Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020797 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 7.2e-113 410.6 211 100.0
CSS0025371 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.8e-112 408.7 211 99.5
CSS0037763 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.8e-112 408.7 211 99.5
CSS0040065 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.8e-112 408.7 211 99.5
CSS0004858 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.7e-112 407.9 211 99.1
CSS0001168 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.6e-110 402.1 211 98.1
CSS0032680 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 9.5e-105 383.6 202 98.0
CSS0042852 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 2.1e-104 382.5 211 94.8
CSS0010108 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 4.7e-104 381.3 211 94.3
CSS0035203 Camellia sinensis var. sinensis HOM05D008080 ORTHO05D010244 1.1e-87 327.0 195 89.7
Actinidia22242 Actinidia chinensis HOM05D008080 ORTHO05D010244 1.2e-51 207.2 188 65.4
Lj2A146T28 Lonicera japonica HOM05D008080 ORTHO05D010244 2.4e-39 166.4 150 62.7
Rhsim02G0256000 Rhododendron simsii HOM05D008080 ORTHO05D010244 5.3e-39 165.2 224 50.4
QL02p026515 Quercus lobata HOM05D008080 ORTHO05D010244 6.5e-37 158.3 131 64.9
Thecc.03G213000 Theobroma cacao HOM05D008080 ORTHO05D010244 2.5e-36 156.4 105 78.1
DCAR_028394 Daucus carota HOM05D008080 ORTHO05D010244 6.1e-35 151.8 111 71.2
Gohir.A03G078700 Gossypium hirsutum HOM05D008080 ORTHO05D010244 7.9e-35 151.4 129 62.8
Gohir.D03G089300 Gossypium hirsutum HOM05D008080 ORTHO05D010244 3.0e-34 149.4 129 62.8
Lsat_1_v5_gn_3_13260 Lactuca sativa HOM05D008080 ORTHO05D010244 3.0e-34 149.4 116 64.7
Potri.011G147000 Populus trichocarpa HOM05D008080 ORTHO05D010244 3.9e-34 149.1 148 59.5
GSVIVG01019727001 Vitis vinifera HOM05D008080 ORTHO05D006305 3.9e-34 149.1 158 57.0
MBI04_g15074_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 6.7e-34 148.3 107 69.2
Potri.001G454900 Populus trichocarpa HOM05D008080 ORTHO05D010244 6.7e-34 148.3 135 60.7
Duzib205G0863 Durio zibethinus HOM05D008080 ORTHO05D010244 8.8e-34 147.9 105 74.3
CiPaw.11G105600 Carya illinoinensis HOM05D008080 ORTHO05D010244 4.3e-33 145.6 117 65.0
CANSAT21G2269 Cannabis sativa HOM05D008080 ORTHO05D010244 5.7e-33 145.2 140 56.4
Aqoxy5G03619 Aquilegia oxysepala HOM05D008080 ORTHO05D010244 1.7e-32 143.7 117 64.1
MD06G1128100 Malus domestica HOM05D008080 ORTHO05D010244 1.7e-32 143.7 113 65.5
Prupe.5G137900 Prunus persica HOM05D008080 ORTHO05D010244 3.7e-32 142.5 113 66.4
PGR031G3362 Punica granatum HOM05D008080 ORTHO05D010244 6.9e-31 138.3 177 50.8
FvH4_5g10080 Fragaria vesca HOM05D008080 ORTHO05D010244 9.1e-31 137.9 125 61.6
FAN18G1060 Fragaria x ananassa HOM05D008080 ORTHO05D010244 9.1e-31 137.9 125 61.6
HanXRQChr17g0534021 Helianthus annuus HOM05D008080 ORTHO05D010244 1.2e-30 137.5 116 62.1
RcHm_v2.0_Chr7g0188191 Rosa chinensis HOM05D008080 ORTHO05D010244 1.5e-30 137.1 165 52.1
FAN08G1106 Fragaria x ananassa HOM05D008080 ORTHO05D010244 3.4e-30 136.0 125 60.8
