Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020739 Camellia sinensis var. sinensis HOM05D004359 ORTHO05D005052 2.6e-311 1071.2 546 100.0
CSS0027981 Camellia sinensis var. sinensis HOM05D004359 ORTHO05D005052 9.4e-298 1026.2 541 97.0
CSS0047775 Camellia sinensis var. sinensis HOM05D004359 ORTHO05D005052 2.4e-269 931.8 566 86.7
CSS0018932 Camellia sinensis var. sinensis HOM05D004359 ORTHO05D005052 8.9e-256 886.7 572 83.6
Dinv44576 Davidia involucrata HOM05D004359 ORTHO05D005052 3.2e-237 825.1 564 77.3
CSS0047348 Camellia sinensis var. sinensis HOM05D004359 ORTHO05D005052 6.0e-236 820.8 564 76.1
Hma1.2p1_0549F.1_g177000 Hydrangea macrophylla HOM05D004359 ORTHO05D005052 1.7e-235 819.3 564 75.4
vmacro08371 Vaccinium macrocarpon HOM05D004359 ORTHO05D005052 1.4e-232 809.7 569 75.2
Actinidia04510 Actinidia chinensis HOM05D004359 ORTHO05D005052 9.0e-232 807.0 599 72.8
Rhsim04G0197200 Rhododendron simsii HOM05D004359 ORTHO05D005052 2.6e-231 805.4 566 75.1
GSVIVG01018042001 Vitis vinifera HOM05D004359 ORTHO05D005052 2.1e-225 785.8 565 72.7
Lj3C728G3 Lonicera japonica HOM05D004359 ORTHO05D005052 6.5e-222 774.2 569 71.5
Cc03_g04290 Coffea canephora HOM05D004359 ORTHO05D005052 2.7e-220 768.8 564 72.0
Actinidia40118 Actinidia chinensis HOM05D004359 ORTHO05D005052 1.3e-217 760.0 566 72.1
TAR362G1241 Trochodendron aralioides HOM05D004359 ORTHO05D005052 1.3e-217 760.0 565 70.8
HanXRQChr10g0294741 Helianthus annuus HOM05D004359 ORTHO05D005052 1.5e-215 753.1 570 68.9
Lsat_1_v5_gn_5_104320 Lactuca sativa HOM05D004359 ORTHO05D005052 3.8e-214 748.4 564 69.5
Atru.chr4.2362 Acer truncatum HOM05D004359 ORTHO05D005052 6.5e-214 747.7 575 69.2
Nn6g34169 Nelumbo nucifera HOM05D004359 ORTHO05D005052 8.5e-214 747.3 564 69.9
Ciclev10004430m.g Citrus clementina HOM05D004359 ORTHO05D005052 1.9e-213 746.1 564 70.4
Oeu064246.1 Olea europaea HOM05D004359 ORTHO05D005052 2.5e-213 745.7 561 69.2
ECA234G1583 Erigeron canadensis HOM05D004359 ORTHO05D005052 2.1e-212 742.7 570 68.6
MD13G1199900 Malus domestica HOM05D004359 ORTHO05D005052 2.7e-212 742.3 563 69.4
QL06p000928 Quercus lobata HOM05D004359 ORTHO05D005052 1.8e-211 739.6 565 68.7
Manes.03G173100 Manihot esculenta HOM05D004359 ORTHO05D005052 1.1e-210 736.9 570 68.2
MD16G1199900 Malus domestica HOM05D004359 ORTHO05D005052 1.9e-210 736.1 563 68.6
MSTRG.4062 Avicennia marina HOM05D004359 ORTHO05D005052 8.2e-209 730.7 560 67.9
CiPaw.01G195300 Carya illinoinensis HOM05D004359 ORTHO05D005052 8.2e-209 730.7 564 68.4
Thecc.04G238800 Theobroma cacao HOM05D004359 ORTHO05D005052 1.1e-208 730.3 571 68.5
Potri.010G081800 Populus trichocarpa HOM05D004359 ORTHO05D005052 1.4e-208 729.9 564 68.4
