Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020746 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 4.1e-84 314.7 160 100.0
CSS0029795 Camellia sinensis var. sinensis HOM05D000566 ORTHO05D008456 3.5e-83 311.6 160 98.8
Rhsim13G0191700 Rhododendron simsii HOM05D000566 ORTHO05D000686 5.8e-30 134.8 134 60.4
vmacro03936 Vaccinium macrocarpon HOM05D000566 ORTHO05D008456 9.9e-30 134.0 131 61.8
Hma1.2p1_0437F.1_g152980 Hydrangea macrophylla HOM05D000566 ORTHO05D008456 3.5e-27 125.6 131 58.8
Dinv04627 Davidia involucrata HOM05D000566 ORTHO05D008456 1.0e-26 124.0 129 62.8
Nitab4.5_0000206g0050 Nicotiana tabacum HOM05D000566 ORTHO05D008456 3.5e-19 99.0 132 50.8
Oeu039926.1 Olea europaea HOM05D000566 ORTHO05D008456 1.0e-18 97.4 59 83.1
Actinidia16807 Actinidia chinensis HOM05D000566 ORTHO05D008456 1.3e-18 97.1 58 79.3
TWI38G1860 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 1.3e-18 97.1 100 59.0
unitig_699.g19342 Utricularia gibba HOM05D000566 ORTHO05D008456 3.9e-18 95.5 95 60.0
Cpa.g.sc7.62 Carica papaya HOM05D000566 ORTHO05D008456 8.7e-18 94.4 118 54.2
Haze_06259 Corylus avellana HOM05D000566 ORTHO05D008456 8.7e-18 94.4 95 60.0
THA.LOC104814247 Tarenaya hassleriana HOM05D000566 ORTHO05D008456 8.7e-18 94.4 96 59.4
COL.COLO4_31322 Corchorus olitorius HOM05D000566 ORTHO05D000686 1.5e-17 93.6 136 50.0
Migut.M01050 Erythranthe guttata HOM05D000566 ORTHO05D008456 1.5e-17 93.6 60 80.0
HanXRQChr07g0186931 Helianthus annuus HOM05D000566 ORTHO05D008456 1.5e-17 93.6 102 59.8
Lsat_1_v5_gn_4_50020 Lactuca sativa HOM05D000566 ORTHO05D008456 1.5e-17 93.6 126 54.0
Atru.chr10.1700 Acer truncatum HOM05D000566 ORTHO05D008456 1.9e-17 93.2 123 52.0
DCAR_004017 Daucus carota HOM05D000566 ORTHO05D008456 1.9e-17 93.2 62 79.0
TAR626G0526 Trochodendron aralioides HOM05D000566 ORTHO05D008456 2.5e-17 92.8 122 53.3
Peaxi162Scf01070g00226 Petunia axillaris HOM05D000566 ORTHO05D008456 4.3e-17 92.0 80 65.0
Peaxi162Scf01479g00012 Petunia axillaris HOM05D000566 ORTHO05D008456 4.3e-17 92.0 80 65.0
CiPaw.09G068300 Carya illinoinensis HOM05D000566 ORTHO05D008456 5.6e-17 91.7 94 56.4
MSTRG.7396 Avicennia marina HOM05D000566 ORTHO05D008456 7.4e-17 91.3 98 58.2
ECA234G0195 Erigeron canadensis HOM05D000566 ORTHO05D000686 1.3e-16 90.5 59 79.7
Hund23960 Selenicereus undatus HOM05D000566 ORTHO05D008456 1.3e-16 90.5 123 52.0
SalBow8G0706 Salvia bowleyana HOM05D000566 ORTHO05D008456 1.6e-16 90.1 98 58.2
SGA_v2.0_scaffold1G00030 Striga asiatica HOM05D000566 ORTHO05D008456 1.6e-16 90.1 109 55.0
Eucgr.E02712 Eucalyptus grandis HOM05D000566 ORTHO05D008456 3.7e-16 89.0 101 55.4
PGSC0003DMG401022314 Solanum tuberosum HOM05D000566 ORTHO05D008456 3.7e-16 89.0 46 91.3
Solyc07g064690.1 Solanum lycopersicum HOM05D000566 ORTHO05D008456 4.8e-16 88.6 46 91.3
Thecc.06G173200 Theobroma cacao HOM05D000566 ORTHO05D008456 4.8e-16 88.6 92 54.3
AT1G29040 Arabidopsis thaliana HOM05D000566 ORTHO05D008456 6.2e-16 88.2 79 59.5
Cfa000591 Carpinus fangiana HOM05D000566 ORTHO05D008456 6.2e-16 88.2 95 56.8
Potri.011G064600 Populus trichocarpa HOM05D000566 ORTHO05D008456 8.2e-16 87.8 89 56.2
