Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020863 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 1.0e-171 606.7 319 100.0
CSS0004933 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 3.6e-156 555.1 297 98.7
Actinidia18535 Actinidia chinensis HOM05D004655 ORTHO05D005567 1.3e-129 466.8 315 79.4
CSS0017466 Camellia sinensis var. sinensis HOM05D004655 ORTHO05D005567 3.7e-129 465.3 295 84.1
Actinidia12466 Actinidia chinensis HOM05D004655 ORTHO05D005567 6.4e-129 464.5 293 82.9
Dinv13829 Davidia involucrata HOM05D004655 ORTHO05D005567 4.9e-121 438.3 291 80.1
TAR627G0814 Trochodendron aralioides HOM05D004655 ORTHO05D005567 5.4e-120 434.9 290 80.0
Manes.13G152400 Manihot esculenta HOM05D004655 ORTHO05D005567 2.1e-119 433.0 297 78.8
TAR629G1482 Trochodendron aralioides HOM05D004655 ORTHO05D005567 2.7e-119 432.6 292 77.1
QL08p036998 Quercus lobata HOM05D004655 ORTHO05D005567 3.5e-119 432.2 295 78.0
vmacro12257 Vaccinium macrocarpon HOM05D004655 ORTHO05D005567 6.2e-116 421.4 294 78.9
Atru.chr6.3084 Acer truncatum HOM05D004655 ORTHO05D005567 2.4e-115 419.5 295 75.6
Gorai.012G132100 Gossypium raimondii HOM05D004655 ORTHO05D005567 3.1e-115 419.1 295 75.6
Duzib132G0437 Durio zibethinus HOM05D004655 ORTHO05D005567 6.9e-115 417.9 295 75.6
Duzib132G0466 Durio zibethinus HOM05D004655 ORTHO05D005567 6.9e-115 417.9 295 75.6
Gohir.A04G106100 Gossypium hirsutum HOM05D004655 ORTHO05D005567 9.0e-115 417.5 295 75.3
Gohir.D04G146200 Gossypium hirsutum HOM05D004655 ORTHO05D005567 9.0e-115 417.5 295 75.3
Hma1.2p1_0662F.1_g198360 Hydrangea macrophylla HOM05D004655 ORTHO05D005567 1.2e-114 417.2 293 77.8
Lj3g0013026 Lotus japonicus HOM05D004655 ORTHO05D005567 1.2e-114 417.2 291 77.3
RcHm_v2.0_Chr2g0161411 Rosa chinensis HOM05D004655 ORTHO05D005567 1.5e-114 416.8 297 75.4
Medtr4g045980 Medicago truncatula HOM05D004655 ORTHO05D005567 7.6e-114 414.5 297 74.7
arahy.Tifrunner.gnm1.ann1.81TW8H Arachis hypogaea HOM05D004655 ORTHO05D005567 3.8e-113 412.1 296 73.3
arahy.Tifrunner.gnm1.ann1.S2JPPU Arachis hypogaea HOM05D004655 ORTHO05D005567 3.8e-113 412.1 296 73.6
Ciclev10016098m.g Citrus clementina HOM05D004655 ORTHO05D005567 4.9e-113 411.8 297 73.4
Thecc.02G170400 Theobroma cacao HOM05D004655 ORTHO05D005567 4.9e-113 411.8 295 75.3
Glyma.12G200200 Glycine max HOM05D004655 ORTHO05D005567 6.4e-113 411.4 291 75.9
Psat7g149680 Pisum sativum HOM05D004655 ORTHO05D005567 6.4e-113 411.4 288 76.4
VMungo1080G0396 Vigna mungo HOM05D004655 ORTHO05D005567 6.4e-113 411.4 293 75.1
FvH4_6g44420 Fragaria vesca HOM05D004655 ORTHO05D005567 8.4e-113 411.0 297 73.7
Glyma.06G299100 Glycine max HOM05D004655 ORTHO05D005567 8.4e-113 411.0 287 75.6
