Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020773 Camellia sinensis var. sinensis HOM05D006366 ORTHO05D008467 1.8e-65 252.3 118 100.0
CSS0012855 Camellia sinensis var. sinensis HOM05D006366 ORTHO05D008467 9.2e-65 250.0 118 99.2
CSS0005885 Camellia sinensis var. sinensis HOM05D006366 ORTHO05D008467 8.0e-61 236.9 114 96.5
CSS0048073 Camellia sinensis var. sinensis HOM05D006366 ORTHO05D008467 8.0e-61 236.9 114 96.5
Rhsim11G0024700 Rhododendron simsii HOM05D006366 ORTHO05D008467 3.2e-57 224.9 114 88.6
Actinidia01262 Actinidia chinensis HOM05D006366 ORTHO05D008467 2.3e-55 218.8 114 87.7
vmacro00060 Vaccinium macrocarpon HOM05D006366 ORTHO05D008467 3.0e-55 218.4 114 86.0
Actinidia32776 Actinidia chinensis HOM05D006366 ORTHO05D008467 5.6e-54 214.2 114 86.8
Peaxi162Scf00351g00618 Petunia axillaris HOM05D006366 ORTHO05D008467 1.2e-53 213.0 114 83.3
Nitab4.5_0006724g0060 Nicotiana tabacum HOM05D001798 ORTHO05D008467 2.8e-53 211.8 115 81.7
Solyc07g044830.3 Solanum lycopersicum HOM05D006366 ORTHO05D008467 2.8e-53 211.8 114 83.3
PGSC0003DMG400000936 Solanum tuberosum HOM05D006366 ORTHO05D008467 2.8e-53 211.8 114 83.3
Nitab4.5_0006644g0050 Nicotiana tabacum HOM05D006366 ORTHO05D008467 1.4e-52 209.5 114 81.6
Sopen07g023380 Solanum pennellii HOM05D006366 ORTHO05D008467 1.8e-52 209.1 114 82.5
CAN.G946.5 Capsicum annuum HOM05D006366 ORTHO05D008467 2.3e-52 208.8 114 83.3
Dinv26512 Davidia involucrata HOM05D006366 ORTHO05D008467 1.5e-51 206.1 114 81.6
Thecc.01G164300 Theobroma cacao HOM05D006366 ORTHO05D008467 2.6e-51 205.3 115 78.3
Gohir.A12G087400 Gossypium hirsutum HOM05D006366 ORTHO05D008467 5.8e-51 204.1 115 77.4
Gorai.008G096000 Gossypium raimondii HOM05D006366 ORTHO05D008467 5.8e-51 204.1 115 77.4
MSTRG.24998 Avicennia marina HOM05D006366 ORTHO05D008467 1.3e-50 203.0 113 79.6
Cc05_g00620 Coffea canephora HOM05D006366 ORTHO05D008467 1.3e-50 203.0 114 78.1
Prupe.3G191400 Prunus persica HOM05D006366 ORTHO05D008467 1.3e-50 203.0 114 79.8
Gohir.D12G085600 Gossypium hirsutum HOM05D006366 ORTHO05D008467 2.2e-50 202.2 115 76.5
Duzib147G0458 Durio zibethinus HOM05D006366 ORTHO05D008467 2.9e-50 201.8 115 76.5
Glyma.13G004000 Glycine max HOM05D006366 ORTHO05D008467 6.4e-50 200.7 115 76.5
Migut.C00287 Erythranthe guttata HOM05D006366 ORTHO05D008467 1.1e-49 199.9 114 78.1
GSVIVG01012987001 Vitis vinifera HOM05D006366 ORTHO05D008467 1.4e-49 199.5 114 78.1
Glyma.20G065200 Glycine max HOM05D006366 ORTHO05D008467 1.9e-49 199.1 115 75.7
SalBow7G2372 Salvia bowleyana HOM05D006366 ORTHO05D008467 1.9e-49 199.1 114 78.1
Sc06g0005840 Simmondsia chinensis HOM05D006366 ORTHO05D008467 2.4e-49 198.7 118 72.9
DCAR_009833 Daucus carota HOM05D006366 ORTHO05D008467 3.2e-49 198.4 113 77.9
MBI07_g10945_MAGBIO Magnolia biondii HOM05D006366 ORTHO05D008467 3.2e-49 198.4 111 77.5
arahy.Tifrunner.gnm1.ann1.Q8HZUY Arachis hypogaea HOM05D006366 ORTHO05D008467 4.1e-49 198.0 115 73.9
arahy.Tifrunner.gnm1.ann1.ZW16GX Arachis hypogaea HOM05D006366 ORTHO05D008467 4.1e-49 198.0 115 73.9
CANSAT64G1607 Cannabis sativa HOM05D006366 ORTHO05D008467 4.1e-49 198.0 114 76.3
Cfa017853 Carpinus fangiana HOM05D006366 ORTHO05D008467 4.1e-49 198.0 114 77.2
Hma1.2p1_0451F.1_g155730 Hydrangea macrophylla HOM05D006366 ORTHO05D008467 4.1e-49 198.0 114 75.4
