Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020581 Camellia sinensis var. sinensis HOM05D051327 ORTHO05D111659 3.7e-28 127.5 64 100.0
CSS0005497 Camellia sinensis var. sinensis HOM05D051327 ORTHO05D113537 1.7e-20 102.1 58 84.5
CAN.G911.7 Capsicum annuum HOM05D003545 ORTHO05D004720 1.8e-06 55.5 31 83.9
Nitab4.5_0002417g0010 Nicotiana tabacum HOM05D003545 ORTHO05D004720 1.8e-06 55.5 31 83.9
Nitab4.5_0011686g0010 Nicotiana tabacum HOM05D003545 ORTHO05D004720 1.8e-06 55.5 31 83.9
Potri.017G133200 Populus trichocarpa HOM05D003545 ORTHO05D004720 1.8e-06 55.5 31 83.9
PGSC0003DMG400021374 Solanum tuberosum HOM05D003545 ORTHO05D004720 1.8e-06 55.5 31 83.9
unitig_747.g21724 Utricularia gibba HOM05D003545 ORTHO05D004720 1.8e-06 55.5 31 83.9
Dinv14603 Davidia involucrata HOM05D003545 ORTHO05D004720 3.1e-06 54.7 31 80.6
Solyc01g006800.4 Solanum lycopersicum HOM05D003545 ORTHO05D004720 4.0e-06 54.3 31 80.6
Sopen01g002780 Solanum pennellii HOM05D003545 ORTHO05D004720 4.0e-06 54.3 31 80.6
HanXRQChr12g0379661 Helianthus annuus HOM05D003545 ORTHO05D004720 5.2e-06 53.9 32 78.1
AagrBONN_evm.TU.Sc2ySwM_362.208 Anthoceros agrestis HOM05D003545 ORTHO05D004720 6.8e-06 53.5 31 74.2
CSS0015354 Camellia sinensis var. sinensis HOM05D003545 ORTHO05D004720 6.8e-06 53.5 31 80.6
CDE07G0638 Ceratophyllum demersum HOM05D003545 ORTHO05D004720 6.8e-06 53.5 31 80.6
Cc03_g16260 Coffea canephora HOM05D003545 ORTHO05D004720 6.8e-06 53.5 31 80.6
Haze_01811 Corylus avellana HOM05D003545 ORTHO05D004720 6.8e-06 53.5 31 80.6
ECA246G2273 Erigeron canadensis HOM05D003545 ORTHO05D004720 6.8e-06 53.5 32 75.0
MD17G1285400 Malus domestica HOM05D003545 ORTHO05D004720 6.8e-06 53.5 31 80.6
Nn1g09395 Nelumbo nucifera HOM05D003545 ORTHO05D004720 6.8e-06 53.5 31 80.6
Pp3c18_2250 Physcomitrium patens HOM05D003545 ORTHO05D004720 6.8e-06 53.5 31 80.6
Pp3c18_2370 Physcomitrium patens HOM05D003545 ORTHO05D004720 6.8e-06 53.5 31 80.6
Potri.004G084800 Populus trichocarpa HOM05D003545 ORTHO05D004720 6.8e-06 53.5 31 80.6
Rhsim09G0000700 Rhododendron simsii HOM05D003545 ORTHO05D004720 6.8e-06 53.5 33 75.8
RcHm_v2.0_Chr1g0328121 Rosa chinensis HOM05D003545 ORTHO05D004720 6.8e-06 53.5 31 80.6
Sabra04G0056000 Salix brachista HOM05D003545 ORTHO05D004720 6.8e-06 53.5 31 80.6
vmacro00738 Vaccinium macrocarpon HOM05D003545 ORTHO05D004720 6.8e-06 53.5 33 75.8
GSVIVG01027489001 Vitis vinifera HOM05D003545 ORTHO05D004720 6.8e-06 53.5 31 80.6
Aqoxy5G02072 Aquilegia oxysepala HOM05D003545 ORTHO05D004720 8.9e-06 53.1 31 77.4
Aqoxy5G02074 Aquilegia oxysepala HOM05D003545 ORTHO05D004720 8.9e-06 53.1 31 77.4
Cpa.g.sc9.232 Carica papaya HOM05D003545 ORTHO05D004720 8.9e-06 53.1 31 77.4


User provided reference genes

Program Settings