Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020574 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 2.8e-188 661.8 327 100.0
CSS0018855 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 2.0e-162 575.9 327 89.9
CSS0014683 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 1.0e-161 573.5 286 99.3
vmacro22700 Vaccinium macrocarpon HOM05D007036 ORTHO05D008885 4.7e-151 538.1 328 79.6
Rhsim01G0110100 Rhododendron simsii HOM05D007036 ORTHO05D008885 1.5e-149 533.1 328 79.3
Haze_19103 Corylus avellana HOM05D007036 ORTHO05D008885 3.6e-143 511.9 328 75.6
Cfa020750 Carpinus fangiana HOM05D007036 ORTHO05D008885 3.0e-142 508.8 328 75.3
Ciclev10010414m.g Citrus clementina HOM05D007036 ORTHO05D008885 7.5e-141 504.2 328 73.2
Lj5P749T15 Lonicera japonica HOM05D007036 ORTHO05D008885 2.2e-140 502.7 328 75.0
Atru.chr7.958 Acer truncatum HOM05D007036 ORTHO05D008885 8.3e-140 500.7 328 73.5
RcHm_v2.0_Chr4g0397671 Rosa chinensis HOM05D007036 ORTHO05D008885 9.1e-139 497.3 328 72.9
FAN12G1049 Fragaria x ananassa HOM05D007036 ORTHO05D008885 1.0e-137 493.8 328 73.2
Sabra18G0121200 Salix brachista HOM05D007036 ORTHO05D008885 1.0e-137 493.8 329 72.0
Sabra18G0128300 Salix brachista HOM05D007036 ORTHO05D008885 1.3e-137 493.4 329 72.0
FAN17G1483 Fragaria x ananassa HOM05D007036 ORTHO05D008885 8.5e-137 490.7 328 72.3
TWI34G0744 Tripterygium wilfordii HOM05D007036 ORTHO05D008885 9.4e-136 487.3 328 71.0
Gorai.010G127600 Gossypium raimondii HOM05D007036 ORTHO05D008885 1.2e-135 486.9 329 70.5
Gohir.A06G110000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 2.1e-135 486.1 329 70.5
Gohir.D06G112000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 2.1e-135 486.1 329 70.5
ClCG11G011370 Citrullus lanatus HOM05D007036 ORTHO05D008885 3.6e-135 485.3 328 70.7
Thecc.09G196200 Theobroma cacao HOM05D007036 ORTHO05D008885 3.6e-135 485.3 330 71.8
MELO3C003928.2 Cucumis melo HOM05D007036 ORTHO05D008885 8.0e-135 484.2 328 71.3
CANSAT80G2763 Cannabis sativa HOM05D007036 ORTHO05D008885 1.0e-134 483.8 328 68.3
CsaV3_2G009100 Cucumis sativus L. HOM05D007036 ORTHO05D008885 1.4e-134 483.4 328 71.0
TAR636G0074 Trochodendron aralioides HOM05D007036 ORTHO05D008885 3.0e-134 482.3 328 71.6
Aqoxy7G02614 Aquilegia oxysepala HOM05D007036 ORTHO05D008885 5.7e-133 478.0 328 69.2
Sed0028219 Sechium edule HOM05D007036 ORTHO05D008885 2.8e-132 475.7 328 68.9
Sopen05g027850 Solanum pennellii HOM05D007036 ORTHO05D008885 3.1e-131 472.2 328 69.8
HanXRQChr09g0261951 Helianthus annuus HOM05D007036 ORTHO05D008885 1.2e-130 470.3 328 69.5
Oeu011819.1 Olea europaea HOM05D007036 ORTHO05D008885 1.2e-130 470.3 328 68.6
