Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020838 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 3.2e-60 235.0 123 100.0
CSS0047668 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 3.2e-60 235.0 123 100.0
Hma1.2p1_0133F.1_g061430 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 4.2e-28 128.3 127 60.6
Hma1.2p1_1825F.1_g304390 Hydrangea macrophylla HOM05D004793 ORTHO05D004423 9.3e-28 127.1 127 59.8
Duzib138G1142 Durio zibethinus HOM05D004793 ORTHO05D004423 1.0e-26 123.6 127 56.7
Thecc.01G191000 Theobroma cacao HOM05D004793 ORTHO05D004423 8.7e-26 120.6 127 55.1
QL08p028591 Quercus lobata HOM05D004793 ORTHO05D004423 6.9e-23 110.9 126 51.6
TAR627G0453 Trochodendron aralioides HOM05D004793 ORTHO05D004423 2.9e-21 105.5 127 50.4
Gohir.D07G197000 Gossypium hirsutum HOM05D004793 ORTHO05D004423 1.2e-19 100.1 124 53.2
Gorai.001G220800 Gossypium raimondii HOM05D004793 ORTHO05D004423 1.2e-19 100.1 124 53.2
Gohir.A07G190700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 2.7e-19 99.0 124 52.4
CSS0019001 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 7.9e-19 97.4 134 54.5
Nn1g07451 Nelumbo nucifera HOM05D004793 ORTHO05D004423 1.8e-18 96.3 127 47.2
Ciclev10017917m.g Citrus clementina HOM05D004793 ORTHO05D004423 5.1e-18 94.7 129 48.1
Prupe.3G201300 Prunus persica HOM05D004793 ORTHO05D004423 6.7e-18 94.4 134 45.5
RcHm_v2.0_Chr2g0156651 Rosa chinensis HOM05D004793 ORTHO05D004423 1.1e-17 93.6 130 46.2
CiPaw.03G278900 Carya illinoinensis HOM05D004793 ORTHO05D004423 1.5e-17 93.2 128 47.7
Cpa.g.sc211.5 Carica papaya HOM05D004793 ORTHO05D004423 1.9e-17 92.8 140 46.4
FAN14G5076 Fragaria x ananassa HOM05D004793 ORTHO05D004423 7.4e-17 90.9 130 45.4
Rhsim06G0174500 Rhododendron simsii HOM05D003210 ORTHO05D000001 9.7e-17 90.5 128 49.2
FvH4_6g41090 Fragaria vesca HOM05D004793 ORTHO05D004423 1.3e-16 90.1 130 45.4
GSVIVG01037785001 Vitis vinifera HOM05D004793 ORTHO05D004423 4.8e-16 88.2 127 44.9
Manes.13G062900 Manihot esculenta HOM05D004793 ORTHO05D004423 8.2e-16 87.4 129 48.8
Rhsim04G0038500 Rhododendron simsii HOM05D004793 ORTHO05D004423 1.4e-15 86.7 128 53.1
COL.COLO4_08493 Corchorus olitorius HOM05D004793 ORTHO05D004423 1.8e-15 86.3 136 48.5
GSVIVG01002881001 Vitis vinifera HOM05D000222 ORTHO05D003997 1.8e-15 86.3 132 46.2
Manes.12G061300 Manihot esculenta HOM05D004793 ORTHO05D004423 3.1e-15 85.5 128 50.0
Sabra14G0125700 Salix brachista HOM05D004793 ORTHO05D004423 4.1e-15 85.1 139 45.3
Cpa.g.sc2750.2 Carica papaya HOM05D004793 ORTHO05D004423 5.3e-15 84.7 127 45.7
Actinidia21442 Actinidia chinensis HOM05D004793 ORTHO05D004423 6.9e-15 84.3 109 52.3
Atru.chr6.3360 Acer truncatum HOM05D004793 ORTHO05D004423 1.2e-14 83.6 134 47.0
TPR.G1320 Trifolium pratense HOM05D004793 ORTHO05D004423 1.2e-14 83.6 123 43.1
Nn1g03234 Nelumbo nucifera HOM05D004793 ORTHO05D004423 2.0e-14 82.8 126 41.3
Aqoxy4G02224 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 2.6e-14 82.4 133 42.9
Medtr5g097300 Medicago truncatula HOM05D004793 ORTHO05D004423 1.7e-13 79.7 123 42.3
Oeu063642.1 Olea europaea HOM05D004793 ORTHO05D004423 3.8e-13 78.6 129 44.2
Potri.014G165000 Populus trichocarpa HOM05D004793 ORTHO05D004423 8.5e-13 77.4 141 44.0
Manes.03G138300 Manihot esculenta HOM05D004793 ORTHO05D004423 1.4e-12 76.6 127 37.8
Ca_06456_v3 Cicer arietinum L. HOM05D004793 ORTHO05D004423 2.5e-12 75.9 125 44.0
