007505 ORTHO05D009476 1.2e-30 136.7 132 61.4
FvH4_5g06310 Fragaria vesca HOM05D007505 ORTHO05D009476 1.6e-30 136.3 129 58.9
FAN18G1005 Fragaria x ananassa HOM05D007505 ORTHO05D009476 3.5e-30 135.2 129 58.9
Rhsim12G0168000 Rhododendron simsii HOM05D007505 ORTHO05D009476 3.5e-30 135.2 117 60.7
FAN08G0495 Fragaria x ananassa HOM05D007505 ORTHO05D009476 4.6e-30 134.8 129 58.9
Peaxi162Scf00089g01341 Petunia axillaris HOM05D002460 ORTHO05D002716 4.6e-30 134.8 129 56.6
Haze_07589 Corylus avellana HOM05D007505 ORTHO05D009476 1.0e-29 133.7 126 56.3
RcHm_v2.0_Chr7g0192551 Rosa chinensis HOM05D007505 ORTHO05D009476 1.0e-29 133.7 126 59.5
Cfa019221 Carpinus fangiana HOM05D007505 ORTHO05D009476 3.9e-29 131.7 129 56.6
FAN13G2123 Fragaria x ananassa HOM05D007505 ORTHO05D009476 5.1e-29 131.3 129 58.1
Potri.015G084200 Populus trichocarpa HOM05D007505 ORTHO05D009476 5.1e-29 131.3 127 55.9
TAR371G0969 Trochodendron aralioides HOM05D007505 ORTHO05D009476 1.1e-28 130.2 124 58.1
Cfa019219 Carpinus fangiana HOM05D007505 ORTHO05D009476 3.3e-28 128.6 129 55.8
Lalb_Chr12g0201901 Lupinus albus HOM05D007505 ORTHO05D009476 3.3e-28 128.6 128 56.2
Cc04_g11490 Coffea canephora HOM05D007505 ORTHO05D009476 7.4e-28 127.5 124 54.0
ClCG03G003000 Citrullus lanatus HOM05D007505 ORTHO05D009476 1.6e-27 126.3 122 56.6
Thecc.03G026000 Theobroma cacao HOM05D007505 ORTHO05D009476 1.6e-27 126.3 126 54.8
Atru.chr9.2580 Acer truncatum HOM05D007505 ORTHO05D009476 2.1e-27 125.9 132 54.5
PGSC0003DMG400018186 Solanum tuberosum HOM05D007505 ORTHO05D009476 2.8e-27 125.6 125 56.0
TWI23G0126 Tripterygium wilfordii HOM05D007505 ORTHO05D009476 2.8e-27 125.6 123 56.9
Cpa.g.sc159.18 Carica papaya HOM05D007505 ORTHO05D009476 4.8e-27 124.8 128 54.7
COL.COLO4_36758 Corchorus olitorius HOM05D007505 ORTHO05D009476 4.8e-27 124.8 139 54.7
MELO3C002298.2 Cucumis melo HOM05D007505 ORTHO05D009476 8.2e-27 124.0 126 54.8
Sabra15G0107300 Salix brachista HOM05D007505 ORTHO05D009476 8.2e-27 124.0 128 54.7
Sopen03g031290 Solanum pennellii HOM05D007505 ORTHO05D009476 8.2e-27 124.0 125 56.0
Migut.O00159 Erythranthe guttata HOM05D007505 ORTHO05D009476 1.4e-26 123.2 140 50.0
QL10p006874 Quercus lobata HOM05D007505 ORTHO05D009476 1.4e-26 123.2 125 54.4
CAN.G338.34 Capsicum annuum HOM05D007505 ORTHO05D009476 1.8e-26 122.9 124 55.6
Solyc03g112190.4 Solanum lycopersicum HOM05D002460 ORTHO05D002716 1.8e-26 122.9 125 55.2
Oeu040858.1 Olea europaea HOM05D007505 ORTHO05D009476 2.4e-26 122.5 117 53.8
Prupe.5G165400 Prunus persica HOM05D007505 ORTHO05D009476 3.1e-26 122.1 128 54.7
Nitab4.5_0001793g0050 Nicotiana tabacum HOM05D002460 ORTHO05D002716 6.9e-26 120.9 106 61.3
Glyma.17G084500 Glycine max HOM05D007505 ORTHO05D009476 2.6e-25 119.0 132 50.8
Sed0000715 Sechium edule HOM05D007505 ORTHO05D009476 4.5e-25 118.2 124 53.2
