Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020892 Camellia sinensis var. sinensis HOM05D005959 ORTHO05D007263 7.4e-139 497.3 267 100.0
MSTRG.26742 Avicennia marina HOM05D005959 ORTHO05D007263 6.1e-117 424.5 265 83.8
Gohir.D04G117100 Gossypium hirsutum HOM05D005959 ORTHO05D007263 1.8e-116 422.9 267 82.8
Gorai.009G422000 Gossypium raimondii HOM05D005959 ORTHO05D007263 5.2e-116 421.4 267 82.4
Duzib106G1538 Durio zibethinus HOM05D005959 ORTHO05D007263 8.9e-116 420.6 265 82.6
Thecc.05G049500 Theobroma cacao HOM05D005959 ORTHO05D007263 8.9e-116 420.6 265 82.6
unitig_578.g16043 Utricularia gibba HOM05D005959 ORTHO05D007263 5.7e-115 417.9 265 81.1
Hma1.2p1_0111F.1_g053440 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 7.5e-115 417.5 265 82.3
Rhsim05G0184400 Rhododendron simsii HOM05D005959 ORTHO05D007263 1.7e-114 416.4 265 82.6
Duzib128G1635 Durio zibethinus HOM05D005959 ORTHO05D007263 6.3e-114 414.5 267 80.5
Manes.08G000700 Manihot esculenta HOM05D005959 ORTHO05D007263 6.3e-114 414.5 265 81.1
Potri.016G082100 Populus trichocarpa HOM05D005959 ORTHO05D007263 6.3e-114 414.5 264 82.2
Cc06_g03270 Coffea canephora HOM05D005959 ORTHO05D007263 1.1e-113 413.7 265 81.1
Migut.L01643 Erythranthe guttata HOM05D005959 ORTHO05D007263 2.4e-113 412.5 265 80.8
FAN14G3394 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.4e-113 412.5 266 78.9
Duzib093G0581 Durio zibethinus HOM05D005959 ORTHO05D007263 4.1e-113 411.8 265 80.8
FAN02G2849 Fragaria x ananassa HOM05D005959 ORTHO05D007263 5.4e-113 411.4 266 79.3
FAN09G4388 Fragaria x ananassa HOM05D005959 ORTHO05D007263 5.4e-113 411.4 265 80.0
Peaxi162Scf00009g00079 Petunia axillaris HOM05D005959 ORTHO05D007263 7.0e-113 411.0 265 81.1
Oeu026074.1 Olea europaea HOM05D005959 ORTHO05D007263 1.2e-112 410.2 265 80.4
Glyma.10G047100 Glycine max HOM05D005959 ORTHO05D007263 2.0e-112 409.5 261 82.0
RcHm_v2.0_Chr3g0468051 Rosa chinensis HOM05D005959 ORTHO05D007263 2.0e-112 409.5 266 79.3
FAN05G1034 Fragaria x ananassa HOM05D005959 ORTHO05D007263 2.7e-112 409.1 265 79.2
SGA_v2.0_scaffold94G28648 Striga asiatica HOM05D005959 ORTHO05D007263 3.5e-112 408.7 265 81.5
TWI74G1319 Tripterygium wilfordii HOM05D005959 ORTHO05D007263 7.8e-112 407.5 265 82.6
Nitab4.5_0000725g0200 Nicotiana tabacum HOM05D005959 ORTHO05D007263 1.3e-111 406.8 265 80.0
Solyc10g085950.2 Solanum lycopersicum HOM05D005959 ORTHO05D007263 2.3e-111 406.0 265 80.0
Thhalv10017068m.g Eutrema salsugineum HOM05D005959 ORTHO05D007263 2.9e-111 405.6 272 78.3
Lj3A975G71 Lonicera japonica HOM05D005959 ORTHO05D007263 2.9e-111 405.6 265 80.8
PGR004G1166 Punica granatum HOM05D005959 ORTHO05D007263 2.9e-111 405.6 263 82.1
PGSC0003DMG400017610 Solanum tuberosum HOM05D005959 ORTHO05D007263 2.9e-111 405.6 265 80.4
Ciclev10012473m.g Citrus clementina HOM05D005959 ORTHO05D007263 3.9e-111 405.2 265 80.0
QL07p045958 Quercus lobata HOM05D005959 ORTHO05D007263 5.0e-111 404.8 264 79.5
