Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020926 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 0.0e+00 1094.0 525 100.0
CSS0020951 Camellia sinensis var. sinensis HOM05D004979 ORTHO05D006190 0.0e+00 1092.0 525 99.6
Actinidia22849 Actinidia chinensis HOM05D004979 ORTHO05D006190 8.5e-272 939.9 520 85.4
Rhsim01G0213000 Rhododendron simsii HOM05D004979 ORTHO05D006190 2.2e-267 925.2 525 84.6
Oeu061912.1 Olea europaea HOM05D004979 ORTHO05D006190 1.8e-261 905.6 524 80.3
Cc02_g36050 Coffea canephora HOM05D004979 ORTHO05D006190 1.0e-256 889.8 522 77.6
Cc02_g36100 Coffea canephora HOM05D004979 ORTHO05D006190 2.3e-256 888.6 522 77.6
MSTRG.16439 Avicennia marina HOM05D004979 ORTHO05D006190 1.5e-255 885.9 524 77.9
Migut.B00894 Erythranthe guttata HOM05D004979 ORTHO05D006190 4.4e-252 874.4 521 77.4
Dinv24526 Davidia involucrata HOM05D004979 ORTHO05D006190 3.9e-248 861.3 520 78.7
RcHm_v2.0_Chr1g0332651 Rosa chinensis HOM05D004979 ORTHO05D006190 1.4e-245 852.8 518 75.9
MD08G1246100 Malus domestica HOM05D004979 ORTHO05D006190 1.8e-245 852.4 514 77.2
Manes.08G106500 Manihot esculenta HOM05D004979 ORTHO05D006190 1.2e-244 849.7 518 76.3
FAN01G0279 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.5e-244 849.4 516 76.2
Atru.chr12.1512 Acer truncatum HOM05D004979 ORTHO05D006190 1.7e-243 845.9 518 75.9
PGSC0003DMG400001886 Solanum tuberosum HOM05D004979 ORTHO05D006190 2.2e-243 845.5 513 76.8
QL03p011287 Quercus lobata HOM05D004979 ORTHO05D006190 8.3e-243 843.6 527 74.6
PGR004G0062 Punica granatum HOM05D004979 ORTHO05D006190 1.4e-242 842.8 517 75.0
PGR117G0001 Punica granatum HOM05D004979 ORTHO05D006190 2.4e-242 842.0 520 75.0
CAN.G756.6 Capsicum annuum HOM05D004979 ORTHO05D006190 4.1e-242 841.3 513 75.8
Sed0004859 Sechium edule HOM05D004979 ORTHO05D006190 1.2e-241 839.7 520 75.8
MD15G1441300 Malus domestica HOM05D004979 ORTHO05D006190 2.1e-241 839.0 514 76.3
EL10Ac8g20414 Beta vulgaris HOM05D004979 ORTHO05D006190 6.0e-241 837.4 522 73.4
Potri.013G000600 Populus trichocarpa HOM05D004979 ORTHO05D006190 7.8e-241 837.0 518 75.9
CiPaw.01G000500 Carya illinoinensis HOM05D004979 ORTHO05D006190 1.0e-240 836.6 520 76.2
FAN06G2997 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.0e-240 836.6 538 73.0
Solyc04g055190.4 Solanum lycopersicum HOM05D004979 ORTHO05D006190 1.0e-240 836.6 513 75.8
TPR.G18815 Trifolium pratense HOM05D004979 ORTHO05D006190 5.1e-240 834.3 519 73.4
arahy.Tifrunner.gnm1.ann1.4I4LKP Arachis hypogaea HOM05D004979 ORTHO05D006190 3.3e-239 831.6 519 73.2