Sabra10G0061100 Salix brachista HOM05D004359 ORTHO05D005052 6.9e-208 727.6 569 68.0
Oeu064245.1 Olea europaea HOM05D004359 ORTHO05D005052 2.0e-207 726.1 602 64.5
HanXRQChr16g0513791 Helianthus annuus HOM05D004359 ORTHO05D005052 4.5e-207 724.9 564 67.2
FvH4_4g01230 Fragaria vesca HOM05D004359 ORTHO05D005052 3.8e-206 721.8 560 67.9
RcHm_v2.0_Chr4g0387781 Rosa chinensis HOM05D004359 ORTHO05D005052 3.8e-206 721.8 562 67.3
CiPaw.02G120800 Carya illinoinensis HOM05D004359 ORTHO05D005052 8.5e-206 720.7 560 68.9
COL.COLO4_21565 Corchorus olitorius HOM05D004359 ORTHO05D005052 8.5e-206 720.7 528 71.8
Prupe.1G021300 Prunus persica HOM05D004359 ORTHO05D005052 1.4e-205 719.9 563 67.3
FAN22G1739 Fragaria x ananassa HOM05D004359 ORTHO05D005052 1.9e-205 719.5 560 67.3
CAN.G1437.8 Capsicum annuum HOM05D004359 ORTHO05D005052 4.2e-205 718.4 564 67.7
Cpa.g.sc44.123 Carica papaya HOM05D004359 ORTHO05D005052 7.2e-205 717.6 561 67.6
Cfa008449 Carpinus fangiana HOM05D004359 ORTHO05D005052 7.2e-205 717.6 564 68.1
Gohir.A09G219100 Gossypium hirsutum HOM05D004359 ORTHO05D005052 9.4e-205 717.2 562 67.8
FAN17G0057 Fragaria x ananassa HOM05D004359 ORTHO05D005052 1.6e-204 716.5 562 67.4
PGR004G1328 Punica granatum HOM05D004359 ORTHO05D005052 3.6e-204 715.3 567 66.5
FAN12G0664 Fragaria x ananassa HOM05D004359 ORTHO05D005052 4.6e-204 714.9 563 67.3
Aqoxy5G00400 Aquilegia oxysepala HOM05D004359 ORTHO05D005052 7.9e-204 714.1 566 66.3
DCAR_027243 Daucus carota HOM05D004359 ORTHO05D005052 1.0e-203 713.8 563 67.1
TWI73G1293 Tripterygium wilfordii HOM05D004359 ORTHO05D005052 1.0e-203 713.8 565 68.3
SGA_v2.0_scaffold191G40427 Striga asiatica HOM05D004359 ORTHO05D005052 1.5e-202 709.9 527 70.2
PGSC0003DMG400006446 Solanum tuberosum HOM05D004359 ORTHO05D005052 2.0e-202 709.5 564 67.2
Solyc09g082680.3 Solanum lycopersicum HOM05D004359 ORTHO05D005052 3.7e-201 705.3 564 67.0
Eucgr.H03411 Eucalyptus grandis HOM05D004359 ORTHO05D005052 8.2e-201 704.1 563 66.6
Sopen09g031540 Solanum pennellii HOM05D004359 ORTHO05D005052 1.4e-200 703.4 564 66.8
Duzib052G0975 Durio zibethinus HOM05D004359 ORTHO05D005052 2.6e-199 699.1 562 67.3
Glyma.10G243900 Glycine max HOM05D004359 ORTHO05D005052 3.4e-199 698.7 560 64.3
Gorai.006G242500 Gossypium raimondii HOM05D004359 ORTHO05D005052 5.9e-199 698.0 590 64.4
Gohir.D09G221300 Gossypium hirsutum HOM05D004359 ORTHO05D005052 1.0e-198 697.2 524 70.2
SalBow2G3046 Salvia bowleyana HOM05D004359 ORTHO05D005052 1.3e-198 696.8 561 66.7
VMungo0720G0936 Vigna mungo HOM05D004359 ORTHO05D005052 2.9e-198 695.7 561 64.7
Lalb_Chr06g0160731 Lupinus albus HOM05D004359 ORTHO05D005052 1.1e-197 693.7 566 64.5
ATR0665G111 Amborella trichopoda HOM05D004359 ORTHO05D005052 2.5e-197 692.6 562 64.9