QL05p046292 Quercus lobata HOM05D000566 ORTHO05D008456 1.1e-15 87.4 132 47.7
Sabra11G0046400 Salix brachista HOM05D000566 ORTHO05D008456 1.8e-15 86.7 58 70.7
CAN.G337.143 Capsicum annuum HOM05D000566 ORTHO05D008456 2.4e-15 86.3 46 87.0
Lj4g0018718 Lotus japonicus HOM05D000566 ORTHO05D008456 4.0e-15 85.5 88 58.0
PSO675G8854 Papaver somniferum HOM05D000566 ORTHO05D008456 4.0e-15 85.5 61 70.5
Prupe.4G059300 Prunus persica HOM05D000566 ORTHO05D008456 4.0e-15 85.5 120 49.2
Ciclev10016472m.g Citrus clementina HOM05D000566 ORTHO05D008456 5.3e-15 85.1 64 70.3
Lj2A297T108 Lonicera japonica HOM05D000566 ORTHO05D008456 5.3e-15 85.1 97 55.7
Sp1g24970 Schrenkiella parvula HOM05D000566 ORTHO05D008456 5.3e-15 85.1 69 62.3
Duzib192G0190 Durio zibethinus HOM05D000566 ORTHO05D008456 6.9e-15 84.7 128 50.0
MD10G1282600 Malus domestica HOM05D000566 ORTHO05D008456 9.0e-15 84.3 120 47.5
Manes.16G037200 Manihot esculenta HOM05D000566 ORTHO05D008456 9.0e-15 84.3 130 48.5
PSO541G3700 Papaver somniferum HOM05D000566 ORTHO05D008456 9.0e-15 84.3 85 54.1
BcaC06g35392 Brassica carinata HOM05D000566 ORTHO05D008456 1.2e-14 84.0 99 52.5
C07p16640 Brassica napus HOM05D000566 ORTHO05D008456 1.2e-14 84.0 99 52.5
Lalb_Chr05g0218771 Lupinus albus HOM05D000566 ORTHO05D008456 1.2e-14 84.0 62 69.4
Sc05g0007190 Simmondsia chinensis HOM05D000566 ORTHO05D008456 1.2e-14 84.0 93 59.1
BcaB03g13911 Brassica carinata HOM05D000566 ORTHO05D008456 1.5e-14 83.6 69 62.3
Psat7g118880 Pisum sativum HOM05D000566 ORTHO05D008456 1.5e-14 83.6 73 63.0
Carub.0001s2723 Capsella rubella HOM05D000566 ORTHO05D008456 2.0e-14 83.2 51 76.5
CARHR028250 Cardamine hirsuta HOM05D000566 ORTHO05D008456 2.0e-14 83.2 74 60.8
MELO3C007220.2 Cucumis melo HOM05D000566 ORTHO05D008456 2.0e-14 83.2 106 52.8
AL1G42750 Arabidopsis lyrata HOM05D000566 ORTHO05D008456 2.6e-14 82.8 56 73.2
BolC7t42164H Brassica oleracea HOM05D000566 ORTHO05D008456 2.6e-14 82.8 69 62.3
Thhalv10009067m.g Eutrema salsugineum HOM05D000566 ORTHO05D008456 2.6e-14 82.8 56 73.2
Lalb_Chr16g0384251 Lupinus albus HOM05D000566 ORTHO05D008456 2.6e-14 82.8 109 49.5
PGR042G3563 Punica granatum HOM05D000566 ORTHO05D008456 3.4e-14 82.4 114 50.9
HPP92_024140 Vanilla planifolia HOM05D000566 ORTHO05D008456 3.4e-14 82.4 57 73.7
A07p11000 Brassica napus HOM05D000566 ORTHO05D008456 5.8e-14 81.6 97 48.5
BraA07t28892Z Brassica rapa HOM05D000566 ORTHO05D008456 5.8e-14 81.6 97 48.5
Gohir.A06G134006 Gossypium hirsutum HOM05D000566 ORTHO05D008456 5.8e-14 81.6 113 48.7
Medtr4g087740 Medicago truncatula HOM05D000566 ORTHO05D008456 7.6e-14 81.3 59 69.5
GSVIVG01021190001 Vitis vinifera HOM05D000566 ORTHO05D008456 7.6e-14 81.3 39 100.0
EL10Ac8g20507 Beta vulgaris HOM05D000566 ORTHO05D008456 1.0e-13 80.9 135 46.7
CDE02G2902 Ceratophyllum demersum HOM05D000566 ORTHO05D008456 1.0e-13 80.9 44 86.4
MBI06_g25985_MAGBIO Magnolia biondii HOM05D000566 ORTHO05D008456 1.0e-13 80.9 71 60.6
Nn1g04373 Nelumbo nucifera HOM05D000566 ORTHO05D008456 1.0e-13 80.9 91 53.8
Aa31LG6G11510 Aethionema arabicum HOM05D000566 ORTHO05D008456 1.3e-13 80.5 98 52.0
Gohir.D06G136400 Gossypium hirsutum HOM05D000566 ORTHO05D008456 1.3e-13 80.5 113 53.1
