Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020580 Camellia sinensis var. sinensis HOM05D000539 ORTHO05D000233 1.8e-46 188.7 83 100.0
CSS0026465 Camellia sinensis var. sinensis HOM05D000539 ORTHO05D000233 2.1e-23 112.1 64 78.1
CSS0023486 Camellia sinensis var. sinensis HOM05D000616 ORTHO05D000233 3.0e-22 108.2 64 75.0
Rhsim01G0018800 Rhododendron simsii HOM05D000539 ORTHO05D000233 9.8e-13 76.6 71 50.7
Rhsim03G0043700 Rhododendron simsii HOM05D000539 ORTHO05D000592 2.8e-12 75.1 70 51.4
RhsimUnG0040200 Rhododendron simsii HOM05D000539 ORTHO05D000592 2.8e-12 75.1 70 51.4
Rhsim08G0058500 Rhododendron simsii HOM05D000539 ORTHO05D000592 4.8e-12 74.3 58 56.9
Rhsim08G0058700 Rhododendron simsii HOM05D000539 ORTHO05D000592 4.8e-12 74.3 58 56.9
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.3e-12 73.9 56 58.9
Rhsim01G0127800 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.2e-10 69.7 60 51.7
Rhsim02G0146100 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.2e-10 69.7 44 63.6
Rhsim09G0096300 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.2e-10 69.7 60 51.7
vmacro04479 Vaccinium macrocarpon HOM05D000539 ORTHO05D000233 1.2e-10 69.7 60 50.0
RhsimUnG0164900 Rhododendron simsii HOM05D000539 ORTHO05D000233 2.0e-10 68.9 68 45.6
Rhsim01G0018900 Rhododendron simsii HOM05D000539 ORTHO05D000233 2.7e-10 68.6 59 47.5
Rhsim02G0154800 Rhododendron simsii HOM05D000107 ORTHO05D000062 5.0e-09 64.3 62 46.8
Rhsim05G0213000 Rhododendron simsii HOM05D000539 ORTHO05D000233 6.5e-09 63.9 41 63.4
Rhsim05G0145300 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.2e-07 59.7 51 52.9
Rhsim05G0020800 Rhododendron simsii HOM05D000539 ORTHO05D000233 1.6e-07 59.3 37 64.9
RcHm_v2.0_Chr6g0261571 Rosa chinensis HOM05D000539 ORTHO05D000592 2.7e-07 58.5 64 35.9
FvH4_1g20221 Fragaria vesca HOM05D000539 ORTHO05D000233 3.6e-07 58.2 73 32.9
RcHm_v2.0_Chr2g0112301 Rosa chinensis HOM05D000539 ORTHO05D000233 1.4e-06 56.2 73 31.5
SHI32661 Sapria himalayana HOM05D000616 ORTHO05D000233 1.8e-06 55.8 48 50.0
SHI15762 Sapria himalayana HOM05D003883 ORTHO05D004605 2.3e-06 55.5 48 52.1
SHI19528 Sapria himalayana HOM05D000616 ORTHO05D000233 2.3e-06 55.5 46 52.2
SHI39548 Sapria himalayana HOM05D000616 ORTHO05D000233 2.3e-06 55.5 46 52.2
SHI43638 Sapria himalayana HOM05D000616 ORTHO05D000233 2.3e-06 55.5 46 52.2
SHI43952 Sapria himalayana HOM05D000616 ORTHO05D000233 2.3e-06 55.5 46 52.2
SHI19985 Sapria himalayana HOM05D000616 ORTHO05D000233 4.0e-06 54.7 46 50.0
SHI36792 Sapria himalayana HOM05D000616 ORTHO05D000062 4.0e-06 54.7 46 52.2
Atru.chr7.1246 Acer truncatum HOM05D000539 ORTHO05D000592 6.8e-06 53.9 56 44.6
FAN28G1329 Fragaria x ananassa HOM05D000723 ORTHO05D001760 6.8e-06 53.9 51 39.2
SHI22978 Sapria himalayana HOM05D000616 ORTHO05D000233 6.8e-06 53.9 46 50.0
Atru.chr1.738 Acer truncatum HOM05D000539 ORTHO05D000592 8.8e-06 53.5 46 47.8
FAN23G1195 Fragaria x ananassa HOM05D000723 ORTHO05D001760 8.8e-06 53.5 51 39.2
SHI20637 Sapria himalayana HOM05D000616 ORTHO05D000233 8.8e-06 53.5 46 50.0


User provided reference genes

Program Settings