Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020652 Camellia sinensis var. sinensis HOM05D006871 ORTHO05D008544 5.9e-106 387.5 191 100.0
CSS0035923 Camellia sinensis var. sinensis HOM05D006871 ORTHO05D008544 1.7e-105 386.0 191 99.5
Dinv33046 Davidia involucrata HOM05D006871 ORTHO05D008544 4.3e-88 328.2 189 84.1
vmacro02459 Vaccinium macrocarpon HOM05D006871 ORTHO05D008544 9.5e-88 327.0 193 81.9
Actinidia24342 Actinidia chinensis HOM05D006871 ORTHO05D008544 4.9e-84 314.7 192 80.2
Actinidia32224 Actinidia chinensis HOM05D006871 ORTHO05D008544 4.1e-83 311.6 193 78.2
Rhsim13G0011300 Rhododendron simsii HOM05D000121 ORTHO05D000102 4.1e-83 311.6 191 79.6
Cfa005931 Carpinus fangiana HOM05D006871 ORTHO05D008544 7.8e-82 307.4 198 75.3
Lsat_1_v5_gn_8_53460 Lactuca sativa HOM05D006871 ORTHO05D008544 7.8e-82 307.4 188 77.1
Atru.chr5.1162 Acer truncatum HOM05D006871 ORTHO05D008544 1.9e-80 302.8 188 76.6
HanXRQChr06g0163831 Helianthus annuus HOM05D006871 ORTHO05D008544 1.9e-80 302.8 189 77.2
Hma1.2p1_0491F.1_g164460 Hydrangea macrophylla HOM05D006871 ORTHO05D008544 2.5e-80 302.4 189 79.9
Duzib138G1907 Durio zibethinus HOM05D006871 ORTHO05D008544 9.6e-80 300.4 191 75.9
Haze_04913 Corylus avellana HOM05D006871 ORTHO05D008544 3.6e-79 298.5 195 73.8
Thecc.01G298700 Theobroma cacao HOM05D006871 ORTHO05D008544 4.7e-79 298.1 191 75.9
Duzib133G1442 Durio zibethinus HOM05D006871 ORTHO05D008544 1.1e-78 297.0 191 74.9
GSVIVG01027991001 Vitis vinifera HOM05D006871 ORTHO05D008544 6.9e-78 294.3 195 73.8
SalBow3G3208 Salvia bowleyana HOM05D006871 ORTHO05D008544 1.5e-77 293.1 189 74.1
TAR633G1007 Trochodendron aralioides HOM05D006871 ORTHO05D008544 1.5e-77 293.1 192 75.5
PGR119G1195 Punica granatum HOM05D006871 ORTHO05D008544 2.0e-77 292.7 198 72.2
PGR119G1688 Punica granatum HOM05D006871 ORTHO05D008544 2.0e-77 292.7 198 72.2
Cpa.g.sc9.224 Carica papaya HOM05D000121 ORTHO05D000102 2.6e-77 292.4 197 69.0
Lj2A1192T47 Lonicera japonica HOM05D006871 ORTHO05D008544 2.6e-77 292.4 192 76.0
Gohir.A08G101400 Gossypium hirsutum HOM05D006871 ORTHO05D008544 3.4e-77 292.0 191 73.8
Potri.014G130400 Populus trichocarpa HOM05D006871 ORTHO05D008544 3.4e-77 292.0 190 74.7
Manes.05G063100 Manihot esculenta HOM05D006871 ORTHO05D008544 4.4e-77 291.6 189 74.6
Gohir.D08G084900 Gossypium hirsutum HOM05D006871 ORTHO05D008544 1.3e-76 290.0 191 73.3
Oeu032105.1 Olea europaea HOM05D006871 ORTHO05D008544 4.9e-76 288.1 190 74.2
EL10Ac7g17459 Beta vulgaris HOM05D006871 ORTHO05D008544 8.4e-76 287.3 191 73.3
COL.COLO4_23360 Corchorus olitorius HOM05D006871 ORTHO05D008544 8.4e-76 287.3 185 74.6