MD12G1131100 Malus domestica HOM05D005959 ORTHO05D007263 6.6e-111 404.4 265 79.2
Prupe.6G245600 Prunus persica HOM05D005959 ORTHO05D007263 6.6e-111 404.4 265 80.4
Atru.chr8.2507 Acer truncatum HOM05D005959 ORTHO05D007263 8.6e-111 404.1 265 79.6
DCAR_020866 Daucus carota HOM05D005959 ORTHO05D007263 1.1e-110 403.7 265 79.6
Cfa017467 Carpinus fangiana HOM05D005959 ORTHO05D007263 1.5e-110 403.3 265 80.4
Potri.006G215700 Populus trichocarpa HOM05D005959 ORTHO05D007263 1.5e-110 403.3 264 79.5
FvH4_6g14820 Fragaria vesca HOM05D005959 ORTHO05D007263 2.5e-110 402.5 255 82.0
Carub.0004s1924 Capsella rubella HOM05D005959 ORTHO05D007263 3.3e-110 402.1 264 79.2
MD04G1110300 Malus domestica HOM05D005959 ORTHO05D007263 3.3e-110 402.1 265 80.0
Hund12071 Selenicereus undatus HOM05D005959 ORTHO05D007263 5.6e-110 401.4 267 77.5
CARHR132260 Cardamine hirsuta HOM05D005959 ORTHO05D007263 7.3e-110 401.0 264 79.2
Sp4g19650 Schrenkiella parvula HOM05D005959 ORTHO05D007263 9.5e-110 400.6 272 76.8
A04p28510 Brassica napus HOM05D005959 ORTHO05D007263 1.2e-109 400.2 273 76.6
BraA04t18329Z Brassica rapa HOM05D005959 ORTHO05D007263 1.2e-109 400.2 273 76.6
C04p65830 Brassica napus HOM05D005959 ORTHO05D007263 1.6e-109 399.8 273 76.6
Aa31LG5G22650 Aethionema arabicum HOM05D005959 ORTHO05D007263 2.1e-109 399.4 267 77.5
AT2G37330 Arabidopsis thaliana HOM05D005959 ORTHO05D007263 3.6e-109 398.7 264 78.4
TAR623G1105 Trochodendron aralioides HOM05D005959 ORTHO05D007263 3.6e-109 398.7 267 79.4
AL4G33710 Arabidopsis lyrata HOM05D005959 ORTHO05D007263 4.7e-109 398.3 264 78.0
Eucgr.K03183 Eucalyptus grandis HOM05D005959 ORTHO05D007263 8.0e-109 397.5 274 78.1
BcaC02g07517 Brassica carinata HOM05D005959 ORTHO05D007263 1.0e-108 397.1 273 76.2
BolC4t28086H Brassica oleracea HOM05D005959 ORTHO05D007263 1.0e-108 397.1 273 76.2
ATR0594G178 Amborella trichopoda HOM05D005959 ORTHO05D007263 1.4e-108 396.7 265 80.0
arahy.Tifrunner.gnm1.ann1.R87Y2D Arachis hypogaea HOM05D005959 ORTHO05D007263 1.8e-108 396.4 262 79.0
Sc01g0003780 Simmondsia chinensis HOM05D005959 ORTHO05D007263 2.3e-108 396.0 263 78.7
EL10Ac7g17275 Beta vulgaris HOM05D005959 ORTHO05D007263 3.1e-108 395.6 265 78.5
BcaC02g11852 Brassica carinata HOM05D005959 ORTHO05D007263 4.0e-108 395.2 262 78.6
Haze_20691 Corylus avellana HOM05D005959 ORTHO05D007263 5.2e-108 394.8 278 76.3
Ah.15g091970 Amaranthus hybridus HOM05D005959 ORTHO05D007263 6.8e-108 394.4 265 78.5
A05p08590 Brassica napus HOM05D005959 ORTHO05D007263 8.9e-108 394.0 262 78.6
Lj1g0020453 Lotus japonicus HOM05D005959 ORTHO05D007263 8.9e-108 394.0 262 78.2
BraA05t19827Z Brassica rapa HOM05D005959 ORTHO05D007263 1.2e-107 393.7 262 78.2
Sopen10g035320 Solanum pennellii HOM05D005959 ORTHO05D007263 1.5e-107 393.3 253 83.0
C04p10680 Brassica napus HOM05D005959 ORTHO05D007263 2.6e-107 392.5 260 78.8
BolC4t22661H Brassica oleracea HOM05D005959 ORTHO05D007263 2.6e-107 392.5 260 78.8