SalBow3G0915 Salvia bowleyana HOM05D004359 ORTHO05D005052 7.2e-197 691.0 563 65.5
Haze_11233 Corylus avellana HOM05D004359 ORTHO05D005052 1.2e-196 690.3 513 70.6
Migut.N00211 Erythranthe guttata HOM05D004359 ORTHO05D005052 1.2e-196 690.3 559 66.9
DCAR_002367 Daucus carota HOM05D004359 ORTHO05D005052 1.6e-196 689.9 565 63.9
Ca_10850_v3 Cicer arietinum L. HOM05D004359 ORTHO05D005052 2.1e-196 689.5 562 63.7
arahy.Tifrunner.gnm1.ann1.4267PD Arachis hypogaea HOM05D004359 ORTHO05D005052 3.6e-196 688.7 562 64.8
Sc19g0003940 Simmondsia chinensis HOM05D004359 ORTHO05D005052 3.6e-196 688.7 528 68.8
Phvul.007G061900 Phaseolus vulgaris HOM05D004359 ORTHO05D005052 7.9e-196 687.6 561 64.3
PSO170G6248 Papaver somniferum HOM05D004359 ORTHO05D005052 1.4e-195 686.8 568 65.1
Glyma.20G150500 Glycine max HOM05D004359 ORTHO05D005052 1.8e-195 686.4 561 64.0
MSTRG.21878 Avicennia marina HOM05D004359 ORTHO05D005052 3.9e-195 685.3 564 66.0
Migut.G00384 Erythranthe guttata HOM05D004359 ORTHO05D005052 3.9e-195 685.3 567 64.6
TPR.G26109 Trifolium pratense HOM05D004359 ORTHO05D005052 5.2e-195 684.9 562 63.0
PSO210G2230 Papaver somniferum HOM05D004359 ORTHO05D005052 6.7e-195 684.5 565 65.5
Psat6g204080 Pisum sativum HOM05D004359 ORTHO05D005052 8.8e-195 684.1 562 63.0
Medtr1g102840 Medicago truncatula HOM05D004359 ORTHO05D005052 1.1e-194 683.7 562 63.3
ClCG05G004860 Citrullus lanatus HOM05D004359 ORTHO05D005052 3.3e-194 682.2 565 65.1
CANSAT78G1027 Cannabis sativa HOM05D004359 ORTHO05D005052 7.4e-194 681.0 572 65.2
MELO3C006500.2 Cucumis melo HOM05D004359 ORTHO05D005052 1.3e-193 680.2 565 64.8
THA.LOC104826064 Tarenaya hassleriana HOM05D004359 ORTHO05D005052 1.3e-193 680.2 565 63.5
DCAR_030686 Daucus carota HOM05D004359 ORTHO05D005052 1.7e-193 679.9 569 63.3
arahy.Tifrunner.gnm1.ann1.GV821P Arachis hypogaea HOM05D004359 ORTHO05D005052 6.3e-193 677.9 576 63.0
EL10Ac3g06499 Beta vulgaris HOM05D004359 ORTHO05D005052 1.4e-192 676.8 552 64.1
Lj5g0004472 Lotus japonicus HOM05D004359 ORTHO05D005052 9.1e-192 674.1 562 62.5
CsaV3_3G012900 Cucumis sativus L. HOM05D004359 ORTHO05D005052 1.6e-191 673.3 565 64.4
Sed0002276 Sechium edule HOM05D004359 ORTHO05D005052 2.2e-190 669.5 564 63.1
SGA_v2.0_scaffold79G25594 Striga asiatica HOM05D004359 ORTHO05D005052 8.5e-190 667.5 560 64.6
Glyma.10G003000 Glycine max HOM05D004359 ORTHO05D005052 3.2e-189 665.6 565 62.3
Aa31LG1G20640 Aethionema arabicum HOM05D004359 ORTHO05D005052 2.7e-188 662.5 559 62.4
CDE07G0702 Ceratophyllum demersum HOM05D004359 ORTHO05D005052 4.7e-188 661.8 569 62.9
A08p37060 Brassica napus HOM05D004359 ORTHO05D005052 1.5e-186 656.8 562 62.3
BcaC05g24464 Brassica carinata HOM05D004359 ORTHO05D005052 3.3e-186 655.6 568 62.5
