Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020520 Camellia sinensis var. sinensis HOM05D006836 ORTHO05D008691 7.2e-195 683.7 342 100.0
Dinv21313 Davidia involucrata HOM05D006836 ORTHO05D008691 3.2e-150 535.4 349 78.5
Rhsim06G0178100 Rhododendron simsii HOM05D006836 ORTHO05D008691 1.9e-142 509.6 343 76.1
vmacro12068 Vaccinium macrocarpon HOM05D006836 ORTHO05D008691 1.3e-140 503.4 349 75.1
Actinidia09801 Actinidia chinensis HOM05D006836 ORTHO05D008691 8.6e-140 500.7 350 74.3
QL04p067653 Quercus lobata HOM05D006836 ORTHO05D008691 9.9e-128 460.7 350 66.9
TAR629G0496 Trochodendron aralioides HOM05D006836 ORTHO05D008691 1.3e-127 460.3 362 65.2
GSVIVG01030118001 Vitis vinifera HOM05D006836 ORTHO05D008691 3.5e-125 452.2 351 66.1
CiPaw.03G283000 Carya illinoinensis HOM05D006836 ORTHO05D008691 4.6e-125 451.8 350 64.6
Manes.13G060700 Manihot esculenta HOM05D006836 ORTHO05D008691 2.3e-124 449.5 355 64.2
Duzib133G0147 Durio zibethinus HOM05D006836 ORTHO05D008691 8.7e-124 447.6 352 64.8
Thecc.01G198300 Theobroma cacao HOM05D006836 ORTHO05D008691 9.6e-123 444.1 349 64.2
Gohir.A07G192900 Gossypium hirsutum HOM05D006836 ORTHO05D008691 8.1e-122 441.0 349 63.3
Gohir.D07G199300 Gossypium hirsutum HOM05D006836 ORTHO05D008691 1.5e-120 436.8 349 62.2
Gorai.001G223100 Gossypium raimondii HOM05D006836 ORTHO05D008691 1.5e-120 436.8 349 63.3
Potri.014G169200 Populus trichocarpa HOM05D006836 ORTHO05D008691 1.5e-120 436.8 350 64.6
Nitab4.5_0004852g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 4.5e-120 435.3 350 64.3
Cfa014210 Carpinus fangiana HOM05D006836 ORTHO05D008691 1.7e-119 433.3 367 62.7
Ciclev10015848m.g Citrus clementina HOM05D006836 ORTHO05D008691 6.4e-119 431.4 353 63.5
RcHm_v2.0_Chr2g0155731 Rosa chinensis HOM05D006836 ORTHO05D008691 1.4e-118 430.3 354 63.6
DCAR_012739 Daucus carota HOM05D006836 ORTHO05D008691 1.9e-118 429.9 247 80.2
Solyc07g045300.4 Solanum lycopersicum HOM05D006836 ORTHO05D008691 1.0e-116 424.1 355 63.9
MD09G1129600 Malus domestica HOM05D006836 ORTHO05D008691 1.3e-116 423.7 348 61.8
CANSAT64G2876 Cannabis sativa HOM05D006836 ORTHO05D008691 5.1e-116 421.8 351 61.5
Lalb_Chr10g0094621 Lupinus albus HOM05D006836 ORTHO05D008691 7.4e-115 417.9 349 62.5
Phvul.L001691 Phaseolus vulgaris HOM05D006836 ORTHO05D008691 1.6e-114 416.8 337 63.8
Haze_12601 Corylus avellana HOM05D006836 ORTHO05D008691 2.8e-114 416.0 396 58.1
PSO541G5262 Papaver somniferum HOM05D006836 ORTHO05D008691 4.8e-114 415.2 366 58.7
PSO675G1370 Papaver somniferum HOM05D006836 ORTHO05D008691 4.8e-114 415.2 366 59.3
PGSC0003DMG400017381 Solanum tuberosum HOM05D006836 ORTHO05D008691 1.4e-113 413.7 251 76.9
Sopen07g023830 Solanum pennellii HOM05D006836 ORTHO05D008691 2.4e-113 412.9 265 72.8
Nn1g07540 Nelumbo nucifera HOM05D006836 ORTHO05D008691 3.1e-113 412.5 356 59.6
MBI14_g24036_MAGBIO Magnolia biondii HOM05D006836 ORTHO05D008691 2.0e-112 409.8 326 64.7
VMungo0647G0281 Vigna mungo HOM05D006836 ORTHO05D008691 3.4e-112 409.1 337 63.5
Aqoxy1G03080 Aquilegia oxysepala HOM05D006836 ORTHO05D008691 5.8e-112 408.3 305 65.9
arahy.Tifrunner.gnm1.ann1.GSTV0Y Arachis hypogaea HOM05D006836 ORTHO05D008691 9.9e-112 407.5 341 62.8
arahy.Tifrunner.gnm1.ann1.M09JG2 Arachis hypogaea HOM05D006836 ORTHO05D008691 6.4e-111 404.8 346 62.1
Lj6g0007987 Lotus japonicus HOM05D006836 ORTHO05D008691 4.2e-110 402.1 237 77.6