PGSC0003DMG400013697 Solanum tuberosum HOM05D007036 ORTHO05D008885 1.6e-130 469.9 328 69.5
Lj2g0012301 Lotus japonicus HOM05D007036 ORTHO05D008885 4.5e-130 468.4 328 66.8
Lalb_Chr19g0129471 Lupinus albus HOM05D007036 ORTHO05D008885 2.3e-129 466.1 328 67.4
Potri.018G146900 Populus trichocarpa HOM05D007036 ORTHO05D008885 2.3e-129 466.1 329 69.6
Duzib168G0358 Durio zibethinus HOM05D007036 ORTHO05D008885 5.0e-129 464.9 329 68.7
Peaxi162Scf00954g00025 Petunia axillaris HOM05D007036 ORTHO05D008885 5.0e-129 464.9 328 69.8
CAN.G106.6 Capsicum annuum HOM05D007036 ORTHO05D008885 6.6e-129 464.5 328 68.9
Lsat_1_v5_gn_6_31220 Lactuca sativa HOM05D007036 ORTHO05D008885 1.9e-128 463.0 329 68.7
Medtr0004s0610 Medicago truncatula HOM05D007036 ORTHO05D008885 1.9e-128 463.0 329 65.0
Medtr1g051205 Medicago truncatula HOM05D007036 ORTHO05D008885 2.3e-126 456.1 323 65.0
Glyma.03G035400 Glycine max HOM05D007036 ORTHO05D008885 3.0e-126 455.7 328 64.3
MSTRG.5959 Avicennia marina HOM05D007036 ORTHO05D008885 1.5e-125 453.4 313 71.6
Glyma.01G132800 Glycine max HOM05D007036 ORTHO05D008885 1.5e-125 453.4 328 63.7
Phvul.011G085400 Phaseolus vulgaris HOM05D007036 ORTHO05D008885 4.4e-125 451.8 328 63.4
TPR.G36679 Trifolium pratense HOM05D007036 ORTHO05D008885 4.4e-125 451.8 329 63.8
FvH4_4g06090 Fragaria vesca HOM05D007036 ORTHO05D008885 9.8e-125 450.7 298 73.8
Phvul.010G069800 Phaseolus vulgaris HOM05D007036 ORTHO05D008885 9.8e-125 450.7 328 63.1
MD11G1028400 Malus domestica HOM05D007036 ORTHO05D008885 2.8e-124 449.1 329 68.1
arahy.Tifrunner.gnm1.ann1.UBG147 Arachis hypogaea HOM05D007036 ORTHO05D008885 3.2e-123 445.7 328 64.0
Nitab4.5_0000404g0190 Nicotiana tabacum HOM05D007036 ORTHO05D008885 3.2e-123 445.7 325 67.7
AUR62029463 Chenopodium quinoa HOM05D007036 ORTHO05D008885 5.4e-123 444.9 314 67.2
arahy.Tifrunner.gnm1.ann1.1YAE55 Arachis hypogaea HOM05D007036 ORTHO05D008885 1.2e-122 443.7 328 63.4
Migut.J00838 Erythranthe guttata HOM05D007036 ORTHO05D008885 5.0e-121 438.3 328 63.7
FAN07G1271 Fragaria x ananassa HOM05D007036 ORTHO05D008885 1.5e-120 436.8 310 69.7
Psat1g099640 Pisum sativum HOM05D007036 ORTHO05D008885 1.9e-120 436.4 329 62.0
Ah.07g208320 Amaranthus hybridus HOM05D007036 ORTHO05D008885 2.1e-119 433.0 318 65.1
AL5G20840 Arabidopsis lyrata HOM05D007036 ORTHO05D008885 6.1e-119 431.4 327 62.1
ECA236G1169 Erigeron canadensis HOM05D007036 ORTHO05D008885 1.2e-117 427.2 311 66.6
AT3G42630 Arabidopsis thaliana HOM05D007036 ORTHO05D008885 3.4e-117 425.6 328 61.0
VMungo0331G1618 Vigna mungo HOM05D007036 ORTHO05D008885 2.9e-116 422.5 326 59.8
Aa31LG4G9890 Aethionema arabicum HOM05D007036 ORTHO05D008885 1.9e-115 419.9 328 60.4
