Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020656 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 3.9e-60 235.3 126 100.0
CSS0018723 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 7.2e-46 188.0 140 77.9
CSS0009451 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 2.7e-45 186.0 140 76.4
Rhsim03G0013500 Rhododendron simsii HOM05D003506 ORTHO05D004063 3.6e-29 132.5 144 59.0
Rhsim03G0013200 Rhododendron simsii HOM05D003506 ORTHO05D004063 4.7e-29 132.1 144 59.0
Actinidia26982 Actinidia chinensis HOM05D003506 ORTHO05D004063 2.6e-27 126.3 145 55.2
Rhsim03G0013700 Rhododendron simsii HOM05D003506 ORTHO05D004063 4.4e-27 125.6 144 57.6
Rhsim03G0012900 Rhododendron simsii HOM05D003506 ORTHO05D004063 2.2e-26 123.2 144 56.9
Rhsim03G0054300 Rhododendron simsii HOM05D003506 ORTHO05D004063 1.1e-25 120.9 121 57.0
Actinidia11819 Actinidia chinensis HOM05D003506 ORTHO05D004063 1.6e-24 117.1 115 53.9
CSS0045089 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 2.0e-24 116.7 61 91.8
CSS0044487 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 1.1e-22 110.9 141 43.3
Cc08_g04830 Coffea canephora HOM05D003506 ORTHO05D004063 9.8e-19 97.8 119 47.9
Cc10_g11570 Coffea canephora HOM05D003506 ORTHO05D004063 1.3e-18 97.4 119 47.1
Cc00_g33500 Coffea canephora HOM05D003506 ORTHO05D004063 1.7e-18 97.1 124 43.5
CSS0021977 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 1.4e-17 94.0 131 42.7
Cc00_g22760 Coffea canephora HOM05D003506 ORTHO05D004063 1.8e-17 93.6 114 49.1
Hma1.2p1_2475F.1_g322790 Hydrangea macrophylla HOM05D003506 ORTHO05D004063 4.6e-16 89.0 143 47.6
Lj1A1215T59 Lonicera japonica HOM05D003506 ORTHO05D004063 5.9e-16 88.6 117 41.0
Cc05_g09100 Coffea canephora HOM05D003506 ORTHO05D004063 3.0e-15 86.3 119 44.5
Atru.chr2.1012 Acer truncatum HOM05D003506 ORTHO05D004063 8.6e-15 84.7 140 38.6
Lj2C372T7 Lonicera japonica HOM05D003506 ORTHO05D004063 1.9e-14 83.6 119 42.9
CSS0001701 Camellia sinensis var. sinensis HOM05D003506 ORTHO05D004063 5.6e-14 82.0 114 44.7
RhsimUnG0207500 Rhododendron simsii HOM05D003506 ORTHO05D004063 9.5e-14 81.3 118 46.6
CAN.G641.75 Capsicum annuum HOM05D003506 ORTHO05D004063 3.6e-13 79.3 113 39.8
CAN.G641.64 Capsicum annuum HOM05D003506 ORTHO05D004063 6.2e-13 78.6 113 38.9
Cpa.g.c37786 Carica papaya HOM05D003506 ORTHO05D004063 6.2e-13 78.6 131 39.7
Cpa.g.sc727.3 Carica papaya HOM05D003506 ORTHO05D004063 6.2e-13 78.6 132 40.9
Prupe.7G078000 Prunus persica HOM05D003506 ORTHO05D004063 1.4e-12 77.4 126 41.3
Prupe.7G078200 Prunus persica HOM05D003506 ORTHO05D004063 1.4e-12 77.4 126 41.3
