Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020837 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-59 233.0 110 100.0
CSS0029089 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-21 106.7 90 50.0
CSS0039659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.9e-20 101.3 104 44.2
CSS0026765 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-17 92.8 98 41.8
CSS0001091 Camellia sinensis var. sinensis HOM05D039892 ORTHO05D013815 8.7e-17 90.5 92 41.3
CSS0028288 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.7e-17 90.5 79 50.6
CSS0022483 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.1e-16 90.1 90 43.3
CSS0038721 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.5e-16 89.7 90 43.3
CSS0016037 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.9e-16 89.4 89 55.1
CSS0017940 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.9e-16 89.4 89 55.1
CSS0028483 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.9e-16 89.4 79 51.9
CSS0039930 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.9e-16 89.4 90 43.3
CSS0011659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.5e-16 89.0 87 42.5
CSS0026307 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.5e-16 89.0 98 39.8
CSS0002270 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-15 86.3 91 39.6
CSS0037039 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-15 86.3 90 46.7
CSS0039671 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.4e-14 83.2 90 41.1
CSS0006402 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.4e-14 82.4 70 51.4
CSS0014831 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.9e-14 80.9 76 46.1
CSS0001040 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.0e-14 80.5 90 38.9
CSS0021010 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.6e-13 79.0 90 34.4
CSS0005179 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 1.7e-12 76.3 79 41.8
CSS0007419 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.2e-11 72.0 75 44.0
Ah.03g141460 Amaranthus hybridus HOM05D026865 ORTHO05D023374 2.3e-09 65.9 100 32.0
CSS0007673 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.3e-09 65.9 62 43.5
CSS0011675 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 6.6e-09 64.3 68 42.6
Atru.chr2.3295 Acer truncatum HOM05D000003 ORTHO05D000004 8.7e-09 63.9 90 31.1
CSS0010661 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.5e-08 63.2 66 39.4
PSO675G5246 Papaver somniferum HOM05D000003 ORTHO05D000004 1.9e-08 62.8 104 30.8
MBI15_g00074_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 5.6e-08 61.2 90 31.1
TWI36G1780 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 1.6e-07 59.7 95 29.5
QL09p039572 Quercus lobata HOM05D006747 ORTHO05D008384 2.1e-07 59.3 100 32.0
Atru.chr11.2510 Acer truncatum HOM05D000003 ORTHO05D000004 2.8e-07 58.9 98 26.5
CSS0017847 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.1e-07 57.4 60 41.7
MBI02_g21885_MAGBIO Magnolia biondii HOM05D003439 ORTHO05D004062 8.1e-07 57.4 107 28.0
MBI15_g31036_MAGBIO Magnolia biondii HOM05D007303 ORTHO05D009231 8.1e-07 57.4 94 31.9
Ah.06g185410 Amaranthus hybridus HOM05D000003 ORTHO05D000004 1.4e-06 56.6 93 32.3
QL02p081065 Quercus lobata HOM05D000003 ORTHO05D000004 1.8e-06 56.2 100 31.0
TWI39G0070 Tripterygium wilfordii HOM05D000003 ORTHO05D002259 2.4e-06 55.8 90 28.9
Ah.13g066570 Amaranthus hybridus HOM05D026865 ORTHO05D023374 3.1e-06 55.5 87 34.5
CSS0014107 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.1e-06 55.5 51 39.2
CSS0014949 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.1e-06 55.5 60 38.3
CSS0019468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.1e-06 55.5 51 39.2
CSS0041269 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.1e-06 55.5 60 38.3
Lj6g0025281 Lotus japonicus HOM05D000003 ORTHO05D000004 3.1e-06 55.5 112 30.4
Atru.chr7.919 Acer truncatum HOM05D000003 ORTHO05D000004 4.0e-06 55.1 92 30.4
CSS0008549 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.0e-06 55.1 50 42.0
CSS0006262 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.3e-06 54.7 89 28.1
SHI09341 Sapria himalayana HOM05D000003 ORTHO05D000004 5.3e-06 54.7 98 27.6
SHI14108 Sapria himalayana HOM05D002164 ORTHO05D000004 5.3e-06 54.7 98 27.6
QL06p005440 Quercus lobata HOM05D000003 ORTHO05D000004 6.9e-06 54.3 98 30.6
CSS0006080 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.0e-06 53.9 60 36.7
CSS0024939 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.0e-06 53.9 60 38.3
MBI14_g15700_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 9.0e-06 53.9 90 31.1
PSO063G3379 Papaver somniferum HOM05D000003 ORTHO05D000004 9.0e-06 53.9 94 29.8


User provided reference genes

Program Settings