Sc05g0003970 Simmondsia chinensis HOM05D006871 ORTHO05D008544 8.4e-76 287.3 188 74.5
Sabra14G0097000 Salix brachista HOM05D006871 ORTHO05D008544 1.1e-75 287.0 190 73.7
MSTRG.18162 Avicennia marina HOM05D006871 ORTHO05D008544 2.4e-75 285.8 188 71.8
Ciclev10022428m.g Citrus clementina HOM05D006871 ORTHO05D008544 2.4e-75 285.8 187 74.9
TWI14G0013 Tripterygium wilfordii HOM05D006871 ORTHO05D008544 3.2e-75 285.4 188 73.4
Nitab4.5_0002469g0070 Nicotiana tabacum HOM05D006871 ORTHO05D008544 2.7e-74 282.3 194 71.1
PGSC0003DMG400011375 Solanum tuberosum HOM05D006871 ORTHO05D008544 2.7e-74 282.3 197 71.6
CiPaw.07G107300 Carya illinoinensis HOM05D006871 ORTHO05D008544 3.5e-74 282.0 190 72.1
AUR62033118 Chenopodium quinoa HOM05D006871 ORTHO05D008544 4.6e-74 281.6 194 71.6
Solyc09g075030.3 Solanum lycopersicum HOM05D006871 ORTHO05D008544 1.0e-73 280.4 198 71.2
BcaC05g24587 Brassica carinata HOM05D006871 ORTHO05D008544 1.7e-73 279.6 192 67.7
C05p01490 Brassica napus HOM05D006871 ORTHO05D008544 1.7e-73 279.6 192 67.7
BolC5t28931H Brassica oleracea HOM05D006871 ORTHO05D008544 2.3e-73 279.3 192 67.7
SGA_v2.0_scaffold1G00373 Striga asiatica HOM05D001198 ORTHO05D008544 2.3e-73 279.3 188 70.2
BraA10t42428Z Brassica rapa HOM05D006871 ORTHO05D008544 3.0e-73 278.9 192 67.7
Migut.D00207 Erythranthe guttata HOM05D006871 ORTHO05D008544 5.1e-73 278.1 189 69.3
Thhalv10008837m.g Eutrema salsugineum HOM05D006871 ORTHO05D008544 8.7e-73 277.3 192 67.7
A10p01520 Brassica napus HOM05D006871 ORTHO05D008544 1.1e-72 276.9 192 67.2
Nitab4.5_0011307g0010 Nicotiana tabacum HOM05D006871 ORTHO05D008544 1.5e-72 276.6 193 69.9
Peaxi162Scf00001g00482 Petunia axillaris HOM05D006871 ORTHO05D008544 1.5e-72 276.6 190 70.5
ClCG09G005940 Citrullus lanatus HOM05D006871 ORTHO05D008544 1.9e-72 276.2 191 69.1
Hund18131 Selenicereus undatus HOM05D006871 ORTHO05D008544 1.9e-72 276.2 229 60.7
Prupe.8G259900 Prunus persica HOM05D006871 ORTHO05D008544 2.5e-72 275.8 191 71.2
Sp1g01860 Schrenkiella parvula HOM05D006871 ORTHO05D008544 2.5e-72 275.8 195 66.7
THA.LOC104801274 Tarenaya hassleriana HOM05D006871 ORTHO05D008544 3.3e-72 275.4 192 67.2
CARHR002210 Cardamine hirsuta HOM05D006871 ORTHO05D008544 5.6e-72 274.6 195 65.1
MD11G1313700 Malus domestica HOM05D006871 ORTHO05D008544 5.6e-72 274.6 194 69.1
Sopen09g029850 Solanum pennellii HOM05D006871 ORTHO05D008544 7.3e-72 274.2 198 69.7
MELO3C016009.2 Cucumis melo HOM05D006871 ORTHO05D008544 9.6e-72 273.9 191 70.7
THA.LOC104815930 Tarenaya hassleriana HOM05D006871 ORTHO05D008544 1.3e-71 273.5 192 66.7