PGR142G2586 Punica granatum HOM05D004793 ORTHO05D004423 7.2e-12 74.3 132 42.4
Glyma.02G305500 Glycine max HOM05D004793 ORTHO05D004423 1.2e-11 73.6 129 44.2
TWI36G0659 Tripterygium wilfordii HOM05D004793 ORTHO05D004423 1.2e-11 73.6 136 40.4
MELO3C024110.2 Cucumis melo HOM05D004793 ORTHO05D004423 3.6e-11 72.0 128 41.4
LjContig00081g0018270 Lotus japonicus HOM05D004793 ORTHO05D004423 3.6e-11 72.0 132 43.9
Eucgr.D01438 Eucalyptus grandis HOM05D004793 ORTHO05D004423 6.1e-11 71.2 141 41.1
Potri.001G362000 Populus trichocarpa HOM05D004793 ORTHO05D004423 6.1e-11 71.2 126 38.9
Sed0008787 Sechium edule HOM05D004793 ORTHO05D004423 7.9e-11 70.9 126 39.7
Phvul.006G141500 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 1.8e-10 69.7 141 39.7
Psat2g004520 Pisum sativum HOM05D004793 ORTHO05D004423 1.8e-10 69.7 129 42.6
Potri.016G009200 Populus trichocarpa HOM05D004793 ORTHO05D004423 1.8e-10 69.7 137 38.7
Aqoxy1G04226 Aquilegia oxysepala HOM05D004793 ORTHO05D004423 2.3e-10 69.3 132 39.4
Lalb_Chr15g0088081 Lupinus albus HOM05D004793 ORTHO05D004423 5.1e-10 68.2 142 35.2
Glyma.14G007800 Glycine max HOM05D004793 ORTHO05D004423 8.8e-10 67.4 128 43.0
Lalb_Chr04g0247291 Lupinus albus HOM05D004793 ORTHO05D004423 8.8e-10 67.4 125 41.6
Lalb_Chr04g0247481 Lupinus albus HOM05D004793 ORTHO05D004423 8.8e-10 67.4 125 41.6
CSS0021588 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 1.5e-09 66.6 126 36.5
CiPaw.12G136200 Carya illinoinensis HOM05D004793 ORTHO05D004423 1.5e-09 66.6 128 43.0
Glyma.09G012000 Glycine max HOM05D004793 ORTHO05D004423 1.5e-09 66.6 145 37.2
Thecc.06G236700 Theobroma cacao HOM05D004793 ORTHO05D004423 1.5e-09 66.6 139 42.4
Oeu029974.1 Olea europaea HOM05D027131 ORTHO05D013900 2.0e-09 66.2 96 43.8
Sabra16G0013200 Salix brachista HOM05D004793 ORTHO05D004423 2.0e-09 66.2 136 38.2
Gohir.D01G074100 Gossypium hirsutum HOM05D004793 ORTHO05D004423 3.3e-09 65.5 123 42.3
Glyma.15G116700 Glycine max HOM05D004793 ORTHO05D004423 4.4e-09 65.1 140 37.1
Phvul.008G285200 Phaseolus vulgaris HOM05D004793 ORTHO05D004423 5.7e-09 64.7 127 39.4
Sabra06G0011800 Salix brachista HOM05D004793 ORTHO05D004423 5.7e-09 64.7 139 36.7
Cfa020226 Carpinus fangiana HOM05D004793 ORTHO05D004423 7.4e-09 64.3 123 39.0
Oeu057608.1 Olea europaea HOM05D004793 ORTHO05D004423 7.4e-09 64.3 131 40.5
Oeu064364.1 Olea europaea HOM05D004793 ORTHO05D004423 7.4e-09 64.3 131 40.5
ClCG02G002720 Citrullus lanatus HOM05D000222 ORTHO05D003997 9.7e-09 63.9 115 40.9
Lsat_1_v5_gn_5_121620 Lactuca sativa HOM05D004793 ORTHO05D004423 1.3e-08 63.5 132 37.1
Psat1g178240 Pisum sativum HOM05D004793 ORTHO05D004423 1.3e-08 63.5 138 39.1
PGR004G1083 Punica granatum HOM05D004793 ORTHO05D004423 1.3e-08 63.5 144 41.7
Eucgr.K00650 Eucalyptus grandis HOM05D004793 ORTHO05D004423 1.7e-08 63.2 134 41.0
Haze_09795 Corylus avellana HOM05D004793 ORTHO05D004423 2.2e-08 62.8 123 39.0
Potri.011G086300 Populus trichocarpa HOM05D004793 ORTHO05D004423 2.2e-08 62.8 107 41.1
CsaV3_7G023710 Cucumis sativus L. HOM05D004793 ORTHO05D004423 2.8e-08 62.4 97 44.3
Duzib192G0740 Durio zibethinus HOM05D004793 ORTHO05D004423 2.8e-08 62.4 137 37.2
Lj6g0021600 Lotus japonicus HOM05D004793 ORTHO05D004423 2.8e-08 62.4 137 40.9
CAN.G1397.7 Capsicum annuum HOM05D037802 ORTHO05D004423 3.7e-08 62.0 136 38.2
