Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020554 Camellia sinensis var. sinensis HOM05D007756 ORTHO05D009403 1.6e-29 132.1 67 100.0
CSS0041901 Camellia sinensis var. sinensis HOM05D007756 ORTHO05D009403 1.6e-29 132.1 67 100.0
Nitab4.5_0003114g0110 Nicotiana tabacum HOM05D007756 ORTHO05D009403 5.3e-09 63.9 49 65.3
PGSC0003DMG400022448 Solanum tuberosum HOM05D007756 ORTHO05D009403 6.9e-09 63.5 59 57.6
Solyc02g078890.1 Solanum lycopersicum HOM05D007756 ORTHO05D009403 9.0e-09 63.2 60 56.7
Sopen02g023700 Solanum pennellii HOM05D007756 ORTHO05D009403 9.0e-09 63.2 60 56.7
Potri.011G044800 Populus trichocarpa HOM05D007756 ORTHO05D009403 2.0e-08 62.0 48 60.4
Solyc02g078870.1 Solanum lycopersicum HOM05D007756 ORTHO05D009403 2.0e-08 62.0 43 67.4
Gohir.D10G020400 Gossypium hirsutum HOM05D007756 ORTHO05D009403 2.6e-08 61.6 58 60.3
Cc02_g12640 Coffea canephora HOM05D007756 ORTHO05D009403 3.4e-08 61.2 57 59.6
PGSC0003DMG400022450 Solanum tuberosum HOM05D007756 ORTHO05D009403 5.8e-08 60.5 43 67.4
PGSC0003DMG400022449 Solanum tuberosum HOM05D007756 ORTHO05D009403 1.0e-07 59.7 43 67.4
Gohir.D10G020250 Gossypium hirsutum HOM05D007756 ORTHO05D009403 1.7e-07 58.9 58 58.6
Potri.004G036375 Populus trichocarpa HOM05D007756 ORTHO05D009403 2.9e-07 58.2 41 70.7
Gohir.A10G019600 Gossypium hirsutum HOM05D007756 ORTHO05D009403 3.8e-07 57.8 52 61.5
Rhsim02G0120600 Rhododendron simsii HOM05D032808 ORTHO05D009403 3.8e-07 57.8 44 77.3
Cfa000371 Carpinus fangiana HOM05D007756 ORTHO05D009403 6.5e-07 57.0 48 66.7
CiPaw.10G120500 Carya illinoinensis HOM05D007756 ORTHO05D009403 6.5e-07 57.0 54 63.0
Hma1.2p1_0144F.1_g064970 Hydrangea macrophylla HOM05D007756 ORTHO05D009403 1.1e-06 56.2 63 52.4
Manes.16G038800 Manihot esculenta HOM05D007756 ORTHO05D009403 1.1e-06 56.2 47 63.8
Hma1.2p1_0144F.1_g064960 Hydrangea macrophylla HOM05D007756 ORTHO05D009403 1.4e-06 55.8 58 55.2
Nitab4.5_0001170g0030 Nicotiana tabacum HOM05D007756 ORTHO05D009403 1.4e-06 55.8 43 65.1
Ciclev10017421m.g Citrus clementina HOM05D007756 ORTHO05D009403 1.9e-06 55.5 61 54.1
Gohir.A05G164200 Gossypium hirsutum HOM05D007756 ORTHO05D009403 1.9e-06 55.5 47 57.4
Gohir.A10G019400 Gossypium hirsutum HOM05D007756 ORTHO05D009403 1.9e-06 55.5 48 62.5
Gorai.009G172100 Gossypium raimondii HOM05D007756 ORTHO05D009403 1.9e-06 55.5 47 57.4
TAR679G0001 Trochodendron aralioides HOM05D007756 ORTHO05D009403 2.5e-06 55.1 57 52.6
VMungo0251G2707 Vigna mungo HOM05D007756 ORTHO05D009403 2.5e-06 55.1 48 64.6
Manes.16G022400 Manihot esculenta HOM05D007756 ORTHO05D009403 3.2e-06 54.7 50 58.0
Thecc.06G196200 Theobroma cacao HOM05D007756 ORTHO05D009403 4.2e-06 54.3 47 59.6
Gohir.D06G128600 Gossypium hirsutum HOM05D007756 ORTHO05D009403 5.5e-06 53.9 51 56.9
Manes.17G040600 Manihot esculenta HOM05D007756 ORTHO05D009403 9.3e-06 53.1 47 61.7
Phvul.002G223500 Phaseolus vulgaris HOM05D007756 ORTHO05D009403 9.3e-06 53.1 48 60.4


User provided reference genes

Program Settings