Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020839 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 8.8e-87 323.6 159 100.0
CSS0031901 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 8.6e-42 174.1 135 68.1
CSS0028152 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 9.5e-41 170.6 148 62.8
CSS0017908 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 1.2e-40 170.2 129 69.8
CSS0000863 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 2.0e-38 162.9 131 66.4
CSS0023034 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 2.6e-38 162.5 146 61.6
CSS0028650 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 2.3e-31 139.4 142 57.0
CSS0020709 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 5.4e-28 128.3 156 49.4
CSS0008375 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 2.8e-24 115.9 157 47.1
CSS0030045 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 2.8e-24 115.9 157 47.1
CSS0043805 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.3e-20 100.9 121 46.3
CSS0004988 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-19 100.1 154 43.5
CSS0006020 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.9e-17 93.2 127 42.5
CSS0009355 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.3e-17 92.4 194 38.1
CSS0028520 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 4.8e-16 88.6 82 52.4
CSS0028511 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D000001 6.2e-16 88.2 69 65.2
CSS0009795 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.0e-15 85.5 238 29.0
CSS0010648 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D110099 1.2e-14 84.0 114 47.4
CSS0041521 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D017724 1.5e-14 83.6 120 40.0
CSS0040722 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D110166 3.8e-13 79.0 105 47.6
CSS0007783 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 9.3e-12 74.3 124 41.1
CSS0024820 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.7e-11 72.8 120 41.7
CSS0030269 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D004772 4.6e-11 72.0 77 49.4
CSS0014506 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-09 67.4 126 37.3
Rhsim04G0123900 Rhododendron simsii HOM05D000182 ORTHO05D000112 5.6e-09 65.1 70 48.6
RhsimUnG0237200 Rhododendron simsii HOM05D000002 ORTHO05D013260 7.3e-09 64.7 74 47.3
Atru.chr8.482 Acer truncatum HOM05D000002 ORTHO05D000001 6.2e-08 61.6 133 34.6
Rhsim02G0184000 Rhododendron simsii HOM05D010463 ORTHO05D017724 2.6e-06 56.2 82 41.5


User provided reference genes

Program Settings