Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020794 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 7.8e-230 800.0 387 100.0
CSS0001106 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 8.3e-115 417.9 311 71.4
CSS0008637 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.3e-112 410.6 311 70.4
CSS0031360 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 7.1e-106 388.3 311 67.2
Hma1.2p1_0018F.1_g012950 Hydrangea macrophylla HOM05D008081 ORTHO05D010223 1.2e-100 370.9 384 52.6
DCAR_009223 Daucus carota HOM05D008081 ORTHO05D010223 5.4e-98 362.1 395 51.9
Actinidia09389 Actinidia chinensis HOM05D008081 ORTHO05D010223 1.0e-96 357.8 350 56.0
Cc06_g09100 Coffea canephora HOM05D008081 ORTHO05D010223 3.4e-92 342.8 395 48.6
Nitab4.5_0000282g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 1.1e-87 327.8 386 45.6
Lsat_1_v5_gn_5_98420 Lactuca sativa HOM05D008081 ORTHO05D010223 4.3e-87 325.9 391 45.3
ECA234G2703 Erigeron canadensis HOM05D008081 ORTHO05D010223 1.6e-86 323.9 388 45.4
HanXRQChr10g0316871 Helianthus annuus HOM05D008081 ORTHO05D010223 2.1e-86 323.6 392 45.4
Nitab4.5_0003085g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 1.8e-85 320.5 381 46.2
Manes.14G127800 Manihot esculenta HOM05D008081 ORTHO05D010223 1.7e-83 313.9 380 44.7
QL02p086958 Quercus lobata HOM05D008081 ORTHO05D010223 6.4e-83 312.0 390 45.1
Nn2g11886 Nelumbo nucifera HOM05D008081 ORTHO05D010223 1.1e-82 311.2 392 43.6
Duzib168G0460 Durio zibethinus HOM05D008081 ORTHO05D010223 4.3e-79 299.3 388 43.0
COL.COLO4_34977 Corchorus olitorius HOM05D008081 ORTHO05D010223 3.7e-78 296.2 387 42.1
PGSC0003DMG400015624 Solanum tuberosum HOM05D008081 ORTHO05D010223 4.5e-76 289.3 388 42.8
Aqoxy7G01970 Aquilegia oxysepala HOM05D008081 ORTHO05D010223 7.6e-76 288.5 387 41.9
MBI04_g33811_MAGBIO Magnolia biondii HOM05D008081 ORTHO05D010223 1.7e-75 287.3 388 42.5
Psat1g025520 Pisum sativum HOM05D008081 ORTHO05D010223 8.4e-75 285.0 389 42.7
Thecc.09G118700 Theobroma cacao HOM05D008081 ORTHO05D010223 2.5e-74 283.5 401 39.9
CANSAT56G1336 Cannabis sativa HOM05D008081 ORTHO05D010223 4.2e-74 282.7 389 41.6
Glyma.06G213000 Glycine max HOM05D008081 ORTHO05D010223 5.5e-74 282.3 390 43.6
Medtr2g055250 Medicago truncatula HOM05D008081 ORTHO05D010223 7.1e-74 282.0 389 42.4
Sopen08g011800 Solanum pennellii HOM05D008081 ORTHO05D010223 9.3e-74 281.6 395 41.3
Oeu032197.1 Olea europaea HOM05D008081 ORTHO05D010223 1.6e-73 280.8 389 43.4
Solyc08g041700.1 Solanum lycopersicum HOM05D008081 ORTHO05D010223 2.1e-73 280.4 395 41.3
Eucgr.L02382 Eucalyptus grandis HOM05D008081 ORTHO05D010223 7.9e-73 278.5 381 43.3
Ca_02616_v3 Cicer arietinum L. HOM05D008081 ORTHO05D010223 2.3e-72 276.9 390 43.1
PGR142G1327 Punica granatum HOM05D008081 ORTHO05D010223 3.9e-72 276.2 389 41.6
PSO765G0202 Papaver somniferum HOM05D008081 ORTHO05D010223 6.7e-72 275.4 389 41.6
Glyma.04G150400 Glycine max HOM05D008081 ORTHO05D010223 2.5e-71 273.5 390 43.3
GSVIVG01015465001 Vitis vinifera HOM05D008081 ORTHO05D010223 2.5e-71 273.5 379 41.7
Gorai.010G066900 Gossypium raimondii HOM05D008081 ORTHO05D010223 3.7e-70 269.6 389 40.6