Gorai.003G115400 Gossypium raimondii HOM05D007505 ORTHO05D009476 5.8e-25 117.9 140 49.3
Duzib205G0367 Durio zibethinus HOM05D007505 ORTHO05D009476 7.6e-25 117.5 99 62.6
Gohir.D03G109300 Gossypium hirsutum HOM05D007505 ORTHO05D009476 7.6e-25 117.5 140 49.3
Manes.06G110400 Manihot esculenta HOM05D007505 ORTHO05D009476 7.6e-25 117.5 127 55.1
VMungo1215G0926 Vigna mungo HOM05D007505 ORTHO05D009476 7.6e-25 117.5 123 53.7
Gohir.A03G057100 Gossypium hirsutum HOM05D007505 ORTHO05D009476 1.0e-24 117.1 140 49.3
DCAR_021591 Daucus carota HOM05D007505 ORTHO05D009476 1.3e-24 116.7 134 50.0
ECA247G3499 Erigeron canadensis HOM05D007505 ORTHO05D009476 1.3e-24 116.7 133 54.9
Nitab4.5_0000003g0840 Nicotiana tabacum HOM05D007505 ORTHO05D009476 2.2e-24 115.9 122 53.3
EL10Ac5g10655 Beta vulgaris HOM05D007505 ORTHO05D009476 2.9e-24 115.5 146 49.3
SGA_v2.0_scaffold90G27839 Striga asiatica HOM05D007505 ORTHO05D009476 2.9e-24 115.5 125 53.6
PGR083G2149 Punica granatum HOM05D007505 ORTHO05D009476 3.8e-24 115.2 125 52.0
MD06G1165700 Malus domestica HOM05D007505 ORTHO05D009476 8.4e-24 114.0 122 51.6
MD14G1171300 Malus domestica HOM05D007505 ORTHO05D009476 8.4e-24 114.0 130 53.8
Medtr4g104870 Medicago truncatula HOM05D007505 ORTHO05D009476 8.4e-24 114.0 130 50.8
Glyma.05G041700 Glycine max HOM05D007505 ORTHO05D009476 1.1e-23 113.6 123 51.2
Lsat_1_v5_gn_1_27760 Lactuca sativa HOM05D007505 ORTHO05D009476 1.1e-23 113.6 131 51.9
Nitab4.5_0008713g0030 Nicotiana tabacum HOM05D007505 ORTHO05D009476 1.1e-23 113.6 111 55.9
SalBow5G2951 Salvia bowleyana HOM05D007505 ORTHO05D009476 1.4e-23 113.2 112 55.4
HanXRQChr02g0035811 Helianthus annuus HOM05D007505 ORTHO05D009476 1.9e-23 112.8 127 52.0
CANSAT80G2368 Cannabis sativa HOM05D007505 ORTHO05D009476 2.5e-23 112.5 149 47.7
Psat4g060840 Pisum sativum HOM05D007505 ORTHO05D009476 2.5e-23 112.5 126 51.6
PSO675G7842 Papaver somniferum HOM05D007505 ORTHO05D009476 4.2e-23 111.7 136 50.7
AUR62028725 Chenopodium quinoa HOM05D007505 ORTHO05D009476 5.5e-23 111.3 122 53.3
TPR.G37551 Trifolium pratense HOM05D007505 ORTHO05D009476 5.5e-23 111.3 126 52.4
Eucgr.B00218 Eucalyptus grandis HOM05D007505 ORTHO05D009476 7.1e-23 110.9 135 49.6
PSO541G6268 Papaver somniferum HOM05D007505 ORTHO05D009476 1.2e-22 110.2 136 47.8
Phvul.003G205200 Phaseolus vulgaris HOM05D007505 ORTHO05D009476 1.2e-22 110.2 95 56.8
Potri.012G086000 Populus trichocarpa HOM05D007505 ORTHO05D009476 1.2e-22 110.2 126 51.6
Lj4g0014699 Lotus japonicus HOM05D007505 ORTHO05D009476 1.6e-22 109.8 134 48.5
CsaV3_1G008840 Cucumis sativus L. HOM05D007505 ORTHO05D009476 2.1e-22 109.4 124 49.2
AUR62008143 Chenopodium quinoa HOM05D007505 ORTHO05D009476 4.6e-22 108.2 122 50.8
TAR629G2155 Trochodendron aralioides HOM05D001124 ORTHO05D001004 4.6e-22 108.2 94 62.8
CiPaw.11G019500 Carya illinoinensis HOM05D007505 ORTHO05D009476 6.0e-22 107.8 129 52.7
