Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 6.0e-98 360.9 193 100.0
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 3.4e-93 345.1 196 96.9
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 1.4e-65 253.4 197 75.1
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 4.5e-61 238.4 204 70.1
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 1.7e-60 236.5 169 74.6
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 4.2e-59 231.9 204 69.6
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 4.2e-59 231.9 195 71.3
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 1.6e-58 229.9 195 67.2
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.4e-57 226.9 197 68.0
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 1.4e-57 226.9 197 68.0
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 1.1e-56 223.8 165 72.7
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 2.6e-56 222.6 197 67.5
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 3.3e-56 222.2 181 68.0
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 5.7e-56 221.5 226 61.9
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 1.3e-55 220.3 196 69.4
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 1.7e-55 219.9 184 69.6
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 2.8e-55 219.2 186 66.7
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 1.2e-53 213.8 199 64.8
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 1.6e-53 213.4 171 67.8
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 2.6e-53 212.6 194 66.5
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 4.5e-53 211.8 210 63.3
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 4.5e-53 211.8 172 66.9
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 5.9e-53 211.5 172 66.9
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 1.9e-51 206.5 200 62.0
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 1.6e-50 203.4 198 61.6
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 3.6e-50 202.2 168 68.5
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 3.6e-50 202.2 204 58.8
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 6.1e-50 201.4 207 58.5
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 8.0e-50 201.1 170 65.3
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 8.0e-50 201.1 171 64.3
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 1.0e-49 200.7 198 61.6
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 1.0e-49 200.7 193 59.6
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 1.0e-49 200.7 194 59.3
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 1.0e-49 200.7 191 62.8
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 1.4e-49 200.3 153 69.3
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 2.3e-49 199.5 192 58.9
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 5.2e-49 198.4 184 65.2
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 6.8e-49 198.0 204 61.3
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 6.8e-49 198.0 225 56.0
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 6.8e-49 198.0 175 63.4
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 1.5e-48 196.8 166 63.3
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 2.0e-48 196.4 185 62.2
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 2.6e-48 196.1 196 61.2
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 4.4e-48 195.3 136 73.5
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 5.7e-48 194.9 176 64.8
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 5.7e-48 194.9 203 58.1
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 7.5e-48 194.5 160 66.9
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 7.5e-48 194.5 163 68.1
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 7.5e-48 194.5 160 67.5
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 9.7e-48 194.1 195 60.0
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 1.7e-47 193.4 184 60.9
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 1.7e-47 193.4 215 59.5
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 1.7e-47 193.4 193 61.7
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 3.7e-47 192.2 159 67.3
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 6.3e-47 191.4 205 58.0
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 6.3e-47 191.4 210 56.7
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 8.3e-47 191.0 169 62.7
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 1.4e-46 190.3 167 67.1
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 1.8e-46 189.9 164 62.8
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 1.8e-46 189.9 190 60.0
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 2.4e-46 189.5 163 63.2
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 5.3e-46 188.3 192 60.9
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 5.9e-45 184.9 188 58.5
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 5.9e-45 184.9 197 58.9
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 7.7e-45 184.5 199 57.8
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 1.0e-44 184.1 184 59.2
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 1.0e-44 184.1 194 57.2
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 1.3e-44 183.7 115 79.1
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 5.0e-44 181.8 196 55.1
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 5.0e-44 181.8 194 57.7
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 8.5e-44 181.0 206 54.9
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 1.9e-43 179.9 192 56.2
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.9e-43 179.9 170 58.8
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 3.2e-43 179.1 141 68.1
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 4.2e-43 178.7 200 56.0
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 9.4e-43 177.6 193 54.4
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 9.4e-43 177.6 172 58.7
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 9.4e-43 177.6 207 52.2
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 1.2e-42 177.2 164 60.4
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 1.6e-42 176.8 207 56.5
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 3.6e-42 175.6 196 58.2
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 3.6e-42 175.6 196 58.2
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 4.7e-42 175.3 108 80.6
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 8.0e-42 174.5 198 56.1
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 1.4e-41 173.7 206 52.9
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 5.2e-41 171.8 209 53.1
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 6.8e-41 171.4 197 53.8
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 8.8e-41 171.0 150 59.3
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 1.5e-40 170.2 197 57.9
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 1.5e-40 170.2 197 57.9
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 1.5e-40 170.2 187 58.3
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 4.4e-40 168.7 196 55.1
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 5.7e-40 168.3 200 53.0
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 7.5e-40 167.9 203 53.2
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 8.3e-39 164.5 157 56.1
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 1.8e-38 163.3 152 57.9
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 2.4e-38 162.9 205 51.7
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 3.1e-38 162.5 122 68.0
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 4.1e-38 162.2 106 69.8
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 4.1e-38 162.2 115 70.4
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 2.7e-37 159.5 229 47.6
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 3.5e-37 159.1 106 75.5
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 1.0e-36 157.5 206 51.5
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 1.0e-33 147.5 88 80.7
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 3.0e-33 146.0 210 51.4
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 1.7e-31 140.2 156 57.1
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 5.0e-28 128.6 143 53.8
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 2.8e-26 122.9 114 51.8
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 2.3e-25 119.8 101 53.5
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 7.5e-24 114.8 114 49.1
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 1.4e-22 110.5 109 51.4
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 5.4e-22 108.6 145 49.0
Ca_23571_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 4.4e-16 89.0 145 42.1
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 5.8e-16 88.6 72 58.3
Gohir.D11G152300 Gossypium hirsutum HOM05D006993 ORTHO05D008336 4.9e-15 85.5 126 52.4
Haze_03547 Corylus avellana HOM05D006993 ORTHO05D008336 3.1e-09 66.2 109 48.6


User provided reference genes

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