Atru.chr7.1264 Acer truncatum HOM05D008081 ORTHO05D010223 1.1e-69 268.1 402 40.5
TAR383G0366 Trochodendron aralioides HOM05D008081 ORTHO05D010223 1.1e-69 268.1 380 41.3
Gohir.A06G059000 Gossypium hirsutum HOM05D008081 ORTHO05D010223 1.8e-69 267.3 389 40.6
VMungo1309G1591 Vigna mungo HOM05D008081 ORTHO05D010223 3.1e-69 266.5 395 43.3
Gohir.D06G057200 Gossypium hirsutum HOM05D008081 ORTHO05D010223 5.3e-69 265.8 389 40.4
PSO349G0241 Papaver somniferum HOM05D008081 ORTHO05D010223 2.6e-68 263.5 392 40.8
Lalb_Chr01g0020971 Lupinus albus HOM05D008081 ORTHO05D010223 3.4e-68 263.1 391 39.9
Ciclev10008639m.g Citrus clementina HOM05D008081 ORTHO05D010223 7.6e-68 261.9 393 38.7
Lj1g0011101 Lotus japonicus HOM05D008081 ORTHO05D010223 2.9e-67 260.0 400 41.0
Cpa.g.sc75.87 Carica papaya HOM05D008081 ORTHO05D010223 4.9e-67 259.2 350 43.4
Phvul.009G199400 Phaseolus vulgaris HOM05D008081 ORTHO05D010223 8.4e-67 258.5 393 42.5
Potri.018G071900 Populus trichocarpa HOM05D008081 ORTHO05D010223 1.2e-65 254.6 399 38.8
TWI34G1060 Tripterygium wilfordii HOM05D008081 ORTHO05D010223 1.8e-64 250.8 393 40.2
Sabra18G0062600 Salix brachista HOM05D008081 ORTHO05D010223 5.7e-63 245.7 394 37.3
Dinv36582 Davidia involucrata HOM05D008081 ORTHO05D010223 4.8e-62 242.7 335 45.1
AT5G19970 Arabidopsis thaliana HOM05D008081 ORTHO05D010223 8.5e-59 231.9 389 36.2
Carub.0006s1834 Capsella rubella HOM05D008081 ORTHO05D010223 1.9e-58 230.7 386 36.5
Peaxi162Scf00292g00051 Petunia axillaris HOM05D008081 ORTHO05D010223 2.7e-57 226.9 291 43.6
Thhalv10013658m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 1.0e-56 224.9 388 36.3
Sp6g24410 Schrenkiella parvula HOM05D008081 ORTHO05D010223 9.7e-55 218.4 388 36.3
BolC2t06998H Brassica oleracea HOM05D008081 ORTHO05D010223 2.2e-54 217.2 388 35.8
BNapus_Darmor_BZH_scaffold_38p01920 Brassica napus HOM05D008081 ORTHO05D010223 3.7e-54 216.5 388 35.8
A02p05940 Brassica napus HOM05D008081 ORTHO05D010223 8.2e-54 215.3 388 35.6
BraA02t05546Z Brassica rapa HOM05D008081 ORTHO05D010223 8.2e-54 215.3 388 35.6
Eucgr.C01103 Eucalyptus grandis HOM05D008081 ORTHO05D010223 3.8e-51 206.5 310 41.3
AL6G31500 Arabidopsis lyrata HOM05D008081 ORTHO05D010223 3.2e-50 203.4 360 35.3
CARHR192880 Cardamine hirsuta HOM05D008081 ORTHO05D010223 6.7e-48 195.7 361 33.8
Zm00001eb158500 Zea mays HOM05D008081 ORTHO05D010223 6.7e-48 195.7 399 31.8
Thhalv10013905m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 3.3e-47 193.4 357 34.7
THA.LOC104815107 Tarenaya hassleriana HOM05D008081 ORTHO05D010223 7.7e-44 182.2 383 32.6
Os01g0647000 Oryza sativa ssp. japonica HOM05D008081 ORTHO05D010223 5.0e-43 179.5 405 30.9
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 2.1e-41 174.1 343 32.4
TPR.G30892 Trifolium pratense HOM05D008081 ORTHO05D010223 9.1e-37 158.7 160 47.5
ATR0083G076 Amborella trichopoda HOM05D008081 ORTHO05D010223 2.6e-36 157.1 372 28.2
BcaB05g22890 Brassica carinata HOM05D008081 ORTHO05D010223 1.6e-20 104.8 166 36.1
BcaC03g13723 Brassica carinata HOM05D008081 ORTHO05D010223 1.1e-18 98.6 113 43.4


User provided reference genes

Program Settings