COL.COLO4_13659 Corchorus olitorius HOM05D004655 ORTHO05D005567 1.1e-112 410.6 297 74.4
FAN14G2207 Fragaria x ananassa HOM05D004655 ORTHO05D005567 1.1e-112 410.6 297 73.7
MBI18_g27693_MAGBIO Magnolia biondii HOM05D004655 ORTHO05D005567 1.1e-112 410.6 298 74.5
VMungo1127G2245 Vigna mungo HOM05D004655 ORTHO05D005567 3.2e-112 409.1 288 75.7
Phvul.005G108600 Phaseolus vulgaris HOM05D004655 ORTHO05D005567 4.2e-112 408.7 293 75.8
Cfa014528 Carpinus fangiana HOM05D004655 ORTHO05D005567 7.1e-112 407.9 296 74.7
Glyma.13G302100 Glycine max HOM05D004655 ORTHO05D005567 7.1e-112 407.9 291 75.3
EL10Ac9g20731 Beta vulgaris HOM05D004655 ORTHO05D005567 9.3e-112 407.5 289 75.4
Lj3g0017119 Lotus japonicus HOM05D004655 ORTHO05D005567 1.2e-111 407.1 298 72.8
ClCG00G002920 Citrullus lanatus HOM05D004655 ORTHO05D005567 3.5e-111 405.6 292 74.3
ClCG02G001360 Citrullus lanatus HOM05D004655 ORTHO05D005567 3.5e-111 405.6 292 74.3
Rhsim06G0153100 Rhododendron simsii HOM05D004655 ORTHO05D005567 3.5e-111 405.6 319 72.1
MELO3C018772.2 Cucumis melo HOM05D004655 ORTHO05D005567 7.9e-111 404.4 292 73.6
Eucgr.A01774 Eucalyptus grandis HOM05D004655 ORTHO05D005567 7.9e-111 404.4 305 71.5
FAN02G3511 Fragaria x ananassa HOM05D004655 ORTHO05D005567 7.9e-111 404.4 298 73.5
FAN05G4368 Fragaria x ananassa HOM05D004655 ORTHO05D005567 7.9e-111 404.4 298 73.5
Glyma.12G106600 Glycine max HOM05D004655 ORTHO05D005567 7.9e-111 404.4 287 75.3
Phvul.011G110700 Phaseolus vulgaris HOM05D004655 ORTHO05D005567 7.9e-111 404.4 288 75.0
PGR042G1100 Punica granatum HOM05D004655 ORTHO05D005567 1.0e-110 404.1 297 72.1
CiPaw.04G122300 Carya illinoinensis HOM05D004655 ORTHO05D005567 1.7e-110 403.3 296 72.0
FAN02G1121 Fragaria x ananassa HOM05D004655 ORTHO05D005567 1.7e-110 403.3 298 72.8
CiPaw.03G168300 Carya illinoinensis HOM05D004655 ORTHO05D005567 3.0e-110 402.5 292 72.9
TWI36G0222 Tripterygium wilfordii HOM05D004655 ORTHO05D005567 3.9e-110 402.1 293 73.4
CANSAT64G1156 Cannabis sativa HOM05D004655 ORTHO05D005567 5.1e-110 401.7 297 72.1
Hma1.2p1_0565F.1_g179650 Hydrangea macrophylla HOM05D004655 ORTHO05D005567 5.1e-110 401.7 296 76.4
Lalb_Chr01g0005451 Lupinus albus HOM05D004655 ORTHO05D005567 6.6e-110 401.4 296 73.3
Nn1g03859 Nelumbo nucifera HOM05D004655 ORTHO05D005567 8.7e-110 401.0 296 73.0
TWI75G0473 Tripterygium wilfordii HOM05D004655 ORTHO05D005567 8.7e-110 401.0 297 73.1
Potri.019G117900 Populus trichocarpa HOM05D004655 ORTHO05D005567 2.5e-109 399.4 296 73.3
CsaV3_7G004070 Cucumis sativus L. HOM05D004655 ORTHO05D005567 4.3e-109 398.7 292 72.9
TPR.G21652 Trifolium pratense HOM05D004655 ORTHO05D005567 4.3e-109 398.7 264 77.7
Prupe.3G228700 Prunus persica HOM05D004655 ORTHO05D005567 1.3e-108 397.1 286 74.5