BolC5t29020H Brassica oleracea HOM05D004359 ORTHO05D005052 7.5e-186 654.4 579 61.5
BcaC05g24462 Brassica carinata HOM05D004359 ORTHO05D005052 9.7e-186 654.1 579 61.5
Lalb_Chr03g0037471 Lupinus albus HOM05D004359 ORTHO05D005052 9.7e-186 654.1 565 61.6
Sp1g03020 Schrenkiella parvula HOM05D004359 ORTHO05D005052 2.8e-185 652.5 567 61.6
C05p02410 Brassica napus HOM05D004359 ORTHO05D005052 3.7e-185 652.1 579 61.5
Glyma.15G201600 Glycine max HOM05D004359 ORTHO05D005052 2.4e-184 649.4 567 61.2
Os01g0773100 Oryza sativa ssp. japonica HOM05D004359 ORTHO05D005052 1.2e-183 647.1 566 61.7
Dinv14046 Davidia involucrata HOM05D004359 ORTHO05D005052 2.7e-183 646.0 470 74.0
Thhalv10006925m.g Eutrema salsugineum HOM05D004359 ORTHO05D005052 8.5e-182 641.0 573 61.1
Carub.0001s0339 Capsella rubella HOM05D004359 ORTHO05D005052 1.5e-181 640.2 568 60.7
Phvul.007G278300 Phaseolus vulgaris HOM05D004359 ORTHO05D005052 1.9e-181 639.8 564 59.9
Lj6A646G73 Lonicera japonica HOM05D004359 ORTHO05D005052 6.1e-180 634.8 567 62.6
Peaxi162Scf00316g00517 Petunia axillaris HOM05D004359 ORTHO05D005052 6.1e-180 634.8 564 61.7
Nitab4.5_0002541g0010 Nicotiana tabacum HOM05D004359 ORTHO05D005052 1.0e-179 634.0 563 62.0
BolC8t46894H Brassica oleracea HOM05D004359 ORTHO05D005052 1.4e-179 633.6 575 59.7
AL1G13800 Arabidopsis lyrata HOM05D004359 ORTHO05D005052 8.8e-179 630.9 566 62.2
AUR62038653 Chenopodium quinoa HOM05D004359 ORTHO05D005052 1.5e-178 630.2 563 60.0
SEGI_41464 Sequoiadendron giganteum HOM05D004359 ORTHO05D005052 2.2e-177 626.3 527 63.6
AUR62032000 Chenopodium quinoa HOM05D004359 ORTHO05D005052 3.5e-175 619.0 566 59.2
HPP92_015636 Vanilla planifolia HOM05D004359 ORTHO05D005052 1.3e-174 617.1 527 62.6
CARHR003530 Cardamine hirsuta HOM05D004359 ORTHO05D005052 1.7e-174 616.7 562 60.7
BcaC07g36931 Brassica carinata HOM05D004359 ORTHO05D005052 5.0e-174 615.1 557 59.8
C08p00930 Brassica napus HOM05D004359 ORTHO05D005052 3.2e-173 612.5 557 59.4
Nitab4.5_0000090g0250 Nicotiana tabacum HOM05D004359 ORTHO05D005052 4.2e-173 612.1 568 60.0
Zm00001eb151770 Zea mays HOM05D004359 ORTHO05D005052 4.4e-162 575.5 567 57.1
Duzib212G0656 Durio zibethinus HOM05D004359 ORTHO05D005052 3.0e-158 562.8 562 56.8
VMungo0720G0919 Vigna mungo HOM05D004359 ORTHO05D005052 1.9e-157 560.1 563 53.8
AT1G04200 Arabidopsis thaliana HOM05D004359 ORTHO05D005052 1.0e-155 554.3 481 64.4
Zm00001eb370110 Zea mays HOM05D004359 ORTHO05D005052 1.8e-155 553.5 506 59.9
A10p02630 Brassica napus HOM05D004359 ORTHO05D005052 3.4e-154 549.3 560 56.1
AagrBONN_evm.TU.Sc2ySwM_228.2874 Anthoceros agrestis HOM05D004359 ORTHO05D005052 2.4e-152 543.1 527 55.6
