Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.1e-86 323.2 157 100.0
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 7.3e-86 320.5 157 98.7
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 2.0e-67 259.2 158 77.2
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 4.5e-67 258.1 158 78.5
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 1.7e-66 256.1 158 79.7
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 7.1e-65 250.8 158 75.9
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 2.3e-63 245.7 158 75.3
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 1.1e-62 243.4 158 72.8
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 1.5e-62 243.0 156 73.1
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 3.3e-62 241.9 159 74.2
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 2.1e-61 239.2 158 72.2
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 3.7e-61 238.4 156 71.8
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 1.4e-60 236.5 158 73.4
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 1.8e-60 236.1 156 73.7
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 4.1e-60 235.0 158 70.3
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 4.1e-60 235.0 156 72.4
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 5.3e-60 234.6 158 69.6
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 6.9e-60 234.2 159 73.6
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 9.0e-60 233.8 157 72.6
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 5.9e-59 231.1 158 72.8
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 5.9e-59 231.1 157 72.6
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.0e-58 230.3 156 71.2
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 1.0e-58 230.3 156 71.2
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 1.0e-58 230.3 158 70.9
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 1.3e-58 229.9 158 68.4
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 1.7e-58 229.6 159 71.7
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 1.7e-58 229.6 156 71.8
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 3.8e-58 228.4 158 70.9
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 5.0e-58 228.0 162 72.2
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 6.5e-58 227.6 158 67.1
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 6.5e-58 227.6 156 70.5
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 6.5e-58 227.6 156 71.2
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 1.1e-57 226.9 157 66.2
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 1.4e-57 226.5 158 70.9
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.4e-57 226.5 158 70.3
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 1.4e-57 226.5 131 80.9
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 3.2e-57 225.3 157 66.9
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 3.2e-57 225.3 156 69.9
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 4.2e-57 224.9 158 69.6
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 5.5e-57 224.6 158 67.7
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 5.5e-57 224.6 158 67.7
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 7.2e-57 224.2 158 67.1
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 9.3e-57 223.8 158 69.0
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 1.2e-56 223.4 158 68.4
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 2.1e-56 222.6 156 69.2
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 2.1e-56 222.6 157 70.7
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 3.6e-56 221.9 157 66.2
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 6.1e-56 221.1 156 67.3
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 7.9e-56 220.7 158 65.8
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 1.3e-55 219.9 156 68.6
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 5.1e-55 218.0 158 68.4
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 1.1e-54 216.9 158 66.5
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 1.5e-54 216.5 156 67.3
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 1.5e-54 216.5 159 69.2
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 1.5e-54 216.5 156 66.7
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 1.5e-54 216.5 158 65.8
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 1.9e-54 216.1 158 65.8
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 2.5e-54 215.7 156 66.7
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 4.3e-54 214.9 158 63.3
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 5.7e-54 214.5 158 67.1
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 9.7e-54 213.8 156 64.7
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 9.7e-54 213.8 156 66.7
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 9.7e-54 213.8 156 67.3
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 1.6e-53 213.0 158 66.5
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 1.6e-53 213.0 158 65.8
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 2.2e-53 212.6 160 67.5
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 8.2e-53 210.7 157 64.3
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 1.1e-52 210.3 155 63.9
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 1.4e-52 209.9 156 63.5
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 1.4e-52 209.9 158 63.9
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 1.8e-52 209.5 159 65.4
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 1.8e-52 209.5 159 65.4
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 2.4e-52 209.1 158 65.8
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 2.4e-52 209.1 158 63.9
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 3.1e-52 208.8 159 65.4
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 3.1e-52 208.8 156 63.5
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 4.1e-52 208.4 158 64.6
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 4.1e-52 208.4 160 66.2
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 1.2e-51 206.8 159 64.8
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 1.2e-51 206.8 159 64.8
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 5.9e-51 204.5 158 64.6
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 5.0e-50 201.4 158 63.9
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 8.5e-50 200.7 156 62.8
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 2.5e-49 199.1 158 60.1
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 3.2e-49 198.7 158 60.1
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 4.2e-49 198.4 158 58.2
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 5.5e-49 198.0 158 62.0
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 1.0e-47 193.7 157 58.6
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 8.8e-47 190.7 134 68.7
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 2.0e-38 162.9 124 63.7
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 8.8e-31 137.5 92 72.8
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 2.2e-29 132.9 136 53.7
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 1.8e-28 129.8 159 44.7
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 6.8e-15 84.7 158 34.2
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 5.0e-10 68.6 72 41.7
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 2.5e-09 66.2 54 64.8
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 6.8e-07 58.2 134 33.6
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 1.2e-06 57.4 36 75.0
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 4.4e-06 55.5 36 66.7


User provided reference genes

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