CiPaw.11G201300 Carya illinoinensis HOM05D004793 ORTHO05D004423 3.7e-08 62.0 127 38.6
VMungo0647G0475 Vigna mungo HOM05D004793 ORTHO05D004423 3.7e-08 62.0 136 39.0
CSS0022938 Camellia sinensis var. sinensis HOM05D004793 ORTHO05D004423 4.8e-08 61.6 126 36.5
Cc09_g04750 Coffea canephora HOM05D004793 ORTHO05D004423 4.8e-08 61.6 131 35.9
Haze_06976 Corylus avellana HOM05D004793 ORTHO05D004423 4.8e-08 61.6 136 37.5
Manes.15G062700 Manihot esculenta HOM05D004793 ORTHO05D004423 4.8e-08 61.6 127 37.8
TPR.G10593 Trifolium pratense HOM05D004793 ORTHO05D004423 4.8e-08 61.6 46 65.2
Potri.006G016500 Populus trichocarpa HOM05D004793 ORTHO05D004423 6.3e-08 61.2 140 36.4
Thecc.07G019600 Theobroma cacao HOM05D004793 ORTHO05D004423 6.3e-08 61.2 129 39.5
Duzib170G0463 Durio zibethinus HOM05D004793 ORTHO05D004423 8.2e-08 60.8 126 40.5
Duzib170G0743 Durio zibethinus HOM05D004793 ORTHO05D004423 8.2e-08 60.8 126 40.5
Gohir.A01G087700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 1.1e-07 60.5 127 39.4
Cfa000070 Carpinus fangiana HOM05D004793 ORTHO05D004423 1.4e-07 60.1 134 37.3
Cc02_g34950 Coffea canephora HOM05D004793 ORTHO05D004423 1.4e-07 60.1 141 36.9
Gorai.010G188500 Gossypium raimondii HOM05D004793 ORTHO05D004423 1.8e-07 59.7 152 36.8
Rhsim13G0143200 Rhododendron simsii HOM05D004793 ORTHO05D004423 1.8e-07 59.7 142 36.6
Glyma.17G007500 Glycine max HOM05D004793 ORTHO05D004423 2.4e-07 59.3 137 40.1
Gohir.A07G087700 Gossypium hirsutum HOM05D004793 ORTHO05D004423 2.4e-07 59.3 125 42.4
Gorai.001G099200 Gossypium raimondii HOM05D004793 ORTHO05D004423 3.1e-07 58.9 124 40.3
Ciclev10010582m.g Citrus clementina HOM05D004793 ORTHO05D004423 4.1e-07 58.5 114 41.2
Rhsim04G0014600 Rhododendron simsii HOM05D004793 ORTHO05D004423 4.1e-07 58.5 129 38.0
Gohir.D07G092600 Gossypium hirsutum HOM05D004793 ORTHO05D004423 5.3e-07 58.2 124 40.3
Medtr2g026510 Medicago truncatula HOM05D004793 ORTHO05D004423 5.3e-07 58.2 146 35.6
Gohir.D06G161500 Gossypium hirsutum HOM05D004793 ORTHO05D004423 7.0e-07 57.8 152 36.2
ATR0712G036 Amborella trichopoda HOM05D004793 ORTHO05D004423 9.1e-07 57.4 137 38.7
Migut.M00035 Erythranthe guttata HOM05D004793 ORTHO05D004423 1.2e-06 57.0 130 39.2
Eucgr.A01045 Eucalyptus grandis HOM05D004793 ORTHO05D004423 1.2e-06 57.0 135 36.3
Glyma.07G266600 Glycine max HOM05D004793 ORTHO05D004423 1.2e-06 57.0 135 37.8
MSTRG.7149 Avicennia marina HOM05D004793 ORTHO05D004423 1.5e-06 56.6 137 37.2
Psat4g002280 Pisum sativum HOM05D004793 ORTHO05D004423 1.5e-06 56.6 136 39.7
VMungo0540G1724 Vigna mungo HOM05D004793 ORTHO05D004423 1.5e-06 56.6 135 37.8
Sed0024469 Sechium edule HOM05D004793 ORTHO05D004423 2.0e-06 56.2 114 39.5
CiPaw.10G079700 Carya illinoinensis HOM05D004793 ORTHO05D004423 3.4e-06 55.5 143 36.4
SalBow7G3719 Salvia bowleyana HOM05D004793 ORTHO05D004423 3.4e-06 55.5 43 60.5
CAN.G294.21 Capsicum annuum HOM05D004793 ORTHO05D004423 4.5e-06 55.1 130 36.9
HPP92_012227 Vanilla planifolia HOM05D004793 ORTHO05D004423 4.5e-06 55.1 118 33.1
DCAR_019706 Daucus carota HOM05D004793 ORTHO05D004423 5.9e-06 54.7 126 39.7
Prupe.4G234900 Prunus persica HOM05D004793 ORTHO05D004423 5.9e-06 54.7 136 34.6
Haze_12687 Corylus avellana HOM05D004793 ORTHO05D004423 7.7e-06 54.3 136 33.1
DCAR_030858 Daucus carota HOM05D004793 ORTHO05D004423 7.7e-06 54.3 129 34.9


User provided reference genes

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