Gorai.004G089300 Gossypium raimondii HOM05D006871 ORTHO05D008544 1.6e-71 273.1 224 62.5
BcaB03g15758 Brassica carinata HOM05D006871 ORTHO05D008544 4.8e-71 271.6 193 67.9
PSO210G5360 Papaver somniferum HOM05D006871 ORTHO05D008544 6.2e-71 271.2 190 71.6
PSO832G2873 Papaver somniferum HOM05D006871 ORTHO05D008544 6.2e-71 271.2 190 71.6
AT1G02870 Arabidopsis thaliana HOM05D006871 ORTHO05D008544 8.1e-71 270.8 192 65.1
Cc09_g05510 Coffea canephora HOM05D006871 ORTHO05D008544 8.1e-71 270.8 187 70.1
CANSAT25G1157 Cannabis sativa HOM05D006871 ORTHO05D008544 1.1e-70 270.4 194 68.0
CANSAT25G3267 Cannabis sativa HOM05D006871 ORTHO05D008544 1.1e-70 270.4 194 68.0
CsaV3_7G029180 Cucumis sativus L. HOM05D006871 ORTHO05D008544 1.1e-70 270.4 191 69.1
Eucgr.H01153 Eucalyptus grandis HOM05D006871 ORTHO05D008544 2.4e-70 269.2 204 68.1
AL1G12280 Arabidopsis lyrata HOM05D006871 ORTHO05D008544 4.0e-70 268.5 192 65.1
Sed0022553 Sechium edule HOM05D006871 ORTHO05D008544 6.9e-70 267.7 193 67.4
Carub.0001s0199 Capsella rubella HOM05D006871 ORTHO05D008544 9.0e-70 267.3 192 65.6
ECA236G5112 Erigeron canadensis HOM05D006871 ORTHO05D008544 9.0e-70 267.3 189 69.8
Lalb_Chr18g0047051 Lupinus albus HOM05D006871 ORTHO05D008544 9.0e-70 267.3 193 68.9
unitig_0.g659 Utricularia gibba HOM05D006871 ORTHO05D008544 7.6e-69 264.2 187 65.8
Aa31LG1G9720 Aethionema arabicum HOM05D006871 ORTHO05D008544 1.7e-68 263.1 192 64.1
CAN.G339.16 Capsicum annuum HOM05D006871 ORTHO05D008544 1.7e-68 263.1 187 71.7
RcHm_v2.0_Chr6g0293791 Rosa chinensis HOM05D006871 ORTHO05D008544 2.2e-68 262.7 192 67.7
arahy.Tifrunner.gnm1.ann1.KXN2DA Arachis hypogaea HOM05D006871 ORTHO05D008544 8.4e-68 260.8 188 69.1
Aqoxy5G00741 Aquilegia oxysepala HOM05D006871 ORTHO05D008544 1.4e-67 260.0 188 67.0
C08p00260 Brassica napus HOM05D006871 ORTHO05D008544 1.4e-67 260.0 197 64.5
BolC8t46828H Brassica oleracea HOM05D006871 ORTHO05D008544 3.2e-67 258.8 197 64.0
arahy.Tifrunner.gnm1.ann1.K3SJ5I Arachis hypogaea HOM05D006871 ORTHO05D008544 5.4e-67 258.1 188 67.6
CDE05G0468 Ceratophyllum demersum HOM05D006871 ORTHO05D008544 3.5e-66 255.4 187 66.8
CiPaw.08G096300 Carya illinoinensis HOM05D006871 ORTHO05D008544 1.3e-65 253.4 190 65.3
QL12p027406 Quercus lobata HOM05D006871 ORTHO05D008544 3.9e-65 251.9 182 68.7
AUR62008650 Chenopodium quinoa HOM05D006871 ORTHO05D008544 1.6e-63 246.5 277 50.9
VMungo0720G2524 Vigna mungo HOM05D006871 ORTHO05D008544 3.1e-62 242.3 188 65.4
Phvul.007G143800 Phaseolus vulgaris HOM05D006871 ORTHO05D008544 5.3e-62 241.5 188 66.0