Carub.0001s3409 Capsella rubella HOM05D007036 ORTHO05D008885 2.4e-115 419.5 328 61.3
Cc00_g00150 Coffea canephora HOM05D007036 ORTHO05D008885 3.2e-115 419.1 328 62.8
unitig_26.g9126 Utricularia gibba HOM05D007036 ORTHO05D008885 5.4e-115 418.3 325 63.7
Sc16g0002180 Simmondsia chinensis HOM05D007036 ORTHO05D008885 7.0e-115 417.9 329 63.8
Manes.01G260400 Manihot esculenta HOM05D007036 ORTHO05D008885 7.8e-114 414.5 328 64.0
A06p20770 Brassica napus HOM05D007036 ORTHO05D008885 6.6e-113 411.4 328 59.8
BcaB01g00982 Brassica carinata HOM05D007036 ORTHO05D008885 1.9e-112 409.8 328 60.4
BraA06t25155Z Brassica rapa HOM05D007036 ORTHO05D008885 2.5e-112 409.5 328 59.8
Sp5g14950 Schrenkiella parvula HOM05D007036 ORTHO05D008885 5.6e-112 408.3 328 58.8
BcaC01g01887 Brassica carinata HOM05D007036 ORTHO05D008885 9.5e-112 407.5 328 59.5
C03p70950 Brassica napus HOM05D007036 ORTHO05D008885 2.1e-111 406.4 328 59.1
BolC3t19373H Brassica oleracea HOM05D007036 ORTHO05D008885 4.7e-111 405.2 328 59.1
Medtr5g068170 Medicago truncatula HOM05D007036 ORTHO05D008885 8.9e-110 401.0 327 58.7
Carub.0016s0003 Capsella rubella HOM05D007036 ORTHO05D008885 2.0e-109 399.8 320 59.7
Prupe.1G064400 Prunus persica HOM05D007036 ORTHO05D008885 7.5e-109 397.9 328 61.3
GSVIVG01032259001 Vitis vinifera HOM05D007036 ORTHO05D008885 1.3e-108 397.1 328 63.4
QL11p008742 Quercus lobata HOM05D007036 ORTHO05D008885 4.9e-108 395.2 327 60.6
Cpa.g.sc115.26 Carica papaya HOM05D007036 ORTHO05D008885 1.4e-107 393.7 246 76.8
PGR083G2517 Punica granatum HOM05D007036 ORTHO05D008885 2.1e-106 389.8 332 56.9
DCAR_020462 Daucus carota HOM05D007036 ORTHO05D008885 1.7e-105 386.7 327 60.6
Nn5g27062 Nelumbo nucifera HOM05D007036 ORTHO05D008885 1.7e-105 386.7 328 59.5
CARHR153640 Cardamine hirsuta HOM05D007036 ORTHO05D008885 1.1e-104 384.0 328 55.8
MD13G1233100 Malus domestica HOM05D007036 ORTHO05D008885 1.1e-104 384.0 377 56.8
SGA_v2.0_scaffold318G48469 Striga asiatica HOM05D007036 ORTHO05D008885 1.5e-104 383.6 328 57.6
MBI13_g34303_MAGBIO Magnolia biondii HOM05D007036 ORTHO05D008885 2.8e-103 379.4 328 59.1
Thhalv10003041m.g Eutrema salsugineum HOM05D007036 ORTHO05D008885 2.6e-101 372.9 328 54.9
Os08g0520200 Oryza sativa ssp. japonica HOM05D007036 ORTHO05D008885 2.3e-97 359.8 330 52.7
VMungo0540G1720 Vigna mungo HOM05D007036 ORTHO05D008885 3.0e-97 359.4 246 67.5
HPP92_028312 Vanilla planifolia HOM05D007036 ORTHO05D008885 2.5e-96 356.3 328 54.6
Zm00001eb035670 Zea mays HOM05D007036 ORTHO05D008885 1.6e-95 353.6 330 52.1
PSO063G5690 Papaver somniferum HOM05D007036 ORTHO05D008885 4.7e-95 352.1 301 59.1
ATR0626G201 Amborella trichopoda HOM05D007036 ORTHO05D008885 1.1e-94 350.9 232 72.0