Atru.chr8.945 Acer truncatum HOM05D006366 ORTHO05D008467 5.4e-49 197.6 115 74.8
HanXRQChr17g0540961 Helianthus annuus HOM05D006366 ORTHO05D008467 5.4e-49 197.6 113 77.0
MD09G1135300 Malus domestica HOM05D006366 ORTHO05D008467 5.4e-49 197.6 114 74.6
COL.COLO4_29916 Corchorus olitorius HOM05D006366 ORTHO05D008467 7.0e-49 197.2 115 73.9
TWI60G0958 Tripterygium wilfordii HOM05D006366 ORTHO05D008467 9.2e-49 196.8 114 75.4
Lsat_1_v5_gn_3_36241 Lactuca sativa HOM05D006366 ORTHO05D008467 1.2e-48 196.4 109 78.9
Sabra16G0023400 Salix brachista HOM05D006366 ORTHO05D008467 1.6e-48 196.1 114 74.6
Sabra16G0028900 Salix brachista HOM05D006366 ORTHO05D008467 1.6e-48 196.1 114 74.6
Phvul.006G002200 Phaseolus vulgaris HOM05D006366 ORTHO05D008467 2.0e-48 195.7 115 74.8
Ca_16310_v3 Cicer arietinum L. HOM05D006366 ORTHO05D008467 4.6e-48 194.5 115 74.8
Ciclev10009311m.g Citrus clementina HOM05D006366 ORTHO05D008467 4.6e-48 194.5 114 73.7
Eucgr.K01331 Eucalyptus grandis HOM05D006366 ORTHO05D008467 4.6e-48 194.5 114 73.7
Psat5g107960 Pisum sativum HOM05D006366 ORTHO05D008467 7.8e-48 193.7 112 76.8
Potri.016G022700 Populus trichocarpa HOM05D006366 ORTHO05D008467 7.8e-48 193.7 114 74.6
Sed0019883 Sechium edule HOM05D006366 ORTHO05D008467 7.8e-48 193.7 114 72.8
Manes.09G000100 Manihot esculenta HOM05D006366 ORTHO05D008467 1.0e-47 193.4 115 73.0
TAR624G0611 Trochodendron aralioides HOM05D006366 ORTHO05D008467 1.3e-47 193.0 111 76.6
Nn3g18048 Nelumbo nucifera HOM05D006366 ORTHO05D008467 3.0e-47 191.8 114 73.7
RcHm_v2.0_Chr2g0154731 Rosa chinensis HOM05D006366 ORTHO05D008467 3.0e-47 191.8 114 73.7
Lj6g0003976 Lotus japonicus HOM05D006366 ORTHO05D008467 3.9e-47 191.4 113 72.6
CiPaw.15G093200 Carya illinoinensis HOM05D006366 ORTHO05D008467 6.6e-47 190.7 114 74.6
CsaV3_4G032210 Cucumis sativus L. HOM05D006366 ORTHO05D008467 6.6e-47 190.7 113 73.5
Hund24327 Selenicereus undatus HOM05D006366 ORTHO05D008467 8.6e-47 190.3 114 71.9
PGR004G2515 Punica granatum HOM05D006366 ORTHO05D008467 1.1e-46 189.9 114 71.9
Aqoxy1G01337 Aquilegia oxysepala HOM05D006366 ORTHO05D008467 1.5e-46 189.5 114 71.1
MELO3C026394.2 Cucumis melo HOM05D006366 ORTHO05D008467 1.9e-46 189.1 113 72.6
Medtr3g081290 Medicago truncatula HOM05D006366 ORTHO05D008467 2.5e-46 188.7 113 73.5
FAN05G0502 Fragaria x ananassa HOM05D006366 ORTHO05D008467 3.3e-46 188.3 111 74.8
ClCG11G016700 Citrullus lanatus HOM05D006366 ORTHO05D008467 4.3e-46 188.0 115 70.4
Lalb_Chr22g0360801 Lupinus albus HOM05D006366 ORTHO05D008467 4.3e-46 188.0 112 71.4
SGA_v2.0_scaffold26G11309 Striga asiatica HOM05D006366 ORTHO05D008467 4.3e-46 188.0 114 71.1
THA.LOC104803019 Tarenaya hassleriana HOM05D006366 ORTHO05D008467 4.3e-46 188.0 114 71.9
Cpa.g.sc8.298 Carica papaya HOM05D006366 ORTHO05D008467 9.5e-46 186.8 114 71.9
FAN09G0641 Fragaria x ananassa HOM05D006366 ORTHO05D008467 1.2e-45 186.4 111 73.9
HPP92_021470 Vanilla planifolia HOM05D006366 ORTHO05D008467 1.2e-45 186.4 114 71.1
Carub.0007s2713 Capsella rubella HOM05D006366 ORTHO05D008467 1.6e-45 186.0 113 74.3
PSO675G0146 Papaver somniferum HOM05D006366 ORTHO05D008467 2.8e-45 185.3 111 72.1
PSO541G2638 Papaver somniferum HOM05D006366 ORTHO05D008467 3.6e-45 184.9 111 71.2
AL7G40860 Arabidopsis lyrata HOM05D006366 ORTHO05D008467 4.7e-45 184.5 113 72.6