Lalb_Chr22g0356311 Lupinus albus HOM05D004655 ORTHO05D005567 1.6e-108 396.7 285 74.0
Potri.013G148400 Populus trichocarpa HOM05D004655 ORTHO05D005567 1.6e-108 396.7 296 74.3
arahy.Tifrunner.gnm1.ann1.YR7HYJ Arachis hypogaea HOM05D004655 ORTHO05D005567 3.6e-108 395.6 293 73.4
MD09G1097200 Malus domestica HOM05D004655 ORTHO05D005567 3.6e-108 395.6 291 72.2
MD17G1085500 Malus domestica HOM05D004655 ORTHO05D005567 8.1e-108 394.4 294 71.1
Haze_13070 Corylus avellana HOM05D004655 ORTHO05D005567 2.4e-107 392.9 355 63.4
arahy.Tifrunner.gnm1.ann1.XZ54ZU Arachis hypogaea HOM05D004655 ORTHO05D005567 4.0e-107 392.1 293 72.7
Ah.01g005210 Amaranthus hybridus HOM05D004655 ORTHO05D005567 6.9e-107 391.3 293 73.0
AUR62037119 Chenopodium quinoa HOM05D004655 ORTHO05D005567 9.0e-107 391.0 292 72.3
Sed0025834 Sechium edule HOM05D004655 ORTHO05D005567 9.0e-107 391.0 291 71.1
Lj1C737G5 Lonicera japonica HOM05D004655 ORTHO05D005567 1.2e-106 390.6 334 66.8
Lsat_1_v5_gn_3_40720 Lactuca sativa HOM05D004655 ORTHO05D005567 1.5e-106 390.2 310 70.0
AUR62032763 Chenopodium quinoa HOM05D004655 ORTHO05D005567 2.0e-106 389.8 289 73.4
TPR.G18073 Trifolium pratense HOM05D004655 ORTHO05D005567 3.4e-106 389.0 293 72.0
GSVIVG01029990001 Vitis vinifera HOM05D004655 ORTHO05D005567 7.6e-106 387.9 238 81.5
ATR0693G119 Amborella trichopoda HOM05D004655 ORTHO05D005567 1.3e-105 387.1 296 68.6
Nn1g06795 Nelumbo nucifera HOM05D004655 ORTHO05D005567 1.3e-105 387.1 272 77.2
Nn1g06798 Nelumbo nucifera HOM05D004655 ORTHO05D005567 1.3e-105 387.1 272 77.2
Psat5g269080 Pisum sativum HOM05D004655 ORTHO05D005567 1.3e-105 387.1 266 74.4
PGSC0003DMG400018330 Solanum tuberosum HOM05D004655 ORTHO05D005567 1.7e-105 386.7 296 70.6
Sopen07g028730 Solanum pennellii HOM05D004655 ORTHO05D005567 3.8e-105 385.6 296 69.9
Migut.H01014 Erythranthe guttata HOM05D004655 ORTHO05D005567 6.4e-105 384.8 293 70.6
Ca_01544_v3 Cicer arietinum L. HOM05D004655 ORTHO05D005567 1.4e-104 383.6 289 69.9
DCAR_012973 Daucus carota HOM05D004655 ORTHO05D005567 1.4e-104 383.6 299 70.9
Ca_20707_v3 Cicer arietinum L. HOM05D004655 ORTHO05D005567 7.1e-104 381.3 284 72.9
Medtr2g089795 Medicago truncatula HOM05D004655 ORTHO05D005567 9.3e-104 380.9 287 71.4
MSTRG.14176 Avicennia marina HOM05D004655 ORTHO05D005567 1.2e-103 380.6 294 70.4
HanXRQChr06g0171121 Helianthus annuus HOM05D004655 ORTHO05D005567 2.1e-103 379.8 292 70.9
Cc05_g06070 Coffea canephora HOM05D004655 ORTHO05D005567 5.1e-102 375.2 301 68.8
THA.LOC104804073 Tarenaya hassleriana HOM05D004655 ORTHO05D005567 1.9e-101 373.2 294 68.0
Sc12g0002690 Simmondsia chinensis HOM05D004655 ORTHO05D005567 2.5e-101 372.9 287 71.4