TWI60G1006 Tripterygium wilfordii HOM05D003506 ORTHO05D004063 2.3e-12 76.6 140 36.4
Cpa.g.sc27.151 Carica papaya HOM05D003506 ORTHO05D004063 3.1e-12 76.3 131 38.9
FvH4_6g22120 Fragaria vesca HOM05D003506 ORTHO05D004063 5.2e-12 75.5 116 40.5
FAN14G0755 Fragaria x ananassa HOM05D003506 ORTHO05D004063 5.2e-12 75.5 116 40.5
PGR042G2042 Punica granatum HOM05D003506 ORTHO05D004063 8.9e-12 74.7 139 37.4
Aqoxy1G04135 Aquilegia oxysepala HOM05D003506 ORTHO05D004063 1.2e-11 74.3 135 39.3
Cpa.g.sc47.17 Carica papaya HOM05D003506 ORTHO05D004063 1.5e-11 73.9 129 36.4
Aqoxy1G04209 Aquilegia oxysepala HOM05D003506 ORTHO05D004063 2.0e-11 73.6 144 38.9
Cpa.g.sc27.143 Carica papaya HOM05D003506 ORTHO05D004063 2.0e-11 73.6 118 41.5
Cpa.g.sc27.148 Carica papaya HOM05D003506 ORTHO05D004063 2.0e-11 73.6 118 39.8
Cpa.g.sc27.145 Carica papaya HOM05D003506 ORTHO05D004063 2.6e-11 73.2 131 38.9
Dinv40460 Davidia involucrata HOM05D003506 ORTHO05D004063 2.6e-11 73.2 127 41.7
DCAR_009112 Daucus carota HOM05D003506 ORTHO05D004063 4.4e-11 72.4 113 37.2
Lsat_1_v5_gn_1_124100 Lactuca sativa HOM05D003506 ORTHO05D004063 4.4e-11 72.4 104 41.3
Aqoxy4G00434 Aquilegia oxysepala HOM05D003506 ORTHO05D004063 1.3e-10 70.9 135 40.0
Cpa.g.sc27.154 Carica papaya HOM05D003506 ORTHO05D004063 1.3e-10 70.9 118 40.7
Haze_19427 Corylus avellana HOM05D003506 ORTHO05D004063 1.7e-10 70.5 102 46.1
MD14G1055300 Malus domestica HOM05D003506 ORTHO05D004063 1.7e-10 70.5 95 41.1
CANSAT21G2366 Cannabis sativa HOM05D003506 ORTHO05D004063 3.7e-10 69.3 132 33.3
Cfa001536 Carpinus fangiana HOM05D003506 ORTHO05D004063 3.7e-10 69.3 103 42.7
Haze_19428 Corylus avellana HOM05D003506 ORTHO05D004063 3.7e-10 69.3 116 42.2
Aqoxy4G00435 Aquilegia oxysepala HOM05D003506 ORTHO05D004063 4.9e-10 68.9 135 38.5
Cpa.g.c48019 Carica papaya HOM05D003506 ORTHO05D004063 6.4e-10 68.6 118 38.1
MBI18_g46344_MAGBIO Magnolia biondii HOM05D008432 ORTHO05D010288 6.4e-10 68.6 117 37.6
Ciclev10033967m.g Citrus clementina HOM05D003506 ORTHO05D004063 1.1e-09 67.8 116 36.2
MBI18_g07919_MAGBIO Magnolia biondii HOM05D008432 ORTHO05D010288 1.1e-09 67.8 117 37.6
QL12p009920 Quercus lobata HOM05D003506 ORTHO05D004063 1.1e-09 67.8 113 36.3
Cc08_g04930 Coffea canephora HOM05D003506 ORTHO05D004063 1.9e-09 67.0 62 59.7
ECA248G2101 Erigeron canadensis HOM05D003506 ORTHO05D004063 1.9e-09 67.0 106 39.6
Aqoxy1G02153 Aquilegia oxysepala HOM05D003506 ORTHO05D004063 2.4e-09 66.6 103 41.7
CiPaw.11G083500 Carya illinoinensis HOM05D003506 ORTHO05D004063 2.4e-09 66.6 131 37.4
QL12p010090 Quercus lobata HOM05D003506 ORTHO05D004063 3.2e-09 66.2 114 36.8