Ciclev10028175m.g Citrus clementina HOM05D004979 ORTHO05D006190 9.5e-239 830.1 519 74.4
Medtr1g110490 Medicago truncatula HOM05D004979 ORTHO05D006190 1.2e-238 829.7 526 72.6
Lalb_Chr04g0254641 Lupinus albus HOM05D004979 ORTHO05D006190 1.6e-238 829.3 519 72.6
TWI60G1029 Tripterygium wilfordii HOM05D004979 ORTHO05D006190 2.1e-238 828.9 514 74.5
TPR.G33173 Trifolium pratense HOM05D004979 ORTHO05D006190 2.8e-238 828.6 519 72.6
Aqoxy1G02435 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 4.7e-238 827.8 517 74.9
CAN.G1715.7 Capsicum annuum HOM05D004979 ORTHO05D006190 8.1e-238 827.0 513 75.0
Thecc.05G331000 Theobroma cacao HOM05D004979 ORTHO05D006190 1.1e-237 826.6 517 74.5
CANSAT56G2810 Cannabis sativa HOM05D004979 ORTHO05D006190 1.4e-237 826.2 513 74.9
Psat6g226240 Pisum sativum HOM05D004979 ORTHO05D006190 6.8e-237 823.9 517 72.9
Glyma.10G273100 Glycine max HOM05D004979 ORTHO05D006190 1.2e-236 823.2 519 72.8
MELO3C019579.2 Cucumis melo HOM05D004979 ORTHO05D006190 1.5e-236 822.8 518 74.7
vmacro19800 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 2.6e-236 822.0 696 62.1
CsaV3_6G013140 Cucumis sativus L. HOM05D004979 ORTHO05D006190 3.4e-236 821.6 518 75.1
Sabra13G0000500 Salix brachista HOM05D004979 ORTHO05D006190 2.9e-235 818.5 532 72.7
Eucgr.I02672 Eucalyptus grandis HOM05D004979 ORTHO05D006190 8.4e-235 817.0 517 73.1
Glyma.20G116900 Glycine max HOM05D004979 ORTHO05D006190 1.4e-234 816.2 519 71.9
Lj5g0020513 Lotus japonicus HOM05D004979 ORTHO05D006190 1.4e-234 816.2 513 73.1
AL1G67180 Arabidopsis lyrata HOM05D004979 ORTHO05D006190 2.4e-234 815.5 518 69.5
ECA234G3247 Erigeron canadensis HOM05D004979 ORTHO05D006190 5.4e-234 814.3 498 74.7
Hund05397 Selenicereus undatus HOM05D004979 ORTHO05D006190 1.3e-232 809.7 489 75.1
arahy.Tifrunner.gnm1.ann1.Q958TZ Arachis hypogaea HOM05D004979 ORTHO05D006190 3.9e-232 808.1 577 66.4
Thhalv10023409m.g Eutrema salsugineum HOM05D004979 ORTHO05D006190 5.1e-232 807.7 516 69.8
VMungo0720G1588 Vigna mungo HOM05D004979 ORTHO05D006190 8.6e-232 807.0 518 71.4
PSO357G0276 Papaver somniferum HOM05D004979 ORTHO05D006190 4.3e-231 804.7 512 71.5
AT1G57600 Arabidopsis thaliana HOM05D004979 ORTHO05D006190 5.6e-231 804.3 516 68.6
HanXRQChr11g0327151 Helianthus annuus HOM05D004979 ORTHO05D006190 9.6e-231 803.5 483 77.2
PSO170G1924 Papaver somniferum HOM05D004979 ORTHO05D006190 1.6e-230 802.7 512 71.3
CARHR054720 Cardamine hirsuta HOM05D004979 ORTHO05D006190 6.2e-230 800.8 516 69.2
THA.LOC104816839 Tarenaya hassleriana HOM05D004979 ORTHO05D006190 1.4e-229 799.7 514 70.0
