Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 4.4e-198 694.5 367 100.0
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 1.0e-146 523.9 401 74.3
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 3.0e-138 495.7 426 68.1
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 1.1e-129 467.2 399 66.4
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 2.5e-129 466.1 355 72.4
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 1.3e-128 463.8 399 68.2
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 8.1e-128 461.1 404 66.1
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 6.9e-127 458.0 407 63.4
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 1.5e-126 456.8 395 65.1
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 3.4e-126 455.7 405 63.2
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 1.3e-125 453.8 414 65.0
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 2.4e-124 449.5 400 63.5
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 9.3e-124 447.6 406 62.8
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 6.0e-123 444.9 422 60.9
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 2.3e-122 443.0 398 62.1
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 5.1e-122 441.8 398 63.8
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 6.7e-122 441.4 398 62.8
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 1.9e-121 439.9 402 62.4
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 1.9e-121 439.9 407 60.2
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 1.9e-121 439.9 351 68.9
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 9.6e-121 437.6 405 61.7
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 1.6e-120 436.8 408 61.0
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 3.7e-120 435.6 408 60.0
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 3.7e-120 435.6 406 62.6
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 4.8e-120 435.3 396 63.1
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 4.8e-120 435.3 401 59.9
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 6.2e-120 434.9 408 59.6
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 6.2e-120 434.9 398 63.3
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 1.1e-119 434.1 405 60.2
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 1.1e-119 434.1 407 61.4
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 1.4e-119 433.7 408 61.3
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 2.4e-119 433.0 414 59.7
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 2.4e-119 433.0 408 60.8
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 1.2e-118 430.6 400 64.0
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 2.0e-118 429.9 411 59.6
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 5.8e-118 428.3 393 61.1
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 7.6e-118 427.9 408 60.5
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 7.6e-118 427.9 402 61.7
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 1.0e-117 427.6 409 61.6
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 2.9e-117 426.0 348 66.1
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 2.9e-117 426.0 404 62.1
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 3.8e-117 425.6 393 61.3
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 4.9e-117 425.2 422 60.7
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 4.9e-117 425.2 408 60.3
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 1.1e-116 424.1 404 61.6
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 7.1e-116 421.4 417 57.8
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 9.3e-116 421.0 402 62.4
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 9.3e-116 421.0 399 59.9
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 3.5e-115 419.1 425 57.2
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 6.0e-115 418.3 401 58.9
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 7.9e-115 417.9 423 57.7
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 7.9e-115 417.9 423 57.9
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 1.3e-114 417.2 408 59.3
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 1.3e-114 417.2 394 60.9
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 5.1e-114 415.2 398 59.5
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 6.7e-114 414.8 423 57.4
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 1.5e-113 413.7 418 57.4
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 9.6e-113 411.0 423 57.4
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 1.3e-112 410.6 401 59.9
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 2.8e-112 409.5 352 65.3
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 4.8e-112 408.7 399 60.2
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 1.1e-111 407.5 520 50.0
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 1.2e-110 404.1 415 58.1
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 1.2e-110 404.1 335 66.6
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 2.6e-110 402.9 399 58.9
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 3.8e-109 399.1 399 59.9
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 6.5e-109 398.3 398 60.1
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 9.3e-108 394.4 335 64.2
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 3.6e-107 392.5 415 57.1
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 6.1e-107 391.7 400 59.5
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 6.1e-107 391.7 344 64.5
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 7.9e-107 391.3 417 56.4
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 7.9e-107 391.3 424 55.7
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 1.0e-106 391.0 397 56.7
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 1.8e-106 390.2 331 65.0
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 2.5e-105 386.3 421 55.1
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.5e-105 386.3 426 54.5
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 5.7e-105 385.2 425 55.5
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.2e-104 383.3 426 54.2
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 4.8e-104 382.1 426 54.2
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 1.8e-103 380.2 421 54.2
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 4.1e-103 379.0 424 54.2
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 5.3e-103 378.6 414 54.6
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 9.1e-103 377.9 424 54.0
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 1.5e-102 377.1 423 54.4
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 1.5e-102 377.1 439 53.8
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 7.7e-102 374.8 420 52.9
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 2.5e-100 369.8 395 53.7
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 4.6e-99 365.5 416 52.9
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 4.6e-99 365.5 401 53.9
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 3.9e-98 362.5 430 52.3
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 1.8e-95 353.6 388 57.0
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 1.8e-95 353.6 397 53.7
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 1.1e-92 344.4 418 50.2
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 1.4e-92 344.0 418 50.2
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 2.1e-91 340.1 411 50.9
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 2.7e-91 339.7 319 61.1
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 6.1e-91 338.6 319 59.2
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 1.9e-84 317.0 367 52.3
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 2.3e-82 310.1 327 55.7
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 5.7e-81 305.4 336 50.0
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 6.3e-80 302.0 312 57.1
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 7.2e-76 288.5 270 60.7
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 8.0e-75 285.0 311 54.3
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 1.7e-69 267.3 385 42.9
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.7e-69 267.3 294 54.1
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 9.5e-68 261.5 266 54.9
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 4.5e-62 242.7 413 39.7
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 4.5e-62 242.7 331 44.4
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 1.5e-52 211.1 211 56.4
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 2.0e-49 200.7 387 35.7
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 6.4e-48 195.7 124 79.8
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 9.5e-44 181.8 149 64.4
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 8.9e-42 175.3 194 52.6
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 7.8e-22 109.0 88 62.5
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 3.9e-21 106.7 330 28.8
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 1.8e-18 97.8 86 60.5
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 2.4e-18 97.4 474 24.9
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 8.4e-16 89.0 65 80.0
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 2.4e-10 70.9 66 53.0
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 6.9e-10 69.3 46 69.6
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 1.2e-09 68.6 46 67.4
SHI23188 Sapria himalayana HOM05D006391 ORTHO05D007767 2.2e-08 64.3 120 40.0
PRCOL_00004538 Prasinoderma coloniale HOM05D006391 ORTHO05D007767 4.9e-08 63.2 318 23.0
BolC3t13192H Brassica oleracea HOM05D006391 ORTHO05D007767 5.5e-07 59.7 158 31.6


User provided reference genes

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