Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020713 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 2.1e-73 278.9 135 100.0
CSS0046539 Camellia sinensis var. sinensis HOM05D006715 ORTHO05D008345 1.6e-44 183.0 144 70.8
vmacro20039 Vaccinium macrocarpon HOM05D006715 ORTHO05D008345 3.1e-24 115.5 148 52.0
Dinv41067 Davidia involucrata HOM05D006715 ORTHO05D008345 1.3e-22 110.2 142 48.6
Rhsim05G0181200 Rhododendron simsii HOM05D006715 ORTHO05D008345 6.4e-22 107.8 148 50.0
Lj7A376T34 Lonicera japonica HOM05D006715 ORTHO05D008345 1.1e-21 107.1 145 48.3
Actinidia17784 Actinidia chinensis HOM05D006715 ORTHO05D008345 1.6e-17 93.2 155 45.2
Aqoxy5G00857 Aquilegia oxysepala HOM05D006715 ORTHO05D008345 1.2e-15 87.0 134 46.3
TAR381G1273 Trochodendron aralioides HOM05D006715 ORTHO05D008345 1.5e-15 86.7 143 43.4
TWI34G0194 Tripterygium wilfordii HOM05D006715 ORTHO05D008345 2.2e-14 82.8 143 42.0
Nn5g28769 Nelumbo nucifera HOM05D006715 ORTHO05D008345 4.9e-14 81.6 142 39.4
GSVIVG01034549001 Vitis vinifera HOM05D006715 ORTHO05D008345 6.4e-14 81.3 140 42.1
Eucgr.F02698 Eucalyptus grandis HOM05D006715 ORTHO05D008345 2.4e-13 79.3 125 44.0
Gorai.010G134600 Gossypium raimondii HOM05D006715 ORTHO05D008345 2.4e-13 79.3 145 40.0
DCAR_010095 Daucus carota HOM05D006715 ORTHO05D008345 5.5e-13 78.2 117 44.4
Lsat_1_v5_gn_9_41180 Lactuca sativa HOM05D006715 ORTHO05D008345 1.2e-12 77.0 142 40.1
Lalb_Chr01g0009551 Lupinus albus HOM05D006715 ORTHO05D008345 1.2e-12 77.0 128 43.8
Gohir.A06G112504 Gossypium hirsutum HOM05D006715 ORTHO05D008345 1.6e-12 76.6 170 35.3
Gohir.D06G116900 Gossypium hirsutum HOM05D006715 ORTHO05D008345 1.6e-12 76.6 145 39.3
Cfa018312 Carpinus fangiana HOM05D006715 ORTHO05D008345 2.1e-12 76.3 146 40.4
CiPaw.16G011000 Carya illinoinensis HOM05D006715 ORTHO05D008345 2.7e-12 75.9 146 38.4
Oeu031098.1 Olea europaea HOM05D006715 ORTHO05D008345 3.5e-12 75.5 139 39.6
Sc02g0003950 Simmondsia chinensis HOM05D006715 ORTHO05D008345 1.3e-11 73.6 125 40.8
SGA_v2.0_scaffold25G11186 Striga asiatica HOM05D006715 ORTHO05D008345 1.3e-11 73.6 148 38.5
Migut.N03207 Erythranthe guttata HOM05D006715 ORTHO05D008345 1.8e-11 73.2 113 43.4
Lj2g0009741 Lotus japonicus HOM05D006715 ORTHO05D008345 1.8e-11 73.2 125 42.4
PGR042G1662 Punica granatum HOM05D006715 ORTHO05D008345 1.8e-11 73.2 147 38.1
Ciclev10000601m.g Citrus clementina HOM05D006715 ORTHO05D008345 2.3e-11 72.8 127 39.4
ECA232G1953 Erigeron canadensis HOM05D006715 ORTHO05D008345 2.3e-11 72.8 132 40.9
Duzib093G1010 Durio zibethinus HOM05D006715 ORTHO05D008345 3.0e-11 72.4 145 37.9
Manes.02G180601 Manihot esculenta HOM05D006715 ORTHO05D008345 3.0e-11 72.4 147 39.5
Hund26691 Selenicereus undatus HOM05D006715 ORTHO05D008345 3.0e-11 72.4 143 35.0
Nitab4.5_0001187g0100 Nicotiana tabacum HOM05D006715 ORTHO05D008345 6.7e-11 71.2 139 38.8
Potri.005G193500 Populus trichocarpa HOM05D006715 ORTHO05D008345 6.7e-11 71.2 123 39.8
CDE12G0089 Ceratophyllum demersum HOM05D006715 ORTHO05D008345 8.7e-11 70.9 137 38.0
RcHm_v2.0_Chr6g0275051 Rosa chinensis HOM05D006715 ORTHO05D008345 1.1e-10 70.5 140 39.3
COL.COLO4_29857 Corchorus olitorius HOM05D006715 ORTHO05D008345 1.5e-10 70.1 146 37.0
EL10Ac1g01568 Beta vulgaris HOM05D006715 ORTHO05D008345 1.9e-10 69.7 108 40.7
CANSAT25G3857 Cannabis sativa HOM05D006715 ORTHO05D008345 4.3e-10 68.6 158 37.3
RcHm_v2.0_Chr5g0050861 Rosa chinensis HOM05D006715 ORTHO05D008345 7.4e-10 67.8 140 39.3