Sabra19G0118300 Salix brachista HOM05D004655 ORTHO05D005567 1.3e-100 370.5 344 61.9
Sabra19G0135300 Salix brachista HOM05D004655 ORTHO05D005567 1.3e-100 370.5 345 61.7
Sp3g34160 Schrenkiella parvula HOM05D004655 ORTHO05D005567 2.1e-100 369.8 297 68.0
CARHR111640 Cardamine hirsuta HOM05D004655 ORTHO05D005567 3.7e-100 369.0 293 67.6
Carub.0003s3556 Capsella rubella HOM05D004655 ORTHO05D005567 1.4e-99 367.1 295 68.8
AT2G20890 Arabidopsis thaliana HOM05D004655 ORTHO05D005567 4.0e-99 365.5 294 67.7
AL3G54160 Arabidopsis lyrata HOM05D004655 ORTHO05D005567 5.3e-99 365.2 294 67.0
PSO675G0243 Papaver somniferum HOM05D004655 ORTHO05D005567 6.9e-99 364.8 299 66.6
ECA246G4617 Erigeron canadensis HOM05D004655 ORTHO05D005567 1.5e-98 363.6 247 76.9
A09p58650 Brassica napus HOM05D004655 ORTHO05D005567 3.4e-98 362.5 291 67.4
BraA09t41251Z Brassica rapa HOM05D004655 ORTHO05D005567 3.4e-98 362.5 291 67.4
HPP92_012362 Vanilla planifolia HOM05D004655 ORTHO05D005567 7.6e-98 361.3 297 67.0
Aa31LG8G17800 Aethionema arabicum HOM05D004655 ORTHO05D005567 1.3e-97 360.5 298 66.8
BcaB08g34948 Brassica carinata HOM05D004655 ORTHO05D005567 2.2e-97 359.8 292 66.4
BcaC07g41186 Brassica carinata HOM05D004655 ORTHO05D005567 4.9e-97 358.6 291 67.0
C08p41940 Brassica napus HOM05D004655 ORTHO05D005567 4.9e-97 358.6 291 67.0
BolC8t51757H Brassica oleracea HOM05D004655 ORTHO05D005567 4.9e-97 358.6 291 67.0
Thhalv10002049m.g Eutrema salsugineum HOM05D004655 ORTHO05D005567 8.4e-97 357.8 297 66.7
PSO541G1277 Papaver somniferum HOM05D004655 ORTHO05D005567 8.4e-97 357.8 294 66.3
DCAR_019200 Daucus carota HOM05D004655 ORTHO05D005567 1.1e-96 357.5 232 78.9
Duzib052G1220 Durio zibethinus HOM05D004655 ORTHO05D005567 4.2e-96 355.5 294 66.7
Aqoxy1G03905 Aquilegia oxysepala HOM05D004655 ORTHO05D005567 7.1e-96 354.8 293 65.9
SGA_v2.0_scaffold34G13911 Striga asiatica HOM05D004655 ORTHO05D005567 2.7e-95 352.8 352 58.0
Os07g0558500 Oryza sativa ssp. japonica HOM05D004655 ORTHO05D005567 6.0e-95 351.7 234 75.6
Zm00001eb324100 Zea mays HOM05D004655 ORTHO05D005567 6.0e-95 351.7 238 74.4
SGA_v2.0_scaffold70G23458 Striga asiatica HOM05D004655 ORTHO05D005567 3.0e-94 349.4 270 70.7
unitig_21.g20001 Utricularia gibba HOM05D004655 ORTHO05D005567 3.0e-94 349.4 293 64.5
Sabra13G0119700 Salix brachista HOM05D004655 ORTHO05D005567 3.7e-92 342.4 298 65.8
SalBow1G2826 Salvia bowleyana HOM05D004655 ORTHO05D005567 4.1e-91 339.0 222 77.0
Nitab4.5_0000769g0070 Nicotiana tabacum HOM05D004655 ORTHO05D005567 9.0e-91 337.8 294 64.6
Peaxi162Scf00007g02516 Petunia axillaris HOM05D004655 ORTHO05D005567 2.6e-90 336.3 329 60.8
CAN.G508.2 Capsicum annuum HOM05D004655 ORTHO05D005567 4.5e-90 335.5 224 75.4