AUR62015180 Chenopodium quinoa HOM05D006366 ORTHO05D008467 4.7e-45 184.5 114 70.2
EL10Ac9g22887 Beta vulgaris HOM05D006366 ORTHO05D008467 6.2e-45 184.1 114 70.2
Aa31LG9G2360 Aethionema arabicum HOM05D006366 ORTHO05D008467 1.1e-44 183.3 113 71.7
AT4G14965 Arabidopsis thaliana HOM05D006366 ORTHO05D008467 2.3e-44 182.2 113 71.7
CARHR221600 Cardamine hirsuta HOM05D006366 ORTHO05D008467 2.3e-44 182.2 113 70.8
AUR62017635 Chenopodium quinoa HOM05D006366 ORTHO05D008467 2.3e-44 182.2 114 69.3
ATR0737G147 Amborella trichopoda HOM05D006366 ORTHO05D008467 4.0e-44 181.4 110 70.9
Thhalv10026107m.g Eutrema salsugineum HOM05D006366 ORTHO05D008467 5.2e-44 181.0 113 69.9
Sp7g13140 Schrenkiella parvula HOM05D006366 ORTHO05D008467 1.5e-43 179.5 113 71.7
A05p16880 Brassica napus HOM05D006366 ORTHO05D008467 5.8e-43 177.6 113 69.9
BraA05t20592Z Brassica rapa HOM05D006366 ORTHO05D008467 5.8e-43 177.6 113 69.9
Zm00001eb400650 Zea mays HOM05D006366 ORTHO05D008467 5.8e-43 177.6 113 64.6
VMungo0540G1919 Vigna mungo HOM05D006366 ORTHO05D008467 9.8e-43 176.8 100 78.0
Os03g0205500 Oryza sativa ssp. japonica HOM05D006366 ORTHO05D008467 1.3e-42 176.4 113 63.7
BcaB02g07847 Brassica carinata HOM05D006366 ORTHO05D008467 1.7e-42 176.0 113 69.0
FAN14G5422 Fragaria x ananassa HOM05D006366 ORTHO05D008467 1.7e-42 176.0 104 74.0
C06p16670 Brassica napus HOM05D006366 ORTHO05D008467 2.2e-42 175.6 113 69.0
BolC6t36868H Brassica oleracea HOM05D006366 ORTHO05D008467 2.2e-42 175.6 113 69.0
ECA246G1127 Erigeron canadensis HOM05D006366 ORTHO05D008467 8.3e-42 173.7 96 80.2
Peaxi162Scf01158g00018 Petunia axillaris HOM05D006366 ORTHO05D008467 8.3e-42 173.7 99 77.8
SEGI_23922 Sequoiadendron giganteum HOM05D006366 ORTHO05D008467 1.9e-41 172.6 114 67.5
Lj3A1010G53 Lonicera japonica HOM05D006366 ORTHO05D008467 4.1e-41 171.4 128 64.8
Oeu011642.1 Olea europaea HOM05D006366 ORTHO05D008467 2.7e-40 168.7 93 80.6
BcaC08g44258 Brassica carinata HOM05D006366 ORTHO05D008467 4.6e-40 167.9 111 67.6
TPR.G31172 Trifolium pratense HOM05D006366 ORTHO05D008467 2.5e-38 162.2 91 79.1
SHI11338 Sapria himalayana HOM05D006366 ORTHO05D008467 1.7e-34 149.4 107 60.7
SMO367G0820 Selaginella moellendorffii HOM05D006366 ORTHO05D008467 1.2e-32 143.3 112 52.7
unitig_0.g1057 Utricularia gibba HOM05D001088 ORTHO05D002099 1.9e-30 136.0 79 73.4
Potri.006G023801 Populus trichocarpa HOM05D006366 ORTHO05D008467 2.6e-27 125.6 81 64.2
Mapoly0115s0059 Marchantia polymorpha HOM05D006366 ORTHO05D008467 3.5e-24 115.2 113 44.2
Pp3c21_2980 Physcomitrium patens HOM05D006366 ORTHO05D008467 8.1e-21 104.0 112 40.2
Pp3c18_20590 Physcomitrium patens HOM05D006366 ORTHO05D008467 1.1e-20 103.6 112 41.1
FvH4_6g40100 Fragaria vesca HOM05D006366 ORTHO05D008467 1.4e-20 103.2 59 81.4
CBR_g19221 Chara braunii HOM05D006366 ORTHO05D008467 6.9e-20 100.9 114 42.1
Haze_18340 Corylus avellana HOM05D006366 ORTHO05D008467 3.4e-19 98.6 60 66.7
PRCOL_00003273 Prasinoderma coloniale HOM05D006366 ORTHO05D008467 5.1e-15 84.7 114 38.6
MCO15G416 Micromonas commoda HOM05D006366 ORTHO05D008467 1.6e-13 79.7 113 38.9
Aqoxy2G02028 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.6e-08 63.2 54 55.6


User provided reference genes

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