Phvul.007G028500 Phaseolus vulgaris HOM05D004979 ORTHO05D006190 1.8e-229 799.3 518 71.2
Carub.0002s0703 Capsella rubella HOM05D004979 ORTHO05D006190 2.0e-228 795.8 519 68.4
Gohir.D13G003600 Gossypium hirsutum HOM05D004979 ORTHO05D006190 1.4e-226 789.6 514 71.0
vmacro22232 Vaccinium macrocarpon HOM05D004979 ORTHO05D006190 4.2e-226 788.1 554 72.0
Gohir.A13G003700 Gossypium hirsutum HOM05D004979 ORTHO05D006190 7.1e-226 787.3 514 70.6
Gorai.013G003500 Gossypium raimondii HOM05D004979 ORTHO05D006190 2.1e-225 785.8 515 71.1
Sp2g05910 Schrenkiella parvula HOM05D004979 ORTHO05D006190 4.6e-225 784.6 517 67.9
SpUn0028_0030 Schrenkiella parvula HOM05D004979 ORTHO05D006190 4.6e-225 784.6 517 67.9
BolC9t55284H Brassica oleracea HOM05D004979 ORTHO05D006190 1.3e-224 783.1 517 68.5
unitig_22.g6127 Utricularia gibba HOM05D004979 ORTHO05D006190 1.3e-224 783.1 563 65.7
BcaC04g22085 Brassica carinata HOM05D004979 ORTHO05D006190 6.6e-224 780.8 517 68.1
Nitab4.5_0000081g0190 Nicotiana tabacum HOM05D004979 ORTHO05D006190 6.6e-224 780.8 516 71.9
BraA09t37507Z Brassica rapa HOM05D004979 ORTHO05D006190 1.3e-222 776.5 517 67.5
BcaB07g31145 Brassica carinata HOM05D004979 ORTHO05D006190 4.8e-222 774.6 517 67.3
SGA_v2.0_scaffold279G46769 Striga asiatica HOM05D004979 ORTHO05D006190 1.1e-221 773.5 521 70.2
Duzib114G0072 Durio zibethinus HOM05D004979 ORTHO05D006190 2.6e-220 768.8 510 71.8
C09p23650 Brassica napus HOM05D004979 ORTHO05D006190 7.6e-220 767.3 541 65.1
Lj4g0015757 Lotus japonicus HOM05D004979 ORTHO05D006190 2.4e-218 762.3 469 73.8
A09p18870 Brassica napus HOM05D004979 ORTHO05D006190 5.4e-218 761.1 542 64.4
AUR62014845 Chenopodium quinoa HOM05D004979 ORTHO05D006190 5.4e-218 761.1 525 69.0
Os05g0144000 Oryza sativa ssp. japonica HOM05D004979 ORTHO05D006190 4.3e-215 751.5 516 66.5
ATR0730G180 Amborella trichopoda HOM05D004979 ORTHO05D006190 1.6e-214 749.6 530 65.1
Peaxi162Scf00212g00515 Petunia axillaris HOM05D004979 ORTHO05D006190 4.8e-214 748.0 517 70.4
Zm00001eb108680 Zea mays HOM05D004979 ORTHO05D006190 1.1e-213 746.9 516 66.3
Aa31LG2G11270 Aethionema arabicum HOM05D004979 ORTHO05D006190 9.9e-212 740.3 521 66.8
TAR636G2920 Trochodendron aralioides HOM05D004979 ORTHO05D006190 1.3e-211 740.0 441 78.9
SEGI_04903 Sequoiadendron giganteum HOM05D004979 ORTHO05D006190 4.0e-205 718.4 524 62.2
Lj9A238G55 Lonicera japonica HOM05D004979 ORTHO05D006190 1.0e-203 713.8 503 69.4
Haze_12430 Corylus avellana HOM05D004979 ORTHO05D006190 1.1e-202 710.3 585 62.1
Sc05g0004380 Simmondsia chinensis HOM05D004979 ORTHO05D006190 1.1e-202 710.3 435 74.7