SalBow7G2858 Salvia bowleyana HOM05D004655 ORTHO05D005567 1.0e-86 324.3 263 65.4
Lj8C118T0 Lonicera japonica HOM05D004655 ORTHO05D005567 1.8e-86 323.6 232 74.6
Duzib248G0290 Durio zibethinus HOM05D004655 ORTHO05D005567 5.1e-86 322.0 231 72.3
FAN09G1462 Fragaria x ananassa HOM05D004655 ORTHO05D005567 1.6e-84 317.0 298 62.4
Ah.01g014420 Amaranthus hybridus HOM05D004655 ORTHO05D005567 1.2e-82 310.8 230 72.2
Nitab4.5_0001019g0090 Nicotiana tabacum HOM05D004655 ORTHO05D005567 5.0e-81 305.4 219 72.6
Pp3c19_17570 Physcomitrium patens HOM05D004655 ORTHO05D005567 9.4e-80 301.2 227 66.1
Mapoly0010s0156 Marchantia polymorpha HOM05D004655 ORTHO05D005567 3.0e-78 296.2 241 64.3
SMO266G0053 Selaginella moellendorffii HOM05D004655 ORTHO05D005567 5.1e-78 295.4 201 72.1
Pp3c21_14540 Physcomitrium patens HOM05D004655 ORTHO05D005567 2.5e-77 293.1 214 68.2
Sc12g0003940 Simmondsia chinensis HOM05D004655 ORTHO05D005567 2.5e-77 293.1 232 68.1
AagrBONN_evm.TU.Sc2ySwM_344.251 Anthoceros agrestis HOM05D004655 ORTHO05D005567 1.8e-75 287.0 266 57.9
Zm00001eb106830 Zea mays HOM05D004655 ORTHO05D005567 2.4e-75 286.6 184 77.7
Dinv15502 Davidia involucrata HOM05D004655 ORTHO05D005567 5.0e-73 278.9 186 80.1
AUR62032764 Chenopodium quinoa HOM05D001718 ORTHO05D008006 4.2e-72 275.8 266 60.9
AUR62037125 Chenopodium quinoa HOM05D001718 ORTHO05D008006 7.2e-72 275.0 265 61.5
Cpa.g.sc34.80 Carica papaya HOM05D004655 ORTHO05D005567 6.1e-71 271.9 189 75.1
CBR_g78876 Chara braunii HOM05D004655 ORTHO05D005567 1.1e-56 224.6 228 50.4
PRCOL_00003577 Prasinoderma coloniale HOM05D004655 ORTHO05D005567 1.6e-55 220.7 212 51.9
Cre13.g562850 Chlamydomonas reinhardtii HOM05D004655 ORTHO05D005567 1.3e-49 201.1 239 47.3
CDE05G0433 Ceratophyllum demersum HOM05D004655 ORTHO05D005567 1.7e-49 200.7 179 59.8
CDE05G0437 Ceratophyllum demersum HOM05D004655 ORTHO05D005567 2.7e-47 193.4 151 66.2
MCO07G428 Micromonas commoda HOM05D004655 ORTHO05D005567 2.3e-38 163.7 216 42.1
SEGI_32441 Sequoiadendron giganteum HOM05D004655 ORTHO05D005567 1.7e-36 157.5 163 55.8
Sed0002097 Sechium edule HOM05D004655 ORTHO05D005567 3.6e-23 113.2 156 47.4
Cpa.g.sc34.79 Carica papaya HOM05D004655 ORTHO05D005567 6.2e-23 112.5 69 82.6
VMungo0720G1089 Vigna mungo HOM05D004655 ORTHO05D005567 4.4e-21 106.3 59 91.5
ClCG02G001370 Citrullus lanatus HOM05D004655 ORTHO05D005567 1.1e-19 101.7 64 82.8
Sabra19G0118700 Salix brachista HOM05D004655 ORTHO05D005567 8.9e-14 82.0 118 45.8
Oeu029438.1 Olea europaea HOM05D004655 ORTHO05D005567 1.1e-11 75.1 48 72.9
Hma1.2p1_0479F.1_g161430 Hydrangea macrophylla HOM05D001315 ORTHO05D001618 1.2e-10 71.6 52 71.2


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