Ah.04g154140 Amaranthus hybridus HOM05D004359 ORTHO05D005052 3.6e-148 529.3 570 52.1
CDE04G1738 Ceratophyllum demersum HOM05D004359 ORTHO05D005052 2.1e-143 513.5 523 56.0
SMO340G0218 Selaginella moellendorffii HOM05D004359 ORTHO05D005052 3.1e-139 499.6 529 53.1
Mapoly0021s0008 Marchantia polymorpha HOM05D004359 ORTHO05D005052 8.7e-126 454.9 537 47.9
AUR62033626 Chenopodium quinoa HOM05D004359 ORTHO05D005052 1.1e-125 454.5 554 49.6
unitig_736.g22459 Utricularia gibba HOM05D004359 ORTHO05D005052 1.3e-121 441.0 381 62.2
SEGI_08230 Sequoiadendron giganteum HOM05D004359 ORTHO05D005052 1.3e-116 424.5 306 70.9
CSS0049416 Camellia sinensis var. sinensis HOM05D004359 ORTHO05D005052 3.4e-106 389.8 289 73.4
CSS0043956 Camellia sinensis var. sinensis HOM05D004359 ORTHO05D005052 4.9e-105 386.0 282 74.8
CBR_g41568 Chara braunii HOM05D004359 ORTHO05D005052 4.9e-105 386.0 688 38.4
Manes.15G033000 Manihot esculenta HOM05D004359 ORTHO05D005052 3.5e-103 379.8 461 50.3
unitig_899.g14876 Utricularia gibba HOM05D004359 ORTHO05D005052 1.3e-60 238.4 518 33.0
SHI00527 Sapria himalayana HOM05D004359 ORTHO05D005052 8.9e-46 189.1 213 50.7
Sabra08G0120100 Salix brachista HOM05D004359 ORTHO05D005052 1.6e-42 178.3 557 31.1
BcaC06g35467 Brassica carinata HOM05D004359 ORTHO05D005052 1.6e-39 168.3 189 52.4
SEGI_13286 Sequoiadendron giganteum HOM05D004359 ORTHO05D005052 8.0e-39 166.0 165 55.2
RcHm_v2.0_Chr4g0393601 Rosa chinensis HOM05D004359 ORTHO05D005052 7.5e-37 159.5 151 58.9
SHI00526 Sapria himalayana HOM05D004359 ORTHO05D005052 1.3e-36 158.7 148 58.8
FAN17G0101 Fragaria x ananassa HOM05D004359 ORTHO05D005052 4.9e-36 156.8 114 65.8
BolC2t09698H Brassica oleracea HOM05D004359 ORTHO05D005052 1.4e-35 155.2 188 49.5
TPR.G734 Trifolium pratense HOM05D004359 ORTHO05D005052 2.1e-31 141.4 179 44.1
SHI00525 Sapria himalayana HOM05D004359 ORTHO05D005052 4.7e-31 140.2 182 47.3
BcaC03g15924 Brassica carinata HOM05D004359 ORTHO05D005052 3.4e-29 134.0 166 50.6
Hma1.2p1_0549F.1_g177020 Hydrangea macrophylla HOM05D004359 ORTHO05D005052 5.4e-27 126.7 128 57.8
BolC5t32353H Brassica oleracea HOM05D004359 ORTHO05D005052 2.1e-26 124.8 121 55.4
Phvul.007G263800 Phaseolus vulgaris HOM05D004359 ORTHO05D050299 1.8e-22 111.7 317 31.2
Glyma.19G081300 Glycine max HOM05D004359 ORTHO05D005052 4.3e-16 90.5 82 54.9
Sed0019342 Sechium edule HOM05D004359 ORTHO05D050299 9.6e-16 89.4 58 74.1
RcHm_v2.0_Chr4g0393611 Rosa chinensis HOM05D004359 ORTHO05D005052 2.9e-12 77.8 88 50.0
COL.COLO4_15960 Corchorus olitorius HOM05D004359 ORTHO05D005052 1.4e-11 75.5 63 60.3
COL.COLO4_21093 Corchorus olitorius HOM05D004359 ORTHO05D005052 8.7e-09 66.2 37 83.8


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