FAN03G1290 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.0e-200 703.7 580 61.6
FAN23G0202 Fragaria x ananassa HOM05D004979 ORTHO05D006190 3.1e-197 692.2 523 64.6
Lsat_1_v5_gn_5_7121 Lactuca sativa HOM05D004979 ORTHO05D006190 6.9e-197 691.0 500 68.0
Nitab4.5_0002303g0020 Nicotiana tabacum HOM05D004979 ORTHO05D006190 1.5e-196 689.9 516 65.3
Prupe.1G583400 Prunus persica HOM05D004979 ORTHO05D006190 6.5e-195 684.5 402 78.4
FvH4_7g05560 Fragaria vesca HOM05D004979 ORTHO05D006190 1.6e-190 669.8 393 77.1
HPP92_023772 Vanilla planifolia HOM05D004979 ORTHO05D006190 1.1e-178 630.6 420 67.9
Nn7g38157 Nelumbo nucifera HOM05D004979 ORTHO05D006190 2.7e-177 625.9 490 62.7
Mapoly0050s0014 Marchantia polymorpha HOM05D004979 ORTHO05D006190 2.1e-169 599.7 523 53.3
GSVIVG01007211001 Vitis vinifera HOM05D004979 ORTHO05D006190 3.6e-169 599.0 362 78.5
Rhsim04G0165200 Rhododendron simsii HOM05D004979 ORTHO05D006190 2.0e-167 593.2 358 80.7
Pp3c2_38270 Physcomitrium patens HOM05D004979 ORTHO05D006190 9.1e-165 584.3 531 52.5
SalBow5G4822 Salvia bowleyana HOM05D004979 ORTHO05D006190 7.2e-162 574.7 334 79.3
GSVIVG01006954001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.3e-155 553.9 304 85.2
FAN10G2429 Fragaria x ananassa HOM05D004979 ORTHO05D006190 4.2e-154 548.9 516 55.6
SMO145G0201 Selaginella moellendorffii HOM05D004979 ORTHO05D006190 4.2e-154 548.9 504 53.6
DCAR_006591 Daucus carota HOM05D004979 ORTHO05D006190 1.1e-149 534.3 517 54.7
SalBow3G2171 Salvia bowleyana HOM05D004979 ORTHO05D006190 7.7e-148 528.1 350 71.7
Lj5C315T9 Lonicera japonica HOM05D004979 ORTHO05D006190 1.4e-141 507.3 286 83.2
CBR_g16989 Chara braunii HOM05D004979 ORTHO05D006190 5.9e-140 501.9 549 46.1
AagrBONN_evm.TU.Sc2ySwM_344.2018 Anthoceros agrestis HOM05D004979 ORTHO05D006190 2.0e-135 486.9 435 52.4
GSVIVG01002014001 Vitis vinifera HOM05D004979 ORTHO05D006190 2.1e-129 466.8 252 85.7
AUR62017041 Chenopodium quinoa HOM05D004979 ORTHO05D006190 2.0e-127 460.3 345 64.3
Hma1.2p1_0759F.1_g213770 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 1.6e-116 424.1 231 85.7
Hma1.2p1_0759F.1_g213813 Hydrangea macrophylla HOM05D004979 ORTHO05D006190 1.6e-116 424.1 231 85.7
COL.COLO4_28214 Corchorus olitorius HOM05D004979 ORTHO05D006190 1.3e-115 421.0 286 70.6
Sopen04g025050 Solanum pennellii HOM05D004979 ORTHO05D006190 1.4e-112 411.0 230 80.0
Ca_17455_v3 Cicer arietinum L. HOM05D004979 ORTHO05D006190 5.8e-111 405.6 229 80.8
Dinv22420 Davidia involucrata HOM05D004979 ORTHO05D006190 3.1e-96 356.7 526 42.4