FvH4_2g25580 Fragaria vesca HOM05D006871 ORTHO05D008544 2.0e-61 239.6 192 63.5
Lj1g0003126 Lotus japonicus HOM05D006871 ORTHO05D008544 5.8e-61 238.0 190 64.7
FAN20G2591 Fragaria x ananassa HOM05D006871 ORTHO05D008544 7.6e-61 237.7 192 63.5
FAN27G2794 Fragaria x ananassa HOM05D006871 ORTHO05D008544 1.3e-60 236.9 192 63.0
Nn3g21461 Nelumbo nucifera HOM05D006871 ORTHO05D008544 2.2e-60 236.1 153 77.1
Glyma.10G018900 Glycine max HOM05D006871 ORTHO05D008544 4.2e-59 231.9 187 63.1
ATR0796G034 Amborella trichopoda HOM05D006871 ORTHO05D008544 9.3e-59 230.7 189 60.8
Medtr1g088670 Medicago truncatula HOM05D006871 ORTHO05D008544 1.0e-57 227.3 189 61.4
Glyma.02G155400 Glycine max HOM05D006871 ORTHO05D008544 1.8e-57 226.5 189 62.4
Psat6g165000 Pisum sativum HOM05D006871 ORTHO05D008544 7.4e-56 221.1 189 60.8
Os05g0367100 Oryza sativa ssp. japonica HOM05D006871 ORTHO05D008544 9.6e-56 220.7 185 61.6
Zm00001eb285510 Zea mays HOM05D006871 ORTHO05D008544 2.1e-55 219.5 181 62.4
HPP92_013720 Vanilla planifolia HOM05D006871 ORTHO05D008544 2.8e-55 219.2 184 61.4
Ca_10345_v3 Cicer arietinum L. HOM05D006871 ORTHO05D008544 4.8e-55 218.4 188 60.1
FAN24G1547 Fragaria x ananassa HOM05D006871 ORTHO05D008544 1.3e-52 210.3 186 59.1
BcaC07g36990 Brassica carinata HOM05D006871 ORTHO05D008544 5.1e-49 198.4 152 62.5
Pp3c25_320 Physcomitrium patens HOM05D006871 ORTHO05D008544 7.7e-37 157.9 182 48.9
MBI19_g13201_MAGBIO Magnolia biondii HOM05D006871 ORTHO05D008544 2.2e-36 156.4 114 67.5
AagrBONN_evm.TU.Sc2ySwM_117.3922 Anthoceros agrestis HOM05D006871 ORTHO05D008544 3.8e-36 155.6 181 45.3
DCAR_002824 Daucus carota HOM05D006871 ORTHO05D008544 6.1e-34 148.3 111 63.1
CDE11G0846 Ceratophyllum demersum HOM05D006871 ORTHO05D008544 4.5e-29 132.1 111 59.5
Mapoly0043s0113 Marchantia polymorpha HOM05D006871 ORTHO05D008544 3.2e-27 125.9 182 42.3
Psat1g156280 Pisum sativum HOM05D006871 ORTHO05D008544 4.5e-21 105.5 117 51.3
MD05G1198200 Malus domestica HOM05D006871 ORTHO05D008544 1.2e-18 97.4 57 75.4
Nitab4.5_0000119g0320 Nicotiana tabacum HOM05D006871 ORTHO05D008544 4.8e-15 85.5 47 78.7
CBR_g19096 Chara braunii HOM05D006871 ORTHO05D008544 3.1e-14 82.8 77 53.2
Cre17.g726650 Chlamydomonas reinhardtii HOM05D006871 ORTHO05D008544 2.0e-13 80.1 188 31.4
MD03G1286500 Malus domestica HOM05D006871 ORTHO05D008544 3.0e-09 66.2 35 80.0
MCO15G582 Micromonas commoda HOM05D006871 ORTHO05D008544 5.2e-09 65.5 205 27.3
RcHm_v2.0_Chr2g0134071 Rosa chinensis HOM05D006871 ORTHO05D008544 8.8e-09 64.7 60 56.7


User provided reference genes

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