Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 1.1e-218 763.1 399 100.0
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 4.1e-165 585.1 398 72.6
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 3.0e-160 568.9 392 72.4
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 3.9e-160 568.5 390 71.3
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 1.1e-159 567.0 393 72.5
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 4.1e-157 558.5 400 68.5
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 4.7e-153 545.0 384 69.3
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 1.5e-151 540.0 391 67.8
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 3.3e-151 538.9 389 65.8
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 5.7e-151 538.1 356 74.2
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 1.7e-150 536.6 392 67.3
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 1.7e-150 536.6 399 65.4
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 2.8e-150 535.8 396 66.2
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 6.3e-150 534.6 389 66.1
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 8.2e-150 534.3 399 66.7
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 1.8e-149 533.1 391 66.0
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 1.5e-148 530.0 405 66.4
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 3.5e-148 528.9 385 67.8
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 2.9e-147 525.8 385 67.3
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 5.0e-147 525.0 391 65.7
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 8.5e-147 524.2 391 67.0
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 8.5e-147 524.2 385 67.5
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.5e-146 523.5 306 78.4
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 1.5e-146 523.5 394 64.2
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 4.2e-146 521.9 388 66.5
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 4.2e-146 521.9 388 66.5
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 7.2e-146 521.2 388 67.8
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 7.2e-146 521.2 386 66.6
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 1.2e-145 520.4 383 64.2
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 2.7e-145 519.2 354 72.3
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 6.1e-145 518.1 407 64.4
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 1.8e-144 516.5 400 63.8
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 3.9e-144 515.4 387 65.4
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 5.2e-144 515.0 383 65.5
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 6.7e-144 514.6 383 65.5
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 1.1e-143 513.8 392 64.5
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 7.4e-143 511.1 388 65.2
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 1.3e-142 510.4 383 64.2
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 2.2e-142 509.6 383 63.7
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 4.8e-142 508.4 398 63.8
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 6.3e-142 508.1 404 62.4
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 8.2e-142 507.7 393 64.6
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 8.2e-142 507.7 396 63.1
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 4.1e-141 505.4 388 64.4
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 5.3e-141 505.0 405 61.5
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 1.2e-140 503.8 397 64.0
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 1.2e-140 503.8 410 60.7
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 1.6e-140 503.4 386 62.7
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 2.0e-140 503.1 387 63.8
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 2.0e-140 503.1 384 63.5
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 2.0e-140 503.1 383 62.7
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 5.9e-140 501.5 307 75.6
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 7.7e-140 501.1 393 63.1
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 1.3e-139 500.4 393 63.1
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 1.3e-139 500.4 397 63.2
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.3e-139 500.4 415 60.7
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 2.2e-139 499.6 397 62.0
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 2.2e-139 499.6 396 61.9
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 2.9e-139 499.2 348 69.3
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 2.9e-139 499.2 396 64.9
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 3.8e-139 498.8 402 61.2
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 3.8e-139 498.8 402 61.2
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 3.8e-139 498.8 402 61.2
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 3.8e-139 498.8 393 66.9
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 5.0e-139 498.4 405 61.0
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 8.5e-139 497.7 387 63.6
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 1.1e-138 497.3 397 61.5
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.9e-138 496.5 387 63.3
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 1.9e-138 496.5 413 62.7
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 2.5e-138 496.1 399 61.7
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 2.5e-138 496.1 387 62.8
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 2.5e-138 496.1 401 64.3
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 3.2e-138 495.7 412 61.2
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 3.2e-138 495.7 405 64.4
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 1.2e-137 493.8 399 61.9
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 2.7e-137 492.7 397 61.0
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 2.7e-137 492.7 386 62.4
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 3.6e-137 492.3 397 61.0
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 3.6e-137 492.3 393 62.1
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 3.6e-137 492.3 384 63.0
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 8.0e-137 491.1 378 63.8
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 1.8e-136 490.0 408 60.5
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 8.8e-136 487.6 401 60.3
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 8.8e-136 487.6 401 60.3
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 8.8e-136 487.6 401 60.3
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 8.8e-136 487.6 387 63.3
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 3.4e-135 485.7 386 63.5
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 4.4e-135 485.3 398 60.1
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 5.7e-135 485.0 390 60.8
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 5.7e-135 485.0 386 61.7
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 7.5e-135 484.6 410 62.4