COL.COLO4_04221 Corchorus olitorius HOM05D007036 ORTHO05D008885 2.4e-91 339.7 330 55.5
CiPaw.16G103900 Carya illinoinensis HOM05D007036 ORTHO05D008885 3.2e-91 339.3 208 78.4
PSO170G3146 Papaver somniferum HOM05D007036 ORTHO05D008885 1.6e-90 337.0 208 76.4
CDE04G2486 Ceratophyllum demersum HOM05D007036 ORTHO05D008885 1.2e-85 320.9 291 55.0
Ca_04679_v3 Cicer arietinum L. HOM05D007036 ORTHO05D008885 7.6e-85 318.2 218 69.3
SEGI_31150 Sequoiadendron giganteum HOM05D007036 ORTHO05D008885 6.0e-82 308.5 299 52.5
COL.COLO4_06173 Corchorus olitorius HOM05D007036 ORTHO05D008885 6.6e-81 305.1 326 52.1
Eucgr.C00064 Eucalyptus grandis HOM05D007036 ORTHO05D008885 8.7e-81 304.7 248 60.9
CDE02G1188 Ceratophyllum demersum HOM05D007036 ORTHO05D004232 1.6e-71 273.9 205 65.9
Lj5A765T51 Lonicera japonica HOM05D007036 ORTHO05D008885 2.6e-61 240.0 266 49.2
vmacro20769 Vaccinium macrocarpon HOM05D007036 ORTHO05D008885 2.4e-54 216.9 328 40.2
Oeu028822.1 Olea europaea HOM05D007036 ORTHO05D008885 1.7e-52 210.7 153 66.7
Mapoly0002s0203 Marchantia polymorpha HOM05D007036 ORTHO05D008885 2.7e-42 176.8 199 49.7
Dinv26474 Davidia involucrata HOM05D007036 ORTHO05D008885 4.7e-42 176.0 190 50.5
Pp3c4_3090 Physcomitrium patens HOM05D007036 ORTHO05D008885 1.2e-34 151.4 326 30.7
SMO347G0413 Selaginella moellendorffii HOM05D007036 ORTHO05D008885 6.1e-34 149.1 173 46.2
AagrBONN_evm.TU.Sc2ySwM_228.1431 Anthoceros agrestis HOM05D007036 ORTHO05D008885 2.7e-26 123.6 212 36.3
PGR142G1366 Punica granatum HOM05D007897 ORTHO05D010061 8.0e-18 95.5 249 30.5
Pp3c3_31860 Physcomitrium patens HOM05D007036 ORTHO05D008885 4.0e-17 93.2 174 35.6
COL.COLO4_35959 Corchorus olitorius HOM05D007897 ORTHO05D010061 4.1e-14 83.2 215 31.2
ATR0807G097 Amborella trichopoda HOM05D007897 ORTHO05D010061 9.1e-14 82.0 197 33.0
PSO063G5193 Papaver somniferum HOM05D007897 ORTHO05D010061 7.7e-13 79.0 196 31.6
MBI07_g06195_MAGBIO Magnolia biondii HOM05D007897 ORTHO05D010061 6.6e-12 75.9 196 31.6
VMungo1383G3288 Vigna mungo HOM05D007897 ORTHO05D010061 1.1e-11 75.1 189 31.2
Manes.05G198900 Manihot esculenta HOM05D007897 ORTHO05D010061 1.5e-11 74.7 196 30.6
PSO017G4232 Papaver somniferum HOM05D007897 ORTHO05D010061 1.5e-11 74.7 204 30.9
Phvul.001G265200 Phaseolus vulgaris HOM05D007897 ORTHO05D010061 1.9e-11 74.3 188 31.4
arahy.Tifrunner.gnm1.ann1.TEUF1S Arachis hypogaea HOM05D007897 ORTHO05D010061 2.5e-11 73.9 186 33.9
arahy.Tifrunner.gnm1.ann1.T7EAWL Arachis hypogaea HOM05D007897 ORTHO05D010061 3.3e-11 73.6 186 33.9
Nn8g41262 Nelumbo nucifera HOM05D007897 ORTHO05D010061 7.2e-11 72.4 202 29.7
Lalb_Chr03g0036571 Lupinus albus HOM05D007897 ORTHO05D010061 9.5e-11 72.0 199 32.2
