Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020858 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 8.6e-85 317.0 166 100.0
CSS0003210 Camellia sinensis var. sinensis HOM05D005991 ORTHO05D007408 8.7e-53 210.7 137 84.7
Actinidia18486 Actinidia chinensis HOM05D005991 ORTHO05D007408 1.0e-45 187.2 126 78.6
Dinv05101 Davidia involucrata HOM05D005991 ORTHO05D007408 8.1e-43 177.6 126 76.2
Rhsim02G0001600 Rhododendron simsii HOM05D005991 ORTHO05D007408 2.2e-40 169.5 126 76.2
Actinidia28298 Actinidia chinensis HOM05D005991 ORTHO05D007408 3.8e-40 168.7 126 73.8
vmacro19301 Vaccinium macrocarpon HOM05D005991 ORTHO05D007408 6.4e-40 167.9 126 75.4
Eucgr.H04085 Eucalyptus grandis HOM05D005991 ORTHO05D007408 7.9e-38 161.0 140 65.0
MBI18_g36460_MAGBIO Magnolia biondii HOM05D005991 ORTHO05D007408 4.3e-36 155.2 127 66.9
Oeu009727.1 Olea europaea HOM05D005991 ORTHO05D007408 5.6e-36 154.8 125 68.8
Lj9A696T49 Lonicera japonica HOM05D005991 ORTHO05D007408 2.8e-35 152.5 140 62.9
TAR362G0621 Trochodendron aralioides HOM05D005991 ORTHO05D007408 3.7e-35 152.1 125 68.0
PGR004G0142 Punica granatum HOM05D005991 ORTHO05D007408 4.8e-35 151.8 126 67.5
TAR633G0953 Trochodendron aralioides HOM05D005991 ORTHO05D007408 4.8e-35 151.8 126 68.3
Lalb_Chr13g0298761 Lupinus albus HOM05D005991 ORTHO05D007408 2.4e-34 149.4 126 70.6
DCAR_019078 Daucus carota HOM05D005991 ORTHO05D007408 3.1e-34 149.1 126 66.7
Nn3g21864 Nelumbo nucifera HOM05D005991 ORTHO05D007408 2.0e-33 146.4 125 64.8
Manes.03G209000 Manihot esculenta HOM05D005991 ORTHO05D007408 7.6e-33 144.4 125 68.8
Cfa015696 Carpinus fangiana HOM05D005991 ORTHO05D007408 1.0e-32 144.1 125 67.2
Haze_00826 Corylus avellana HOM05D005991 ORTHO05D007408 1.0e-32 144.1 125 68.0
GSVIVG01017637001 Vitis vinifera HOM05D005991 ORTHO05D007408 1.0e-32 144.1 127 66.9
Migut.I00898 Erythranthe guttata HOM05D005991 ORTHO05D007408 6.5e-32 141.4 126 63.5
PGSC0003DMG400030844 Solanum tuberosum HOM05D005991 ORTHO05D007408 1.9e-31 139.8 134 59.0
Aqoxy7G00454 Aquilegia oxysepala HOM05D005991 ORTHO05D007408 3.2e-31 139.0 134 59.7
MSTRG.22639 Avicennia marina HOM05D005991 ORTHO05D007408 3.2e-31 139.0 126 62.7
Lsat_1_v5_gn_4_27741 Lactuca sativa HOM05D005991 ORTHO05D007408 3.2e-31 139.0 134 59.7
TWI53G1476 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 3.2e-31 139.0 125 64.8
Glyma.07G232800 Glycine max HOM05D005991 ORTHO05D007408 4.2e-31 138.7 134 61.9
Nitab4.5_0013885g0020 Nicotiana tabacum HOM05D005991 ORTHO05D007408 4.2e-31 138.7 141 56.0
Phvul.003G118700 Phaseolus vulgaris HOM05D005991 ORTHO05D007408 4.2e-31 138.7 126 64.3