CDE09G0306 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 1.0e-29 134.4 117 59.8
CDE11G0346 Ceratophyllum demersum HOM05D008080 ORTHO05D010244 5.0e-29 132.1 117 58.1
ECA246G2048 Erigeron canadensis HOM05D008080 ORTHO05D010244 1.1e-28 131.0 114 59.6
TWI81G0982 Tripterygium wilfordii HOM05D008080 ORTHO05D010244 3.6e-27 125.9 108 64.8
Os04g0577800 Oryza sativa ssp. japonica HOM05D008080 ORTHO05D010244 6.1e-27 125.2 115 58.3
Carub.0001s3146 Capsella rubella HOM05D008080 ORTHO05D010244 7.9e-27 124.8 117 56.4
A09p32970 Brassica napus HOM05D008080 ORTHO05D010244 2.3e-26 123.2 104 62.5
Aa31LG6G7790 Aethionema arabicum HOM05D008080 ORTHO05D010244 3.9e-26 122.5 121 57.0
Thhalv10008894m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 3.9e-26 122.5 104 61.5
Zm00001eb073300 Zea mays HOM05D008080 ORTHO05D010244 3.9e-26 122.5 115 57.4
AL1G47660 Arabidopsis lyrata HOM05D008080 ORTHO05D010244 6.7e-26 121.7 117 57.3
BcaC08g43879 Brassica carinata HOM05D008080 ORTHO05D010244 6.7e-26 121.7 104 61.5
BolC6t36418H Brassica oleracea HOM05D008080 ORTHO05D010244 6.7e-26 121.7 104 61.5
BraA09t38837Z Brassica rapa HOM05D008080 ORTHO05D010244 6.7e-26 121.7 104 61.5
Sp1g28720 Schrenkiella parvula HOM05D008080 ORTHO05D010244 8.8e-26 121.3 117 58.1
Nn5g27399 Nelumbo nucifera HOM05D008080 ORTHO05D010244 1.1e-25 120.9 99 63.6
AT1G33265 Arabidopsis thaliana HOM05D008080 ORTHO05D010244 1.5e-25 120.6 117 57.3
C06p12680 Brassica napus HOM05D008080 ORTHO05D010244 2.0e-25 120.2 104 60.6
CARHR032630 Cardamine hirsuta HOM05D008080 ORTHO05D010244 2.0e-25 120.2 103 62.1
FAN04G0887 Fragaria x ananassa HOM05D008080 ORTHO05D010244 2.0e-25 120.2 131 55.0
Gorai.003G072100 Gossypium raimondii HOM05D008080 ORTHO05D010244 9.7e-25 117.9 95 62.1
THA.LOC104806472 Tarenaya hassleriana HOM05D008080 ORTHO05D010244 1.3e-24 117.5 113 56.6
BcaB07g32963 Brassica carinata HOM05D008080 ORTHO05D010244 1.7e-24 117.1 104 59.6
Thhalv10008954m.g Eutrema salsugineum HOM05D008080 ORTHO05D010244 2.2e-24 116.7 117 56.4
SMO114G0056 Selaginella moellendorffii HOM05D008080 ORTHO05D010244 8.2e-24 114.8 106 58.5
Pp3c4_29930 Physcomitrium patens HOM05D008080 ORTHO05D010244 4.1e-23 112.5 142 44.4
Pp3c4_29940 Physcomitrium patens HOM05D008080 ORTHO05D010244 4.1e-23 112.5 142 44.4
HPP92_014501 Vanilla planifolia HOM05D008080 ORTHO05D010244 7.0e-23 111.7 105 54.3
COL.COLO4_20927 Corchorus olitorius HOM05D008080 ORTHO05D010244 7.7e-22 108.2 80 68.8
Sabra16G0307700 Salix brachista HOM05D008080 ORTHO05D010244 5.0e-21 105.5 236 34.7
ATR0620G064 Amborella trichopoda HOM05D008080 ORTHO05D010244 3.6e-19 99.4 82 63.4
MBI04_g47856_MAGBIO Magnolia biondii HOM05D008080 ORTHO05D010244 9.7e-17 91.3 55 78.2
Dinv03669 Davidia involucrata HOM05D008080 ORTHO05D010244 1.3e-16 90.9 63 73.0
CBR_g15957 Chara braunii HOM05D000019 ORTHO05D000002 4.8e-16 89.0 99 48.5
Cpa.g.sc37.123 Carica papaya HOM05D008080 ORTHO05D010244 8.0e-11 71.6 67 62.7
Eucgr.D02545 Eucalyptus grandis HOM05D008080 ORTHO05D010244 2.6e-09 66.6 78 53.8
Sabra11G0132200 Salix brachista HOM05D008080 ORTHO05D010244 5.4e-07 58.9 100 42.0


User provided reference genes

Program Settings