Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020654 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 1.5e-74 282.7 140 100.0
CSS0013775 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.7e-46 189.5 232 50.0
CSS0044796 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D110760 1.7e-46 189.5 143 72.0
CSS0016329 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.0e-43 178.3 102 81.4
CSS0003177 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.2e-40 168.3 103 78.6
CSS0008534 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 5.1e-30 134.8 90 78.9
CSS0001842 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.8e-22 109.8 56 91.1
Rhsim10G0122700 Rhododendron simsii HOM05D000034 ORTHO05D000277 5.1e-22 108.2 188 37.8
CSS0022902 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.4e-21 104.4 51 92.2
CSS0008714 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 6.0e-15 84.7 51 76.5
Rhsim12G0012100 Rhododendron simsii HOM05D000034 ORTHO05D000277 3.3e-13 79.0 122 38.5
CSS0044841 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.4e-11 72.8 203 29.6
CSS0036504 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 6.9e-11 71.2 203 29.1
Hma1.2p1_0698F.1_g205360 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.9e-11 71.2 140 41.4
Hma1.2p1_0189F.1_g082820 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.2e-10 70.5 176 30.1
Hma1.2p1_0354F.1_g133450 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.2e-10 70.5 96 42.7
Hma1.2p1_0127F.1_g059736 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 8.5e-09 64.3 106 37.7
CSS0047009 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.4e-08 63.5 228 26.3
CSS0036649 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.9e-08 63.2 228 26.3
Hma1.2p1_1237F.1_g269270 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.9e-08 63.2 102 42.2
Hma1.2p1_0035F.1_g021910 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.2e-08 62.4 105 39.0
CSS0021233 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000277 4.2e-08 62.0 225 25.8
Hma1.2p1_0026F.1_g016610 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.2e-08 61.2 168 31.0
Hma1.2p1_2726F.1_g327610 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.1e-07 59.7 63 52.4
CSS0005146 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 6.1e-07 58.2 55 50.9
CSS0029240 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 6.1e-07 58.2 55 50.9
CSS0048286 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 6.1e-07 58.2 55 50.9
CSS0028844 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.9e-07 57.8 227 25.1
CSS0043955 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.0e-06 57.4 81 37.0
Actinidia04327 Actinidia chinensis HOM05D000034 ORTHO05D000037 1.3e-06 57.0 127 37.0
Hma1.2p1_0051F.1_g029380 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.3e-06 57.0 55 54.5
CSS0016739 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.8e-06 56.6 55 49.1
CSS0037331 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.8e-06 56.6 55 49.1
CSS0022790 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.0e-06 55.8 56 53.6
CsaV3_5G027450 Cucumis sativus L. HOM05D000034 ORTHO05D000277 3.0e-06 55.8 97 37.1
CSS0037415 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 5.1e-06 55.1 161 28.0
Hma1.2p1_1839F.1_g304890 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.7e-06 54.7 54 53.7


User provided reference genes

Program Settings