Potri.012G086300 Populus trichocarpa HOM05D007505 ORTHO05D009476 6.0e-22 107.8 117 52.1
Sabra12G0061800 Salix brachista HOM05D007505 ORTHO05D009476 2.3e-21 105.9 116 51.7
arahy.Tifrunner.gnm1.ann1.33YNZL Arachis hypogaea HOM05D007505 ORTHO05D009476 3.0e-21 105.5 140 47.9
Dinv20598 Davidia involucrata HOM05D007505 ORTHO05D009476 3.3e-20 102.1 70 72.9
Nn4g22591 Nelumbo nucifera HOM05D007505 ORTHO05D009476 4.3e-20 101.7 115 54.8
Sc04g0001500 Simmondsia chinensis HOM05D007505 ORTHO05D009476 5.7e-20 101.3 89 60.7
Nn3g16691 Nelumbo nucifera HOM05D007505 ORTHO05D009476 2.2e-19 99.4 114 50.9
MBI16_g31776_MAGBIO Magnolia biondii HOM05D007505 ORTHO05D009476 1.8e-18 96.3 124 46.8
ATR0824G199 Amborella trichopoda HOM05D007505 ORTHO05D009476 9.0e-18 94.0 107 54.2
BcaNung07358 Brassica carinata HOM05D007505 ORTHO05D009476 2.2e-16 89.4 132 43.2
Hma1.2p1_1092F.1_g255960 Hydrangea macrophylla HOM05D007505 ORTHO05D009476 8.5e-16 87.4 79 57.0
AL7G28500 Arabidopsis lyrata HOM05D007505 ORTHO05D009476 1.1e-15 87.0 113 45.1
Carub.0007s1636 Capsella rubella HOM05D007505 ORTHO05D009476 1.4e-15 86.7 114 43.9
C01p20030 Brassica napus HOM05D006209 ORTHO05D007645 5.5e-15 84.7 118 44.9
unitig_61.g26472 Utricularia gibba HOM05D007505 ORTHO05D009476 5.5e-15 84.7 117 44.4
BcaC09g50839 Brassica carinata HOM05D007505 ORTHO05D009476 7.2e-15 84.3 118 44.9
A01p16040 Brassica napus HOM05D006209 ORTHO05D007645 7.2e-15 84.3 118 44.9
BraA01t01538Z Brassica rapa HOM05D007505 ORTHO05D009476 1.2e-14 83.6 118 44.9
AT4G24700 Arabidopsis thaliana HOM05D007505 ORTHO05D009476 1.6e-14 83.2 116 44.8
BolC1t01930H Brassica oleracea HOM05D006209 ORTHO05D007645 4.6e-14 81.6 118 44.1
Duzib068G0261 Durio zibethinus HOM05D007505 ORTHO05D009476 7.9e-14 80.9 69 59.4
Thhalv10026466m.g Eutrema salsugineum HOM05D007505 ORTHO05D009476 7.9e-14 80.9 118 42.4
THA.LOC104825178 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 3.9e-13 78.6 137 41.6
THA.LOC104800396 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 5.1e-13 78.2 136 40.4
THA.LOC104800397 Tarenaya hassleriana HOM05D007505 ORTHO05D009476 5.1e-13 78.2 136 40.4
CARHR232080 Cardamine hirsuta HOM05D007505 ORTHO05D009476 2.8e-11 72.4 115 42.6
BolC7t45867H Brassica oleracea HOM05D000464 ORTHO05D000408 3.7e-11 72.0 115 40.0
BraA03t14621Z Brassica rapa HOM05D000464 ORTHO05D000408 3.7e-11 72.0 124 39.5
A03p55480 Brassica napus HOM05D007505 ORTHO05D009476 5.3e-10 68.2 115 39.1
HPP92_004606 Vanilla planifolia HOM05D007505 ORTHO05D009476 3.4e-09 65.5 88 45.5
Os02g0595200 Oryza sativa ssp. japonica HOM05D007505 ORTHO05D009476 2.5e-07 59.3 152 32.9
Zm00001eb246040 Zea mays HOM05D007505 ORTHO05D009476 7.2e-07 57.8 133 35.3
BcaC06g32867 Brassica carinata HOM05D007505 ORTHO05D009476 4.7e-06 55.1 108 37.0


User provided reference genes

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