Psat0s2692g0080 Pisum sativum HOM05D005991 ORTHO05D007408 5.5e-31 138.3 140 60.0
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 1.2e-30 137.1 126 65.1
Glyma.17G037800 Glycine max HOM05D005991 ORTHO05D007408 1.6e-30 136.7 134 61.9
Nitab4.5_0003374g0080 Nicotiana tabacum HOM05D005991 ORTHO05D007408 2.7e-30 136.0 132 59.8
TWI73G0156 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 3.5e-30 135.6 125 63.2
TWI09G0093 Tripterygium wilfordii HOM05D005991 ORTHO05D007408 7.9e-30 134.4 125 62.4
EL10Ac2g02410 Beta vulgaris HOM05D005991 ORTHO05D007408 1.0e-29 134.0 137 54.7
CiPaw.01G133100 Carya illinoinensis HOM05D005991 ORTHO05D007408 1.3e-29 133.7 136 64.0
RcHm_v2.0_Chr4g0426321 Rosa chinensis HOM05D005991 ORTHO05D007408 2.3e-29 132.9 133 63.9
Sopen04g029760 Solanum pennellii HOM05D005991 ORTHO05D007408 2.3e-29 132.9 134 57.5
HanXRQChr16g0526201 Helianthus annuus HOM05D005991 ORTHO05D007408 3.0e-29 132.5 134 58.2
CAN.G1173.8 Capsicum annuum HOM05D005991 ORTHO05D007408 5.1e-29 131.7 138 56.5
FAN17G2933 Fragaria x ananassa HOM05D005991 ORTHO05D007408 6.7e-29 131.3 133 62.4
Solyc04g074800.3 Solanum lycopersicum HOM05D005991 ORTHO05D007408 6.7e-29 131.3 133 57.1
Os01g0328500 Oryza sativa ssp. japonica HOM05D005991 ORTHO05D007408 1.1e-28 130.6 137 56.2
Potri.010G151300 Populus trichocarpa HOM05D005991 ORTHO05D007408 1.1e-28 130.6 127 61.4
Zm00001eb131050 Zea mays HOM05D005991 ORTHO05D007408 1.1e-28 130.6 146 56.8
Medtr4g123060 Medicago truncatula HOM05D005991 ORTHO05D007408 1.5e-28 130.2 126 61.1
Cpa.g.sc146.66 Carica papaya HOM05D005991 ORTHO05D007408 1.9e-28 129.8 125 63.2
FvH4_4g20890 Fragaria vesca HOM05D005991 ORTHO05D007408 2.5e-28 129.4 133 61.7
FAN12G0391 Fragaria x ananassa HOM05D005991 ORTHO05D007408 2.5e-28 129.4 133 61.7
FAN07G2713 Fragaria x ananassa HOM05D005991 ORTHO05D007408 3.3e-28 129.0 133 61.7
CsaV3_6G000060 Cucumis sativus L. HOM05D005991 ORTHO05D007408 1.3e-27 127.1 126 59.5
Sc23g0006090 Simmondsia chinensis HOM05D005991 ORTHO05D007408 1.3e-27 127.1 133 55.6
Zm00001eb340570 Zea mays HOM05D005991 ORTHO05D007408 1.3e-27 127.1 135 58.5
Sed0009947 Sechium edule HOM05D005991 ORTHO05D007408 3.7e-27 125.6 126 56.3
ECA234G0222 Erigeron canadensis HOM05D005991 ORTHO05D007408 4.8e-27 125.2 134 57.5
MELO3C021248.2 Cucumis melo HOM05D005991 ORTHO05D007408 6.2e-27 124.8 126 58.7
MD13G1147500 Malus domestica HOM05D005991 ORTHO05D007408 6.2e-27 124.8 135 58.5
ClCG06G004330 Citrullus lanatus HOM05D005991 ORTHO05D007408 8.2e-27 124.4 128 59.4
THA.LOC104827106 Tarenaya hassleriana HOM05D005991 ORTHO05D007408 1.1e-26 124.0 125 60.0
