Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020709 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 2.0e-136 489.2 263 100.0
CSS0028152 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 8.3e-74 281.2 265 58.1
CSS0023034 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 3.1e-65 252.7 264 56.1
CSS0028650 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 5.6e-54 215.3 258 49.6
CSS0031901 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 1.8e-44 183.7 172 58.1
CSS0000863 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 1.1e-38 164.5 166 54.2
CSS0017908 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 5.1e-31 139.0 172 48.3
CSS0009355 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 5.6e-30 135.6 236 37.7
CSS0028511 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D000001 1.6e-29 134.0 93 73.1
CSS0040722 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D110166 6.2e-29 132.1 213 46.0
CSS0020839 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 1.8e-28 130.6 156 49.4
CSS0004988 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.4e-25 120.2 229 36.2
CSS0008375 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 7.8e-24 115.2 247 37.2
CSS0030045 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 7.8e-24 115.2 247 37.2
CSS0028520 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 5.1e-23 112.5 115 52.2
CSS0041521 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D017724 5.1e-23 112.5 187 38.5
CSS0043805 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.6e-23 112.1 164 38.4
CSS0006020 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.5e-22 110.2 186 38.7
CSS0009795 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.2e-19 101.3 277 30.0
CSS0024820 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 2.0e-19 100.5 277 29.6
CSS0007783 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.1e-17 94.7 277 29.2
Rhsim04G0123900 Rhododendron simsii HOM05D000182 ORTHO05D000112 4.2e-17 92.8 129 43.4
Atru.chr8.482 Acer truncatum HOM05D000002 ORTHO05D000001 1.8e-15 87.4 253 30.4
RhsimUnG0237200 Rhododendron simsii HOM05D000002 ORTHO05D013260 1.9e-14 84.0 120 40.8
CSS0030269 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D004772 1.3e-13 81.3 80 51.2
Rhsim01G0085300 Rhododendron simsii HOM05D000002 ORTHO05D000047 2.1e-13 80.5 88 50.0
Rhsim02G0184000 Rhododendron simsii HOM05D010463 ORTHO05D017724 3.1e-12 76.6 131 42.0
CSS0010648 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D110099 2.9e-10 70.1 178 33.1
Sed0011426 Sechium edule HOM05D000002 ORTHO05D000001 6.4e-10 68.9 127 33.1
CSS0014506 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.2e-09 66.6 113 39.8
CSS0017443 Camellia sinensis var. sinensis HOM05D010463 ORTHO05D013260 4.2e-09 66.2 96 41.7
TWI77G0837 Tripterygium wilfordii HOM05D000002 ORTHO05D013260 5.5e-09 65.9 83 44.6
MD11G1138200 Malus domestica HOM05D000002 ORTHO05D000001 9.3e-09 65.1 189 28.6
RcHm_v2.0_Chr2g0101201 Rosa chinensis HOM05D000002 ORTHO05D000001 1.2e-08 64.7 128 33.6
Sopen12g001410 Solanum pennellii HOM05D000002 ORTHO05D000001 1.6e-08 64.3 183 27.9
TWI77G0936 Tripterygium wilfordii HOM05D010463 ORTHO05D013260 1.6e-08 64.3 83 43.4
Sopen01g031330 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-08 63.9 181 27.6
Sopen05g030290 Solanum pennellii HOM05D000002 ORTHO05D000001 2.1e-08 63.9 183 27.9
ECA240G2129 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-08 63.5 124 30.6
Sopen09g005960 Solanum pennellii HOM05D000002 ORTHO05D000001 4.6e-08 62.8 157 28.7
Sopen10g025530 Solanum pennellii HOM05D000002 ORTHO05D000001 6.0e-08 62.4 123 33.3
Sopen06g011710 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 60.8 160 26.9
Sopen07g006000 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 60.8 158 26.6
Sopen08g007840 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 60.8 158 26.6
Sopen04g022670 Solanum pennellii HOM05D000002 ORTHO05D000001 2.3e-07 60.5 160 27.5
Sopen07g022320 Solanum pennellii HOM05D000309 ORTHO05D000271 2.3e-07 60.5 158 26.6
Sopen01g046000 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-07 60.1 160 27.5
Sopen01g046010 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-07 60.1 160 27.5
Sopen09g027000 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-07 60.1 160 27.5
HanXRQChr14g0461781 Helianthus annuus HOM05D000002 ORTHO05D000001 3.9e-07 59.7 125 32.0
MD05G1287700 Malus domestica HOM05D000446 ORTHO05D000001 3.9e-07 59.7 123 30.9
Oeu043920.1 Olea europaea HOM05D000002 ORTHO05D000001 5.1e-07 59.3 125 35.2
CSS0002432 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.7e-07 58.9 128 28.9
Manes.02G216010 Manihot esculenta HOM05D000002 ORTHO05D000001 1.1e-06 58.2 142 28.9
Sopen01g005510 Solanum pennellii HOM05D000002 ORTHO05D000001 1.1e-06 58.2 154 27.9
TWI36G0427 Tripterygium wilfordii HOM05D000002 ORTHO05D000001 1.1e-06 58.2 260 25.0
ECA248G1956 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.5e-06 57.8 121 29.8
MD14G1005300 Malus domestica HOM05D000002 ORTHO05D000001 1.9e-06 57.4 181 27.1
Sopen07g024660 Solanum pennellii HOM05D000002 ORTHO05D000001 1.9e-06 57.4 149 28.9
Sopen00g009510 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-06 57.0 149 28.9
MD10G1307000 Malus domestica HOM05D000002 ORTHO05D000001 3.3e-06 56.6 117 30.8
Sopen10g006830 Solanum pennellii HOM05D000002 ORTHO05D000001 5.6e-06 55.8 127 28.3
MD05G1047900 Malus domestica HOM05D000002 ORTHO05D000001 9.6e-06 55.1 115 32.2
Sopen06g031040 Solanum pennellii HOM05D000002 ORTHO05D000001 9.6e-06 55.1 158 27.2
VMungo0464G1194 Vigna mungo HOM05D000349 ORTHO05D001782 9.6e-06 55.1 184 26.6


User provided reference genes

Program Settings