Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020571 Camellia sinensis var. sinensis HOM05D008006 ORTHO05D010181 8.1e-174 613.6 305 100.0
Hma1.2p1_0085F.1_g044170 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 1.7e-102 376.7 340 60.9
Cc07_g12390 Coffea canephora HOM05D008006 ORTHO05D010181 1.2e-97 360.5 318 59.1
Dinv19107 Davidia involucrata HOM05D008006 ORTHO05D007530 2.3e-96 356.3 334 60.5
TAR376G0197 Trochodendron aralioides HOM05D008006 ORTHO05D010181 2.4e-93 346.3 300 61.7
CAN.G883.7 Capsicum annuum HOM05D008006 ORTHO05D010181 5.1e-91 338.6 311 57.9
PGSC0003DMG401009429 Solanum tuberosum HOM05D008006 ORTHO05D010181 5.1e-91 338.6 312 58.3
Nitab4.5_0000443g0190 Nicotiana tabacum HOM05D008006 ORTHO05D010181 6.6e-91 338.2 311 57.2
Oeu023348.1 Olea europaea HOM05D008006 ORTHO05D010181 4.3e-90 335.5 319 57.1
Nitab4.5_0000973g0020 Nicotiana tabacum HOM05D008006 ORTHO05D010181 5.6e-90 335.1 311 57.6
Peaxi162Scf00981g00002 Petunia axillaris HOM05D008006 ORTHO05D010181 4.7e-89 332.0 313 57.8
Sopen02g017480 Solanum pennellii HOM05D008006 ORTHO05D010181 4.7e-89 332.0 313 57.2
Migut.K01160 Erythranthe guttata HOM05D008006 ORTHO05D010181 2.4e-85 319.7 317 54.9
Lsat_1_v5_gn_8_113701 Lactuca sativa HOM05D008006 ORTHO05D010181 2.3e-83 313.2 294 58.2
MSTRG.3655 Avicennia marina HOM05D008006 ORTHO05D010181 3.9e-83 312.4 289 57.1
DCAR_005377 Daucus carota HOM05D008006 ORTHO05D010181 5.1e-83 312.0 314 54.8
SGA_v2.0_scaffold229G43287 Striga asiatica HOM05D008006 ORTHO05D010181 1.1e-82 310.8 296 56.4
MELO3C010256.2 Cucumis melo HOM05D008006 ORTHO05D010181 1.2e-81 307.4 310 55.2
CsaV3_1G028580 Cucumis sativus L. HOM05D008006 ORTHO05D010181 1.2e-79 300.8 319 53.3
ClCG06G012090 Citrullus lanatus HOM05D008006 ORTHO05D010181 2.0e-79 300.1 310 53.9
Cpa.g.sc46.96 Carica papaya HOM05D008006 ORTHO05D010181 8.4e-78 294.7 326 50.3
MBI04_g23901_MAGBIO Magnolia biondii HOM05D008006 ORTHO05D010181 1.1e-77 294.3 277 57.8
Prupe.7G252900 Prunus persica HOM05D008006 ORTHO05D010181 3.2e-77 292.7 281 57.3
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 4.2e-77 292.4 289 52.9
Manes.14G140100 Manihot esculenta HOM05D008006 ORTHO05D010181 5.4e-77 292.0 285 56.5
CANSAT11G1793 Cannabis sativa HOM05D008006 ORTHO05D010181 1.2e-76 290.8 316 52.5
MD15G1157700 Malus domestica HOM05D008006 ORTHO05D010181 1.2e-76 290.8 281 56.2
QL02p091617 Quercus lobata HOM05D008006 ORTHO05D010181 1.6e-76 290.4 315 52.7
Sed0023235 Sechium edule HOM05D008006 ORTHO05D010181 2.7e-76 289.7 291 54.0
CiPaw.15G179000 Carya illinoinensis HOM05D008006 ORTHO05D010181 8.7e-75 284.6 323 54.2
Duzib187G1563 Durio zibethinus HOM05D008006 ORTHO05D010181 3.3e-74 282.7 305 52.5
Gorai.010G110900 Gossypium raimondii HOM05D008006 ORTHO05D010181 3.3e-74 282.7 307 52.4
Haze_19299 Corylus avellana HOM05D008006 ORTHO05D010181 5.6e-74 282.0 310 54.5
Gohir.A06G096100 Gossypium hirsutum HOM05D008006 ORTHO05D010181 5.6e-74 282.0 290 54.1
PGR142G2664 Punica granatum HOM05D008006 ORTHO05D010181 7.3e-74 281.6 306 51.6
COL.COLO4_22070 Corchorus olitorius HOM05D008006 ORTHO05D010181 2.8e-73 279.6 309 50.8
unitig_0.g2635 Utricularia gibba HOM05D008006 ORTHO05D010181 4.8e-73 278.9 289 51.2