CANSAT80G1914 Cannabis sativa HOM05D005959 ORTHO05D007263 5.8e-107 391.3 263 76.4
Glyma.03G175800 Glycine max HOM05D005959 ORTHO05D007263 9.8e-107 390.6 262 77.5
Lsat_1_v5_gn_6_33160 Lactuca sativa HOM05D005959 ORTHO05D007263 9.8e-107 390.6 265 75.5
Sabra16G0089800 Salix brachista HOM05D005959 ORTHO05D007263 9.8e-107 390.6 264 79.5
Phvul.001G172900 Phaseolus vulgaris HOM05D005959 ORTHO05D007263 1.7e-106 389.8 262 76.7
Aqoxy2G00899 Aquilegia oxysepala HOM05D005959 ORTHO05D007263 2.9e-106 389.0 260 78.1
arahy.Tifrunner.gnm1.ann1.T45XFJ Arachis hypogaea HOM05D005959 ORTHO05D007263 2.9e-106 389.0 262 78.2
Ca_08807_v3 Cicer arietinum L. HOM05D005959 ORTHO05D007263 2.9e-106 389.0 265 77.0
CDE07G0433 Ceratophyllum demersum HOM05D005959 ORTHO05D007263 3.7e-106 388.7 259 78.8
vmacro20093 Vaccinium macrocarpon HOM05D005959 ORTHO05D007263 4.9e-106 388.3 289 74.4
TPR.G21452 Trifolium pratense HOM05D005959 ORTHO05D007263 6.4e-106 387.9 263 76.4
Psat0s1952g0120 Pisum sativum HOM05D005959 ORTHO05D007263 1.4e-105 386.7 265 75.8
BcaB02g09288 Brassica carinata HOM05D005959 ORTHO05D007263 1.9e-105 386.3 262 77.5
MELO3C009294.2 Cucumis melo HOM05D005959 ORTHO05D007263 2.4e-105 386.0 263 77.2
CsaV3_3G035240 Cucumis sativus L. HOM05D005959 ORTHO05D007263 4.1e-105 385.2 263 76.4
CAN.G687.19 Capsicum annuum HOM05D005959 ORTHO05D007263 5.4e-105 384.8 241 85.1
Aa31LG5G22670 Aethionema arabicum HOM05D005959 ORTHO05D007263 7.0e-105 384.4 253 79.8
MBI14_g34528_MAGBIO Magnolia biondii HOM05D005959 ORTHO05D007263 9.2e-105 384.0 262 78.2
PSO339G1263 Papaver somniferum HOM05D005959 ORTHO05D007263 1.2e-104 383.6 260 78.1
Lalb_Chr25g0289351 Lupinus albus HOM05D005959 ORTHO05D007263 1.6e-104 383.3 264 75.4
HanXRQChr13g0399331 Helianthus annuus HOM05D005959 ORTHO05D007263 2.0e-104 382.9 265 75.1
Lj2A103T72 Lonicera japonica HOM05D005959 ORTHO05D007263 2.7e-104 382.5 260 76.9
Gohir.A04G077900 Gossypium hirsutum HOM05D005959 ORTHO05D007263 4.6e-104 381.7 288 72.6
Medtr7g100160 Medicago truncatula HOM05D005959 ORTHO05D007263 7.8e-104 380.9 263 75.7
PSO384G3658 Papaver somniferum HOM05D005959 ORTHO05D007263 3.0e-103 379.0 260 76.9
Sed0012545 Sechium edule HOM05D005959 ORTHO05D007263 5.0e-103 378.3 263 75.3
THA.LOC104823437 Tarenaya hassleriana HOM05D005959 ORTHO05D007263 6.6e-103 377.9 264 75.0
HPP92_021201 Vanilla planifolia HOM05D005959 ORTHO05D007263 6.6e-103 377.9 257 77.0
ECA233G2168 Erigeron canadensis HOM05D005959 ORTHO05D007263 1.5e-102 376.7 253 78.7
SEGI_41460 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 1.9e-102 376.3 256 77.0
BcaB06g28984 Brassica carinata HOM05D005959 ORTHO05D007263 5.6e-102 374.8 251 78.9
CiPaw.09G185300 Carya illinoinensis HOM05D005959 ORTHO05D007263 2.8e-101 372.5 225 86.2
Aa31LG5G22660 Aethionema arabicum HOM05D005959 ORTHO05D007263 4.7e-101 371.7 264 72.0
Lalb_Chr20g0113031 Lupinus albus HOM05D005959 ORTHO05D007263 8.1e-101 370.9 262 72.5