Cc03_g09150 Coffea canephora HOM05D007897 ORTHO05D010061 1.6e-10 71.2 183 31.1
Sabra14G0112700 Salix brachista HOM05D007897 ORTHO05D010061 2.1e-10 70.9 198 28.3
CSS0018651 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 2.8e-10 70.5 202 30.2
CSS0029276 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 2.8e-10 70.5 202 30.2
Sed0009503 Sechium edule HOM05D007897 ORTHO05D010061 3.6e-10 70.1 195 28.7
Potri.014G149500 Populus trichocarpa HOM05D007897 ORTHO05D010061 1.0e-09 68.6 200 29.5
FAN22G1341 Fragaria x ananassa HOM05D007897 ORTHO05D010061 1.4e-09 68.2 298 23.8
Glyma.18G003400 Glycine max HOM05D007897 ORTHO05D010061 1.4e-09 68.2 156 32.7
TWI23G0094 Tripterygium wilfordii HOM05D007897 ORTHO05D010061 1.8e-09 67.8 201 29.9
Sabra06G0059400 Salix brachista HOM05D007036 ORTHO05D008885 3.0e-09 67.0 117 34.2
Duzib212G0894 Durio zibethinus HOM05D007897 ORTHO05D010061 4.0e-09 66.6 181 29.3
FAN17G1799 Fragaria x ananassa HOM05D005839 ORTHO05D005686 1.2e-08 65.1 197 28.9
Oeu050722.1 Olea europaea HOM05D005839 ORTHO05D009229 1.2e-08 65.1 185 29.7
HPP92_007232 Vanilla planifolia HOM05D007897 ORTHO05D010061 1.5e-08 64.7 189 29.6
FAN07G0261 Fragaria x ananassa HOM05D005839 ORTHO05D005686 2.6e-08 63.9 166 30.7
Nn8g40038 Nelumbo nucifera HOM05D006258 ORTHO05D007961 5.7e-08 62.8 267 21.7
FvH4_4g12861 Fragaria vesca HOM05D007897 ORTHO05D010061 7.5e-08 62.4 156 29.5
Oeu050723.3 Olea europaea HOM05D007897 ORTHO05D009229 9.8e-08 62.0 163 30.7
CANSAT78G0179 Cannabis sativa HOM05D007897 ORTHO05D010061 1.3e-07 61.6 154 33.1
Lalb_Chr06g0172791 Lupinus albus HOM05D006258 ORTHO05D007961 2.2e-07 60.8 237 24.5
MD04G1021700 Malus domestica HOM05D007897 ORTHO05D010061 2.9e-07 60.5 153 31.4
Medtr6g034745 Medicago truncatula HOM05D007036 ORTHO05D008885 3.7e-07 60.1 47 53.2
BcaNung03436 Brassica carinata HOM05D006258 ORTHO05D007961 8.3e-07 58.9 261 21.1
Atru.chr7.3 Acer truncatum HOM05D006258 ORTHO05D007961 1.4e-06 58.2 246 21.1
Aa31LG10G8340 Aethionema arabicum HOM05D001779 ORTHO05D001753 3.2e-06 57.0 109 28.4
Manes.05G099800 Manihot esculenta HOM05D000001 ORTHO05D010176 3.2e-06 57.0 255 24.7
Aa31LG2G19560 Aethionema arabicum HOM05D006258 ORTHO05D007961 4.1e-06 56.6 263 20.2
arahy.Tifrunner.gnm1.ann1.FEEJ53 Arachis hypogaea HOM05D006258 ORTHO05D007961 4.1e-06 56.6 259 21.6
CARHR238690 Cardamine hirsuta HOM05D006258 ORTHO05D007961 7.0e-06 55.8 258 23.3
Glyma.09G013600 Glycine max HOM05D002244 ORTHO05D002269 7.0e-06 55.8 64 35.9
Potri.006G005100 Populus trichocarpa HOM05D006258 ORTHO05D007961 9.2e-06 55.5 254 20.9


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