Sabra18G0096000 Salix brachista HOM05D008006 ORTHO05D010181 1.1e-72 277.7 290 54.5
Potri.018G112900 Populus trichocarpa HOM05D008006 ORTHO05D010181 2.4e-72 276.6 324 50.9
Cfa020870 Carpinus fangiana HOM05D008006 ORTHO05D010181 4.0e-72 275.8 310 52.9
RcHm_v2.0_Chr2g0086431 Rosa chinensis HOM05D008006 ORTHO05D010181 9.0e-72 274.6 281 54.4
Medtr1g052525 Medicago truncatula HOM05D008006 ORTHO05D010181 2.0e-71 273.5 284 52.5
Thecc.09G037000 Theobroma cacao HOM05D008006 ORTHO05D010181 1.7e-70 270.4 301 51.5
QL02p091673 Quercus lobata HOM05D008006 ORTHO05D010181 2.4e-69 266.5 299 51.2
SalBow5G3372 Salvia bowleyana HOM05D008006 ORTHO05D010181 2.4e-69 266.5 305 51.8
EL10Ac6g14724 Beta vulgaris HOM05D008006 ORTHO05D010181 7.9e-68 261.5 296 52.4
Phvul.009G208600 Phaseolus vulgaris HOM05D008006 ORTHO05D010181 7.9e-68 261.5 283 51.6
Ah.07g202950 Amaranthus hybridus HOM05D008006 ORTHO05D010181 2.5e-66 256.5 299 49.5
VMungo1309G1328 Vigna mungo HOM05D008006 ORTHO05D010181 3.3e-66 256.1 287 50.2
THA.LOC104827422 Tarenaya hassleriana HOM05D008006 ORTHO05D010181 4.3e-66 255.8 306 48.0
FAN28G2644 Fragaria x ananassa HOM05D008006 ORTHO05D010181 1.6e-65 253.8 291 51.9
FvH4_1g01510 Fragaria vesca HOM05D008006 ORTHO05D010181 3.7e-65 252.7 291 51.9
FAN23G1450 Fragaria x ananassa HOM05D008006 ORTHO05D010181 2.4e-64 250.0 291 51.9
Aqoxy6G02620 Aquilegia oxysepala HOM05D008006 ORTHO05D010181 3.1e-64 249.6 290 52.4
Sc03g0006000 Simmondsia chinensis HOM05D008006 ORTHO05D010181 9.9e-63 244.6 307 48.9
Actinidia28771 Actinidia chinensis HOM05D008006 ORTHO05D010181 2.4e-61 240.0 228 56.6
HPP92_022771 Vanilla planifolia HOM05D008006 ORTHO05D010181 1.0e-59 234.6 321 44.9
SEGI_07410 Sequoiadendron giganteum HOM05D008006 ORTHO05D010181 1.3e-57 227.6 289 45.0
Zm00001eb102080 Zea mays HOM05D008006 ORTHO05D010181 1.8e-56 223.8 289 48.1
ATR0605G334 Amborella trichopoda HOM05D008006 ORTHO05D010181 4.0e-56 222.6 324 42.9
AUR62016258 Chenopodium quinoa HOM05D008006 ORTHO05D010181 2.6e-55 219.9 261 49.8
Gohir.D06G096200 Gossypium hirsutum HOM05D008006 ORTHO05D010181 2.6e-47 193.4 240 47.1
HanXRQChr15g0486431 Helianthus annuus HOM05D008006 ORTHO05D010181 6.5e-46 188.7 163 62.0
Mapoly0054s0065 Marchantia polymorpha HOM05D008006 ORTHO05D010181 5.7e-42 175.6 277 42.2
Solyc02g068350.1 Solanum lycopersicum HOM05D008006 ORTHO05D010181 3.8e-38 162.9 172 52.9
AUR62003323 Chenopodium quinoa HOM05D002832 ORTHO05D007530 8.8e-35 151.8 136 58.8
Lalb_Chr11g0072821 Lupinus albus HOM05D008006 ORTHO05D010181 6.3e-33 145.6 110 68.2
AUR62043755 Chenopodium quinoa HOM05D008006 ORTHO05D010181 8.2e-25 118.6 84 72.6
SMO364G0826 Selaginella moellendorffii HOM05D008006 ORTHO05D010181 1.6e-23 114.4 207 36.7
CBR_g4365 Chara braunii HOM05D008006 ORTHO05D010181 1.8e-16 90.9 516 24.2
Cre16.g675000 Chlamydomonas reinhardtii HOM05D008006 ORTHO05D010181 2.0e-15 87.4 291 32.3
FAN26G1902 Fragaria x ananassa HOM05D008006 ORTHO05D010181 5.9e-15 85.9 133 43.6
Hma1.2p1_2924F.1_g330380 Hydrangea macrophylla HOM05D008006 ORTHO05D010181 4.7e-12 76.3 41 78.0
Oeu046642.1 Olea europaea HOM05D008006 ORTHO05D010181 8.3e-09 65.5 108 41.7


User provided reference genes

Program Settings