arahy.Tifrunner.gnm1.ann1.ELD4MI Arachis hypogaea HOM05D005991 ORTHO05D007408 1.4e-26 123.6 123 62.6
arahy.Tifrunner.gnm1.ann1.5JMV2K Arachis hypogaea HOM05D005991 ORTHO05D007408 1.8e-26 123.2 123 63.4
Lj4g0017646 Lotus japonicus HOM05D005991 ORTHO05D007408 3.1e-26 122.5 135 57.8
unitig_32.g11589 Utricularia gibba HOM05D005991 ORTHO05D007408 4.0e-26 122.1 124 57.3
Atru.chr4.3094 Acer truncatum HOM05D005991 ORTHO05D007408 5.3e-26 121.7 143 54.5
QL06p013384 Quercus lobata HOM05D005991 ORTHO05D007408 5.3e-26 121.7 128 57.8
Cc10_g13510 Coffea canephora HOM05D005991 ORTHO05D007408 9.0e-26 120.9 128 53.9
Thecc.04G307900 Theobroma cacao HOM05D005991 ORTHO05D007408 1.2e-25 120.6 121 59.5
VMungo1215G0582 Vigna mungo HOM05D005991 ORTHO05D007408 1.5e-25 120.2 126 57.9
MD16G1145900 Malus domestica HOM05D005991 ORTHO05D007408 2.6e-25 119.4 143 53.8
Ciclev10005452m.g Citrus clementina HOM05D005991 ORTHO05D007408 4.5e-25 118.6 139 55.4
Prupe.1G111000 Prunus persica HOM05D005991 ORTHO05D007408 1.0e-24 117.5 134 57.5
Peaxi162Scf00139g00312 Petunia axillaris HOM05D005991 ORTHO05D007408 1.3e-24 117.1 132 54.5
TPR.G12610 Trifolium pratense HOM05D005991 ORTHO05D007408 1.7e-24 116.7 126 57.9
Ca_21401_v3 Cicer arietinum L. HOM05D005991 ORTHO05D007408 5.0e-24 115.2 126 56.3
CDE05G0304 Ceratophyllum demersum HOM05D005991 ORTHO05D007408 8.4e-24 114.4 134 53.0
BcaB04g19640 Brassica carinata HOM05D005991 ORTHO05D007408 1.1e-23 114.0 140 52.1
Duzib151G0057 Durio zibethinus HOM05D005991 ORTHO05D007408 1.9e-23 113.2 127 53.5
AT5G30490 Arabidopsis thaliana HOM05D005991 ORTHO05D007408 2.5e-23 112.8 131 52.7
Carub.0020s0004 Capsella rubella HOM05D005991 ORTHO05D007408 2.5e-23 112.8 128 53.1
Sp2g19950 Schrenkiella parvula HOM05D005991 ORTHO05D007408 2.5e-23 112.8 129 52.7
HPP92_017296 Vanilla planifolia HOM05D005991 ORTHO05D007408 2.5e-23 112.8 132 53.8
AL6G41020 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 3.2e-23 112.5 131 51.9
Cc00_g31090 Coffea canephora HOM05D005991 ORTHO05D007408 4.2e-23 112.1 128 51.6
Sp6g09550 Schrenkiella parvula HOM05D005991 ORTHO05D007408 4.2e-23 112.1 130 53.1
Aa31LG11G8380 Aethionema arabicum HOM05D005991 ORTHO05D007408 7.1e-23 111.3 131 51.1
BolC9t53475H Brassica oleracea HOM05D005991 ORTHO05D007408 9.3e-23 110.9 126 53.2
A09p05050 Brassica napus HOM05D005991 ORTHO05D007408 1.2e-22 110.5 127 53.5
BraA09t36144Z Brassica rapa HOM05D005991 ORTHO05D007408 1.2e-22 110.5 127 53.5
CANSAT78G1707 Cannabis sativa HOM05D005991 ORTHO05D007408 1.2e-22 110.5 126 56.3
ATR0693G149 Amborella trichopoda HOM05D005991 ORTHO05D007408 2.1e-22 109.8 128 50.8