GSVIVG01007430001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.0e-86 325.1 207 72.9
GSVIVG01007210001 Vitis vinifera HOM05D004979 ORTHO05D006190 1.3e-86 324.7 208 71.6
Cpa.g.sc46.4 Carica papaya HOM05D004979 ORTHO05D006190 6.3e-81 305.8 165 84.2
Cfa022844 Carpinus fangiana HOM05D004979 ORTHO05D006190 1.3e-78 298.1 560 33.4
Actinidia01657 Actinidia chinensis HOM05D004979 ORTHO05D006190 1.3e-75 288.1 365 50.1
Cre14.g617150 Chlamydomonas reinhardtii HOM05D004979 ORTHO05D006190 5.1e-75 286.2 538 34.8
Cpa.g.sc46.2 Carica papaya HOM05D004979 ORTHO05D006190 5.7e-74 282.7 240 59.2
MCO11G558 Micromonas commoda HOM05D004979 ORTHO05D006190 4.1e-72 276.6 490 36.5
PRCOL_00000039 Prasinoderma coloniale HOM05D004979 ORTHO05D006190 2.6e-71 273.9 514 35.2
CAN.G1164.35 Capsicum annuum HOM05D004979 ORTHO05D006190 1.9e-69 267.7 169 74.6
HanXRQChr14g0439781 Helianthus annuus HOM05D004979 ORTHO05D006190 6.1e-60 236.1 190 60.0
SHI20228 Sapria himalayana HOM05D004979 ORTHO05D006190 4.2e-53 213.4 262 46.2
DCAR_032148 Daucus carota HOM05D004979 ORTHO05D006190 9.1e-48 195.7 336 38.1
ClCG03G002030 Citrullus lanatus HOM05D004979 ORTHO05D006190 8.8e-43 179.1 161 58.4
Lsat_1_v5_gn_8_74721 Lactuca sativa HOM05D004979 ORTHO05D006190 3.6e-36 157.1 85 77.6
Actinidia27722 Actinidia chinensis HOM05D004979 ORTHO05D006190 9.8e-34 149.1 194 46.9
CDE04G1277 Ceratophyllum demersum HOM05D004979 ORTHO05D006190 5.4e-32 143.3 99 66.7
MBI07_g39750_MAGBIO Magnolia biondii HOM05D004979 ORTHO05D006190 1.2e-31 142.1 116 61.2
GSVIVG01004371001 Vitis vinifera HOM05D004979 ORTHO05D006190 3.5e-31 140.6 103 67.0
QL03p011256 Quercus lobata HOM05D004979 ORTHO05D006190 4.5e-31 140.2 79 84.8
Lsat_1_v5_gn_8_74741 Lactuca sativa HOM05D004979 ORTHO05D006190 1.3e-30 138.7 106 66.0
Rhsim05G0125000 Rhododendron simsii HOM05D004979 ORTHO05D006190 5.7e-26 123.2 270 35.2
SHI32754 Sapria himalayana HOM05D001374 ORTHO05D004296 1.4e-24 118.6 119 50.4
FAN19G1386 Fragaria x ananassa HOM05D004979 ORTHO05D006190 1.6e-23 115.2 94 59.6
Aqoxy2G02599 Aquilegia oxysepala HOM05D004979 ORTHO05D006190 5.0e-14 83.6 41 80.5
SHI20227 Sapria himalayana HOM05D004979 ORTHO05D006190 9.5e-13 79.3 51 68.6
AagrBONN_evm.TU.Sc2ySwM_117.715 Anthoceros agrestis HOM05D004979 ORTHO05D006190 6.2e-12 76.6 102 40.2
Sc05g0003730 Simmondsia chinensis HOM05D004979 ORTHO05D006190 4.4e-10 70.5 80 48.8
Medtr3g085120 Medicago truncatula HOM05D002545 ORTHO05D002335 5.8e-10 70.1 114 33.3
CBR_g72775 Chara braunii HOM05D004979 ORTHO05D132771 7.1e-08 63.2 141 32.6


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