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 9.8e-135 484.2 383 60.6
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 6.3e-134 481.5 307 72.6
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 8.3e-134 481.1 387 62.0
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 1.4e-133 480.3 387 62.3
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 1.8e-133 479.9 386 60.9
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 2.4e-133 479.6 308 73.7
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 1.2e-132 477.2 386 61.4
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 1.6e-132 476.9 376 63.0
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 3.5e-132 475.7 377 62.9
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 7.7e-132 474.6 387 62.3
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 2.2e-131 473.0 308 71.4
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 6.5e-131 471.5 393 59.8
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 2.1e-129 466.5 387 59.9
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 3.6e-129 465.7 385 60.3
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 4.7e-129 465.3 382 60.2
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 4.7e-129 465.3 391 61.1
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 5.2e-128 461.8 314 68.5
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 8.8e-128 461.1 295 70.8
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 4.4e-127 458.8 354 63.6
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 9.8e-127 457.6 391 58.3
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 3.7e-126 455.7 386 58.5
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 3.7e-126 455.7 307 66.1
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 1.8e-125 453.4 309 67.3
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 7.0e-125 451.4 311 65.3
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 1.6e-121 440.3 399 57.1
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 3.0e-120 436.0 379 59.4
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 2.6e-119 433.0 356 60.1
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 4.4e-119 432.2 314 65.9
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 2.2e-118 429.9 407 56.8
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 3.7e-118 429.1 310 65.8
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 6.4e-118 428.3 382 59.2
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 2.4e-117 426.4 383 59.3
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 5.4e-117 425.2 308 63.6
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 5.4e-117 425.2 317 65.0
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 1.2e-116 424.1 354 60.7
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 1.6e-116 423.7 404 54.0
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 2.9e-115 419.5 354 60.5
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 3.9e-115 419.1 329 61.4
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 5.0e-115 418.7 424 53.5
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 5.0e-115 418.7 305 63.9
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 1.1e-114 417.5 386 57.0
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 2.1e-113 413.3 391 55.8
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.8e-113 412.9 301 62.5
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 4.7e-113 412.1 379 52.5
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 2.9e-110 402.9 291 62.9
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 6.4e-110 401.7 253 71.5
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.2e-108 397.5 311 60.5
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 3.0e-107 392.9 311 59.8
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 1.0e-99 367.9 221 76.9
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 3.3e-98 362.8 389 52.2
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 3.3e-98 362.8 309 55.7
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 8.9e-96 354.8 309 54.4
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 3.7e-94 349.4 307 55.0
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 8.4e-94 348.2 330 51.2
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 2.4e-93 346.7 298 60.4
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 3.5e-92 342.8 307 53.1
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.9e-91 339.3 305 53.1
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 3.9e-91 339.3 213 71.4
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 2.8e-89 333.2 268 59.0
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 4.7e-89 332.4 317 51.4
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 9.9e-87 324.7 305 52.5
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 4.9e-86 322.4 203 72.4
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 8.4e-86 321.6 203 70.9
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 7.1e-85 318.5 307 51.1
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 6.9e-80 302.0 326 47.2
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 2.6e-79 300.1 203 66.5
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 2.6e-79 300.1 307 47.6
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 2.2e-78 297.0 298 47.7
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 6.0e-76 288.9 349 46.1
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 3.3e-74 283.1 203 63.5
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 6.9e-72 275.4 383 41.0
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.2e-69 266.5 300 44.7
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.3e-67 261.2 291 45.4
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.3e-67 261.2 324 41.4
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 8.7e-67 258.5 314 42.0
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.1e-66 258.1 303 41.6
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 2.9e-62 243.4 214 54.2
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.2e-60 238.0 310 39.4
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 2.9e-54 216.9 317 39.1
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 2.2e-41 174.1 152 59.9
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 2.2e-38 164.1 154 53.9
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 4.8e-25 119.8 386 26.2
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 2.4e-24 117.5 114 47.4
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 5.7e-18 96.3 100 44.0
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 7.5e-18 95.9 127 48.0
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.5e-13 81.6 97 42.3
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 6.1e-12 76.3 48 62.5
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 7.5e-10 69.3 87 43.7
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 6.3e-09 66.2 52 50.0
Prupe.6G163800 Prunus persica HOM05D003764 ORTHO05D335910 1.8e-08 64.7 47 70.2
Nn1g01454 Nelumbo nucifera HOM05D003764 ORTHO05D004356 3.8e-06 57.0 33 75.8


User provided reference genes

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