CARHR185530 Cardamine hirsuta HOM05D005991 ORTHO05D007408 7.9e-22 107.8 136 49.3
C09p05460 Brassica napus HOM05D005991 ORTHO05D007408 1.8e-21 106.7 127 52.0
BcaNung02118 Brassica carinata HOM05D005991 ORTHO05D007408 2.3e-21 106.3 127 54.3
C07p40040 Brassica napus HOM05D005991 ORTHO05D007408 2.3e-21 106.3 127 54.3
BolC7t44538H Brassica oleracea HOM05D005991 ORTHO05D007408 2.3e-21 106.3 127 54.3
BcaC04g23714 Brassica carinata HOM05D005991 ORTHO05D007408 8.7e-21 104.4 127 52.0
A06p38170 Brassica napus HOM05D005991 ORTHO05D007408 1.5e-20 103.6 104 60.6
BraA06t26732Z Brassica rapa HOM05D005991 ORTHO05D007408 1.5e-20 103.6 104 60.6
Ah.11g042100 Amaranthus hybridus HOM05D005991 ORTHO05D007408 2.5e-20 102.8 137 46.0
COL.COLO4_34551 Corchorus olitorius HOM05D005991 ORTHO05D007408 2.5e-20 102.8 99 65.7
Gorai.005G069300 Gossypium raimondii HOM05D005991 ORTHO05D007408 4.3e-20 102.1 118 53.4
Gohir.A02G056400 Gossypium hirsutum HOM05D005991 ORTHO05D007408 1.6e-19 100.1 118 53.4
arahy.Tifrunner.gnm1.ann1.KWD76U Arachis hypogaea HOM05D005991 ORTHO05D007408 2.2e-19 99.8 123 53.7
Gohir.D02G061600 Gossypium hirsutum HOM05D005991 ORTHO05D007408 3.7e-19 99.0 118 52.5
PSO017G0870 Papaver somniferum HOM05D005991 ORTHO05D007408 3.7e-19 99.0 127 50.4
PSO675G8194 Papaver somniferum HOM05D005991 ORTHO05D007408 4.1e-18 95.5 127 49.6
Thhalv10004825m.g Eutrema salsugineum HOM05D005991 ORTHO05D007408 2.6e-17 92.8 134 46.3
SEGI_07358 Sequoiadendron giganteum HOM05D005991 ORTHO05D007408 2.6e-17 92.8 141 42.6
arahy.Tifrunner.gnm1.ann1.FWR109 Arachis hypogaea HOM05D005991 ORTHO05D007408 5.9e-17 91.7 83 65.1
BcaC06g30693 Brassica carinata HOM05D005991 ORTHO05D007408 1.4e-15 87.0 77 64.9
PGR119G0116 Punica granatum HOM05D005991 ORTHO05D007408 2.5e-15 86.3 64 71.9
AUR62020284 Chenopodium quinoa HOM05D005991 ORTHO05D007408 3.2e-15 85.9 62 67.7
AUR62037721 Chenopodium quinoa HOM05D005991 ORTHO05D007408 7.2e-15 84.7 62 67.7
Mapoly0030s0047 Marchantia polymorpha HOM05D005991 ORTHO05D007408 7.9e-14 81.3 161 36.0
Cre14.g632600 Chlamydomonas reinhardtii HOM05D005991 ORTHO05D007408 3.0e-13 79.3 107 46.7
AL1G65220 Arabidopsis lyrata HOM05D005991 ORTHO05D007408 3.2e-07 59.3 62 53.2
GSVIVG01017610001 Vitis vinifera HOM05D005991 ORTHO05D007408 4.2e-07 58.9 98 44.9
CBR_g56129 Chara braunii HOM05D005991 ORTHO05D007408 1.2e-06 57.4 71 43.7
GSVIVG01017621001 Vitis vinifera HOM05D005991 ORTHO05D007408 1.6e-06 57.0 98 45.9
Actinidia31584 Actinidia chinensis HOM05D005991 ORTHO05D007408 3.6e-06 55.8 88 50.0


User provided reference genes

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