Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.6e-258 894.8 441 100.0
CSS0021702 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 8.2e-151 537.7 428 67.8
CSS0026316 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 2.8e-143 512.7 427 66.3
CSS0047841 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.2e-136 490.7 420 63.3
CSS0001491 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.1e-105 387.9 439 51.5
CSS0023562 Camellia sinensis var. sinensis HOM05D000557 ORTHO05D011057 1.1e-38 165.2 176 52.3
CSS0012554 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.1e-25 122.1 198 35.9
CSS0043342 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.1e-25 122.1 219 34.2
CSS0024781 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 4.4e-19 100.1 255 29.0
CSS0010468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D011057 9.1e-17 92.4 333 27.0
vmacro22723 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 1.3e-15 88.6 247 26.3
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 1.2e-13 82.0 255 25.9
CSS0006937 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.6e-13 81.6 83 42.2
CSS0018658 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.6e-13 81.6 117 41.9
CSS0016458 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.7e-13 80.9 127 40.2
vmacro16299 Vaccinium macrocarpon HOM05D000629 ORTHO05D000576 4.7e-13 80.1 227 28.6
CSS0029903 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 6.1e-13 79.7 114 47.4
vmacro09750 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 8.0e-13 79.3 187 28.9
CSS0020104 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.8e-12 78.2 242 27.3
CSS0021891 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.2e-11 75.5 83 39.8
CSS0049061 Camellia sinensis var. sinensis HOM05D012713 ORTHO05D011057 1.2e-11 75.5 83 39.8
CSS0017101 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.3e-10 72.0 101 42.6
CSS0042344 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.2e-10 71.2 138 39.1
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 3.7e-10 70.5 181 24.9
CSS0025679 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 1.2e-08 65.5 114 35.1
CSS0000959 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.0e-08 64.7 62 53.2
CSS0047350 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 2.7e-08 64.3 47 63.8
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 4.5e-08 63.5 194 26.3
Rhsim05G0024200 Rhododendron simsii HOM05D008219 ORTHO05D009356 5.9e-08 63.2 130 30.0
Phvul.008G101400 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 1.1e-06 58.9 223 25.1
Actinidia23250 Actinidia chinensis HOM05D012898 ORTHO05D009356 1.9e-06 58.2 173 27.2
CSS0044383 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.9e-06 58.2 178 25.8
vmacro05509 Vaccinium macrocarpon HOM05D002996 ORTHO05D003536 1.9e-06 58.2 172 27.3
Rhsim01G0047800 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.5e-06 57.8 149 27.5
Sc09g0002060 Simmondsia chinensis HOM05D009348 ORTHO05D010856 2.5e-06 57.8 452 22.3
Actinidia36659 Actinidia chinensis HOM05D012898 ORTHO05D009356 7.3e-06 56.2 141 31.2
Actinidia07483 Actinidia chinensis HOM05D011882 ORTHO05D011057 9.5e-06 55.8 62 46.8


User provided reference genes

Program Settings