Atru.chr13.2084 Acer truncatum HOM05D006715 ORTHO05D008345 1.6e-09 66.6 128 37.5
Cpa.g.sc1027.1 Carica papaya HOM05D006715 ORTHO05D008345 1.6e-09 66.6 151 37.7
HanXRQChr11g0320291 Helianthus annuus HOM05D006715 ORTHO05D008345 2.1e-09 66.2 139 38.8
FvH4_2g13430 Fragaria vesca HOM05D006715 ORTHO05D008345 2.8e-09 65.9 124 37.9
FAN24G1213 Fragaria x ananassa HOM05D006715 ORTHO05D008345 2.8e-09 65.9 124 37.9
MD05G1027900 Malus domestica HOM05D006715 ORTHO05D008345 2.8e-09 65.9 145 37.2
FAN27G2814 Fragaria x ananassa HOM05D006715 ORTHO05D008345 3.7e-09 65.5 120 40.0
SalBow6G6609 Salvia bowleyana HOM05D006715 ORTHO05D008345 3.7e-09 65.5 121 38.8
arahy.Tifrunner.gnm1.ann1.6MC3QX Arachis hypogaea HOM05D006715 ORTHO05D008345 6.2e-09 64.7 143 36.4
CAN.G1215.10 Capsicum annuum HOM05D006715 ORTHO05D008345 8.2e-09 64.3 149 36.9
Psat1g102000 Pisum sativum HOM05D006715 ORTHO05D008345 8.2e-09 64.3 148 37.2
Thecc.08G154500 Theobroma cacao HOM05D006715 ORTHO05D008345 8.2e-09 64.3 126 38.9
Sed0009104 Sechium edule HOM05D006715 ORTHO05D008345 1.4e-08 63.5 129 36.4
ClCG08G002210 Citrullus lanatus HOM05D006715 ORTHO05D008345 1.8e-08 63.2 126 37.3
MELO3C025024.2 Cucumis melo HOM05D006715 ORTHO05D008345 1.8e-08 63.2 127 35.4
CsaV3_6G002600 Cucumis sativus L. HOM05D006715 ORTHO05D008345 1.8e-08 63.2 125 38.4
Glyma.16G166267 Glycine max HOM05D006715 ORTHO05D008345 1.8e-08 63.2 124 39.5
MSTRG.24217 Avicennia marina HOM05D006715 ORTHO05D008345 2.4e-08 62.8 159 31.4
Sopen04g027550 Solanum pennellii HOM05D006715 ORTHO05D008345 3.1e-08 62.4 149 36.2
Peaxi162Scf00599g00121 Petunia axillaris HOM05D006715 ORTHO05D008345 4.0e-08 62.0 168 34.5
A09p00880 Brassica napus HOM05D006715 ORTHO05D008345 5.3e-08 61.6 123 37.4
BraA09t35760Z Brassica rapa HOM05D006715 ORTHO05D008345 5.3e-08 61.6 123 37.4
VMungo0464G1764 Vigna mungo HOM05D006715 ORTHO05D008345 5.3e-08 61.6 132 37.9
MBI17_g41095_MAGBIO Magnolia biondii HOM05D006715 ORTHO05D008345 6.9e-08 61.2 163 35.0
THA.LOC104804670 Tarenaya hassleriana HOM05D006715 ORTHO05D008345 6.9e-08 61.2 147 34.7
BcaC04g24108 Brassica carinata HOM05D006715 ORTHO05D008345 9.0e-08 60.8 118 39.0
C09p00980 Brassica napus HOM05D006715 ORTHO05D008345 9.0e-08 60.8 118 39.0
unitig_21.g20147 Utricularia gibba HOM05D006715 ORTHO05D008345 1.2e-07 60.5 147 32.0
BolC9t53031H Brassica oleracea HOM05D006715 ORTHO05D008345 2.0e-07 59.7 118 38.1
Phvul.004G094200 Phaseolus vulgaris HOM05D006715 ORTHO05D008345 2.0e-07 59.7 128 36.7
Ca_26954_v3 Cicer arietinum L. HOM05D006715 ORTHO05D008345 2.6e-07 59.3 82 48.8
Medtr2g045070 Medicago truncatula HOM05D006715 ORTHO05D008345 2.6e-07 59.3 147 35.4
PSO675G4790 Papaver somniferum HOM05D006715 ORTHO05D008345 2.6e-07 59.3 144 37.5
TPR.G23114 Trifolium pratense HOM05D006715 ORTHO05D008345 5.8e-07 58.2 123 38.2
Cc10_g14930 Coffea canephora HOM05D006715 ORTHO05D008345 7.6e-07 57.8 124 38.7
Zm00001eb083170 Zea mays HOM05D006715 ORTHO05D008345 1.7e-06 56.6 123 30.9
CARHR035370 Cardamine hirsuta HOM05D006715 ORTHO05D008345 6.5e-06 54.7 114 36.0
Sp1g32410 Schrenkiella parvula HOM05D006715 ORTHO05D008345 6.5e-06 54.7 123 35.8
arahy.Tifrunner.gnm1.ann1.SG7PGU Arachis hypogaea HOM05D006715 ORTHO05D008345 8.4e-06 54.3 162 31.5
AUR62026687 Chenopodium quinoa HOM05D006715 ORTHO05D008345 8.4e-06 54.3 108 34.3


User provided reference genes

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