Gorai.010G158600 Gossypium raimondii HOM05D000566 ORTHO05D008456 1.3e-13 80.5 113 53.1
Aqoxy1G03201 Aquilegia oxysepala HOM05D000566 ORTHO05D008456 1.7e-13 80.1 42 88.1
CANSAT35G0195 Cannabis sativa HOM05D000566 ORTHO05D008456 2.2e-13 79.7 78 56.4
ClCG01G023650 Citrullus lanatus HOM05D000566 ORTHO05D008456 2.2e-13 79.7 92 54.3
Cc02_g14640 Coffea canephora HOM05D000566 ORTHO05D008456 2.2e-13 79.7 39 94.9
Phvul.003G058300 Phaseolus vulgaris HOM05D000566 ORTHO05D008456 2.2e-13 79.7 44 84.1
VMungo0251G1655 Vigna mungo HOM05D000566 ORTHO05D008456 2.2e-13 79.7 44 84.1
Ca_26053_v3 Cicer arietinum L. HOM05D000566 ORTHO05D008456 2.9e-13 79.3 58 70.7
FAN21G0306 Fragaria x ananassa HOM05D000566 ORTHO05D008456 2.9e-13 79.3 98 48.0
SEGI_18524 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 2.9e-13 79.3 41 90.2
Sopen07g032890 Solanum pennellii HOM05D000566 ORTHO05D008456 2.9e-13 79.3 41 90.2
AUR62036584 Chenopodium quinoa HOM05D000566 ORTHO05D008456 3.8e-13 79.0 57 70.2
Glyma.13G171000 Glycine max HOM05D000566 ORTHO05D008456 3.8e-13 79.0 61 70.5
SEGI_06418 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 3.8e-13 79.0 57 70.2
FAN25G1525 Fragaria x ananassa HOM05D000566 ORTHO05D000686 4.9e-13 78.6 77 55.8
TPR.G16280 Trifolium pratense HOM05D000566 ORTHO05D008456 4.9e-13 78.6 83 56.6
Ah.09g233690 Amaranthus hybridus HOM05D000566 ORTHO05D008456 6.5e-13 78.2 83 57.8
FAN11G2813 Fragaria x ananassa HOM05D000566 ORTHO05D008456 6.5e-13 78.2 77 54.5
Medtr4g087750 Medicago truncatula HOM05D000566 ORTHO05D008456 8.4e-13 77.8 56 71.4
CsaV3_6G050800 Cucumis sativus L. HOM05D000566 ORTHO05D008456 1.1e-12 77.4 106 51.9
FvH4_3g07991 Fragaria vesca HOM05D000566 ORTHO05D008456 1.4e-12 77.0 129 42.6
Sed0006380 Sechium edule HOM05D000566 ORTHO05D008456 1.4e-12 77.0 132 47.7
FAN16G3553 Fragaria x ananassa HOM05D000566 ORTHO05D008456 1.9e-12 76.6 129 42.6
Glyma.13G170900 Glycine max HOM05D000566 ORTHO05D008456 3.2e-12 75.9 39 89.7
Zm00001eb162000 Zea mays HOM05D000566 ORTHO05D008456 3.2e-12 75.9 122 46.7
Pp3c23_18520 Physcomitrium patens HOM05D000566 ORTHO05D008456 4.2e-12 75.5 42 83.3
RcHm_v2.0_Chr5g0010321 Rosa chinensis HOM05D000566 ORTHO05D008456 5.5e-12 75.1 121 45.5
Pp3c24_14610 Physcomitrium patens HOM05D000566 ORTHO05D008456 2.1e-11 73.2 41 82.9
VMungo0251G1536 Vigna mungo HOM05D000566 ORTHO05D008456 2.7e-11 72.8 39 82.1
Os01g0613300 Oryza sativa ssp. japonica HOM05D000566 ORTHO05D008456 4.6e-11 72.0 135 42.2
Glyma.04G136400 Glycine max HOM05D000566 ORTHO05D008456 6.1e-11 71.6 39 84.6
SEGI_28108 Sequoiadendron giganteum HOM05D000566 ORTHO05D008456 3.0e-10 69.3 48 68.8
TWI38G1453 Tripterygium wilfordii HOM05D000566 ORTHO05D008456 8.7e-10 67.8 95 44.2
arahy.Tifrunner.gnm1.ann1.441UHN Arachis hypogaea HOM05D000566 ORTHO05D008456 1.5e-09 67.0 38 78.9
arahy.Tifrunner.gnm1.ann1.AZL87G Arachis hypogaea HOM05D000566 ORTHO05D008456 1.5e-09 67.0 38 78.9
ATR0602G168 Amborella trichopoda HOM05D000566 ORTHO05D008456 2.4e-07 59.7 72 51.4
MCO02G300 Micromonas commoda HOM05D000566 ORTHO05D008456 3.1e-07 59.3 40 65.0


User provided reference genes

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