Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020802 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 2.9e-45 184.9 95 100.0
CSS0039481 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 7.4e-33 143.7 94 81.9
CSS0008627 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 2.2e-32 142.1 85 85.9
CSS0028529 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 2.2e-32 142.1 85 85.9
CSS0002432 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-30 134.4 121 62.8
CSS0038420 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-25 119.0 110 61.8
CSS0019150 Camellia sinensis var. sinensis HOM05D000936 ORTHO05D005107 1.3e-24 116.3 94 64.9
CSS0005907 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 4.0e-18 94.7 94 60.6
CSS0030944 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.6e-14 82.8 75 57.3
CSS0006946 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 5.9e-14 80.9 94 52.1
CSS0031115 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 6.5e-13 77.4 57 68.4
CSS0015818 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.2e-12 75.1 63 60.3
CAN.G27.28 Capsicum annuum HOM05D005075 ORTHO05D007097 1.6e-11 72.8 90 42.2
CSS0030070 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 2.8e-11 72.0 86 46.5
CSS0048496 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.8e-11 72.0 42 81.0
QL02p002557 Quercus lobata HOM05D000002 ORTHO05D000001 1.4e-10 69.7 106 38.7
QL12p040299 Quercus lobata HOM05D000002 ORTHO05D000001 1.4e-10 69.7 106 38.7
SHI20719 Sapria himalayana HOM05D000002 ORTHO05D000001 1.8e-10 69.3 92 42.4
SHI04754 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-09 65.1 104 38.5
SHI27171 Sapria himalayana HOM05D000002 ORTHO05D000001 3.4e-09 65.1 119 34.5
CSS0037636 Camellia sinensis var. sinensis HOM05D011157 ORTHO05D013820 4.4e-09 64.7 75 49.3
Oeu026778.1 Olea europaea HOM05D000002 ORTHO05D000001 1.3e-08 63.2 105 34.3
SHI26071 Sapria himalayana HOM05D000002 ORTHO05D009886 1.3e-08 63.2 77 45.5
SHI30681 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-08 63.2 81 43.2
SHI20574 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-08 62.8 92 40.2
TAR332G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 2.2e-08 62.4 102 35.3
CSS0027002 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 2.8e-08 62.0 86 46.5
SHI34517 Sapria himalayana HOM05D000002 ORTHO05D000001 2.8e-08 62.0 119 34.5
CSS0039790 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 3.7e-08 61.6 69 46.4
Oeu028933.2 Olea europaea HOM05D000002 ORTHO05D000001 4.9e-08 61.2 117 35.0
SHI11625 Sapria himalayana HOM05D000002 ORTHO05D000001 4.9e-08 61.2 104 34.6
SHI18518 Sapria himalayana HOM05D000002 ORTHO05D000001 2.4e-07 58.9 104 35.6
SHI00069 Sapria himalayana HOM05D000002 ORTHO05D009886 3.1e-07 58.5 77 41.6
Manes.08G119311 Manihot esculenta HOM05D011157 ORTHO05D000001 4.1e-07 58.2 102 35.3
CSS0018666 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 5.4e-07 57.8 48 52.1
SHI12075 Sapria himalayana HOM05D000002 ORTHO05D000001 7.0e-07 57.4 104 35.6
SHI27433 Sapria himalayana HOM05D000002 ORTHO05D000001 1.2e-06 56.6 119 31.9
CSS0046737 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 2.0e-06 55.8 94 37.2
SHI14083 Sapria himalayana HOM05D000002 ORTHO05D000001 2.7e-06 55.5 104 35.6
TAR032G0001 Trochodendron aralioides HOM05D000054 ORTHO05D002584 2.7e-06 55.5 85 38.8
SHI27156 Sapria himalayana HOM05D000002 ORTHO05D000001 3.5e-06 55.1 104 34.6
Thecc.05G175700 Theobroma cacao HOM05D000002 ORTHO05D000001 3.5e-06 55.1 102 34.3
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.5e-06 54.7 52 50.0
Manes.15G035050 Manihot esculenta HOM05D007305 ORTHO05D009886 4.5e-06 54.7 103 35.0
CSS0026513 Camellia sinensis var. sinensis HOM05D011276 ORTHO05D013043 5.9e-06 54.3 94 37.2
Manes.18G145666 Manihot esculenta HOM05D000002 ORTHO05D000047 5.9e-06 54.3 104 34.6


User provided reference genes

Program Settings