MELO3C005504.2 Cucumis melo HOM05D003506 ORTHO05D004063 4.1e-09 65.9 142 35.2
QL12p010199 Quercus lobata HOM05D003506 ORTHO05D004063 5.4e-09 65.5 113 35.4
CsaV3_5G004570 Cucumis sativus L. HOM05D003506 ORTHO05D004063 7.0e-09 65.1 132 34.8
Cfa001535 Carpinus fangiana HOM05D003506 ORTHO05D004063 9.2e-09 64.7 115 40.9
THA.LOC104806185 Tarenaya hassleriana HOM05D003506 ORTHO05D004063 9.2e-09 64.7 116 36.2
THA.LOC109116396 Tarenaya hassleriana HOM05D003506 ORTHO05D004063 1.2e-08 64.3 124 36.3
MBI18_g07920_MAGBIO Magnolia biondii HOM05D008432 ORTHO05D010288 1.6e-08 63.9 117 38.5
MBI18_g33707_MAGBIO Magnolia biondii HOM05D008432 ORTHO05D010288 1.6e-08 63.9 134 33.6
Eucgr.E00383 Eucalyptus grandis HOM05D003506 ORTHO05D004063 2.0e-08 63.5 92 43.5
Potri.003G101000 Populus trichocarpa HOM05D003506 ORTHO05D004063 2.0e-08 63.5 112 35.7
Nn1g03848 Nelumbo nucifera HOM05D003506 ORTHO05D004063 6.0e-08 62.0 105 41.0
AL7G35000 Arabidopsis lyrata HOM05D000432 ORTHO05D004063 7.8e-08 61.6 118 37.3
CANSAT56G2852 Cannabis sativa HOM05D003506 ORTHO05D004063 7.8e-08 61.6 113 33.6
DCAR_013527 Daucus carota HOM05D003506 ORTHO05D004063 7.8e-08 61.6 110 39.1
MBI18_g30506_MAGBIO Magnolia biondii HOM05D008432 ORTHO05D010288 1.0e-07 61.2 117 37.6
Aa31LG9G7510 Aethionema arabicum HOM05D003506 ORTHO05D004063 1.7e-07 60.5 101 40.6
Thecc.03G312300 Theobroma cacao HOM05D003506 ORTHO05D004063 1.7e-07 60.5 95 41.1
BcaNung04016 Brassica carinata HOM05D003506 ORTHO05D004063 3.9e-07 59.3 123 35.0
Gorai.004G181200 Gossypium raimondii HOM05D003506 ORTHO05D004063 5.0e-07 58.9 91 38.5
Gohir.D08G173500 Gossypium hirsutum HOM05D003506 ORTHO05D004063 6.6e-07 58.5 91 38.5
Sed0023391 Sechium edule HOM05D003506 ORTHO05D004063 6.6e-07 58.5 112 35.7
Aa31LG6G1760 Aethionema arabicum HOM05D003506 ORTHO05D004063 1.5e-06 57.4 121 34.7
Gohir.A08G152600 Gossypium hirsutum HOM05D003506 ORTHO05D004063 1.5e-06 57.4 84 40.5
MBI05_g05724_MAGBIO Magnolia biondii HOM05D008432 ORTHO05D010288 1.9e-06 57.0 134 34.3
Eucgr.D00770 Eucalyptus grandis HOM05D003506 ORTHO05D004063 2.5e-06 56.6 133 31.6
Eucgr.G01441 Eucalyptus grandis HOM05D003506 ORTHO05D004063 3.3e-06 56.2 125 30.4
THA.LOC104798470 Tarenaya hassleriana HOM05D002287 ORTHO05D004063 4.3e-06 55.8 118 37.3
COL.COLO4_16912 Corchorus olitorius HOM05D003506 ORTHO05D004063 5.6e-06 55.5 84 41.7
Duzib205G1851 Durio zibethinus HOM05D003506 ORTHO05D004063 5.6e-06 55.5 73 42.5
MBI18_g30582_MAGBIO Magnolia biondii HOM05D008432 ORTHO05D010288 5.6e-06 55.5 134 33.6


User provided reference genes

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