Hma1.2p1_0111F.1_g053390 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 4.0e-100 368.6 264 71.2
GSVIVG01025576001 Vitis vinifera HOM05D005959 ORTHO05D007263 2.0e-99 366.3 225 86.2
Os05g0119000 Oryza sativa ssp. japonica HOM05D005959 ORTHO05D007263 2.2e-98 362.8 261 74.7
Mapoly0099s0026 Marchantia polymorpha HOM05D005959 ORTHO05D007263 1.0e-95 354.0 254 72.0
Cpa.g.sc114.24 Carica papaya HOM05D005959 ORTHO05D007263 1.5e-94 350.1 238 78.2
Pp3c20_6820 Physcomitrium patens HOM05D005959 ORTHO05D007263 3.3e-94 349.0 264 69.3
Eucgr.A01210 Eucalyptus grandis HOM05D005959 ORTHO05D007263 5.6e-94 348.2 259 72.2
Hma1.2p1_0111F.1_g053380 Hydrangea macrophylla HOM05D005959 ORTHO05D007263 5.6e-94 348.2 262 68.3
AUR62041007 Chenopodium quinoa HOM05D005959 ORTHO05D007263 3.1e-92 342.4 265 70.9
AagrBONN_evm.TU.Sc2ySwM_344.2577 Anthoceros agrestis HOM05D005959 ORTHO05D007263 8.9e-92 340.9 257 68.5
COL.COLO4_10311 Corchorus olitorius HOM05D005959 ORTHO05D007263 1.5e-86 323.6 265 67.9
SMO271G0174 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 3.3e-86 322.4 260 66.2
SEGI_29713 Sequoiadendron giganteum HOM05D005959 ORTHO05D007263 8.1e-85 317.8 252 68.7
Dinv35677 Davidia involucrata HOM05D005959 ORTHO05D007263 1.3e-82 310.5 187 86.6
Actinidia05285 Actinidia chinensis HOM05D005959 ORTHO05D007263 1.4e-65 253.8 177 74.0
CBR_g49882 Chara braunii HOM05D000019 ORTHO05D000048 2.4e-65 253.1 255 53.7
Nitab4.5_0002073g0040 Nicotiana tabacum HOM05D005959 ORTHO05D007263 1.1e-60 237.7 265 53.2
ClCG10G020740 Citrullus lanatus HOM05D005959 ORTHO05D007263 1.8e-60 236.9 152 81.6
Actinidia11237 Actinidia chinensis HOM05D005959 ORTHO05D007263 2.2e-58 229.9 154 81.2
Nn2g12822 Nelumbo nucifera HOM05D005959 ORTHO05D007263 1.1e-57 227.6 163 74.2
SMO364G0860 Selaginella moellendorffii HOM05D005959 ORTHO05D007263 1.5e-51 207.2 237 46.0
Actinidia19734 Actinidia chinensis HOM05D005959 ORTHO05D007263 7.2e-49 198.4 269 48.3
CBR_g3295 Chara braunii HOM05D005959 ORTHO05D007263 1.4e-44 184.1 241 41.9
AagrBONN_evm.TU.Sc2ySwM_344.2052 Anthoceros agrestis HOM05D005959 ORTHO05D007263 3.9e-39 166.0 232 40.9
Actinidia13264 Actinidia chinensis HOM05D005959 ORTHO05D007263 2.9e-34 149.8 96 82.3
CDE04G1398 Ceratophyllum demersum HOM05D004061 ORTHO05D004693 4.2e-33 146.0 95 77.9
Nn5g28122 Nelumbo nucifera HOM05D005959 ORTHO05D007263 6.7e-31 138.7 77 92.2
AagrBONN_evm.TU.Sc2ySwM_344.389 Anthoceros agrestis HOM05D005959 ORTHO05D007263 4.4e-30 136.0 234 35.0
Nn1g07598 Nelumbo nucifera HOM05D005959 ORTHO05D007263 3.1e-28 129.8 75 88.0
MD08G1090300 Malus domestica HOM05D005959 ORTHO05D007263 2.6e-27 126.7 119 59.7
TAR629G2669 Trochodendron aralioides HOM05D002023 ORTHO05D002049 8.8e-23 111.7 100 62.0
Cre16.g673000 Chlamydomonas reinhardtii HOM05D005959 ORTHO05D007263 1.5e-22 110.9 235 32.8
Oeu004323.1 Olea europaea HOM05D005959 ORTHO05D007263 1.0e-10 71.6 75 57.3


User provided reference genes

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