Glyma.13G010200 Glycine max HOM05D006836 ORTHO05D008691 9.3e-110 401.0 254 75.2
TWI75G1319 Tripterygium wilfordii HOM05D006836 ORTHO05D008691 2.1e-109 399.8 348 58.6
Glyma.20G060000 Glycine max HOM05D006836 ORTHO05D008691 3.5e-109 399.1 335 62.7
Oeu037218.2 Olea europaea HOM05D000879 ORTHO05D008691 3.5e-109 399.1 297 66.0
Sabra14G0129000 Salix brachista HOM05D006836 ORTHO05D008691 7.9e-109 397.9 438 52.3
PGR031G1777 Punica granatum HOM05D006836 ORTHO05D008691 5.1e-108 395.2 349 58.5
Eucgr.K01397 Eucalyptus grandis HOM05D006836 ORTHO05D008691 1.9e-107 393.3 324 62.3
AUR62014994 Chenopodium quinoa HOM05D006836 ORTHO05D008691 3.3e-107 392.5 341 61.0
Zm00001eb176810 Zea mays HOM05D006836 ORTHO05D008691 7.4e-107 391.3 289 66.4
TPR.G16170 Trifolium pratense HOM05D006836 ORTHO05D008691 1.6e-106 390.2 338 59.5
ClCG02G009110 Citrullus lanatus HOM05D006836 ORTHO05D008691 2.8e-106 389.4 316 62.3
Nitab4.5_0005354g0030 Nicotiana tabacum HOM05D006836 ORTHO05D008691 1.4e-105 387.1 350 59.7
Hund15463 Selenicereus undatus HOM05D006836 ORTHO05D008691 1.4e-105 387.1 352 58.2
Psat5g104760 Pisum sativum HOM05D006836 ORTHO05D008691 6.9e-105 384.8 345 59.7
Ca_16339_v3 Cicer arietinum L. HOM05D006836 ORTHO05D008691 1.2e-104 384.0 347 59.9
THA.LOC104808842 Tarenaya hassleriana HOM05D006836 ORTHO05D008691 4.9e-103 378.6 359 54.6
FvH4_6g40480 Fragaria vesca HOM05D006836 ORTHO05D008691 1.9e-102 376.7 304 63.2
Os08g0345400 Oryza sativa ssp. japonica HOM05D006836 ORTHO05D008691 1.9e-102 376.7 235 72.8
Migut.M00056 Erythranthe guttata HOM05D006836 ORTHO05D008691 4.2e-102 375.6 346 58.1
EL10Ac9g22661 Beta vulgaris HOM05D006836 ORTHO05D008691 1.2e-101 374.0 344 58.4
Medtr3g082680 Medicago truncatula HOM05D006836 ORTHO05D008691 1.6e-101 373.6 229 76.4
Sp3g23200 Schrenkiella parvula HOM05D006836 ORTHO05D008691 1.6e-101 373.6 350 54.6
SGA_v2.0_scaffold73G24492 Striga asiatica HOM05D006836 ORTHO05D008691 2.1e-101 373.2 235 71.9
Peaxi162Scf00612g00142 Petunia axillaris HOM05D006836 ORTHO05D008691 3.5e-101 372.5 341 58.7
MSTRG.14912 Avicennia marina HOM05D006836 ORTHO05D008691 3.0e-100 369.4 342 57.0
BcaC06g35865 Brassica carinata HOM05D006836 ORTHO05D008691 3.0e-100 369.4 341 55.7
BolC7t41479H Brassica oleracea HOM05D006836 ORTHO05D008691 3.0e-100 369.4 341 55.7
Thhalv10002607m.g Eutrema salsugineum HOM05D006836 ORTHO05D008691 3.9e-100 369.0 352 55.7
Sed0023251 Sechium edule HOM05D006836 ORTHO05D008691 5.1e-100 368.6 324 58.0
AL3G42030 Arabidopsis lyrata HOM05D006836 ORTHO05D008691 6.7e-100 368.2 355 54.4
C07p10290 Brassica napus HOM05D006836 ORTHO05D008691 6.7e-100 368.2 341 55.7
Carub.0003s2604 Capsella rubella HOM05D006836 ORTHO05D008691 6.7e-100 368.2 349 55.0
BcaB06g26781 Brassica carinata HOM05D006836 ORTHO05D008691 1.1e-99 367.5 352 54.3
COL.COLO4_19642 Corchorus olitorius HOM05D006836 ORTHO05D008691 4.3e-99 365.5 353 55.2
BraA07t28465Z Brassica rapa HOM05D006836 ORTHO05D008691 5.7e-99 365.2 337 55.5
SEGI_40154 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 7.4e-99 364.8 236 69.5
CARHR102220 Cardamine hirsuta HOM05D006836 ORTHO05D008691 1.6e-98 363.6 349 54.2
ATR0751G245 Amborella trichopoda HOM05D006836 ORTHO05D008691 6.3e-98 361.7 221 74.2
FAN10G4054 Fragaria x ananassa HOM05D006836 ORTHO05D008691 6.3e-98 361.7 370 53.8
FAN14G0130 Fragaria x ananassa HOM05D006836 ORTHO05D008691 6.3e-98 361.7 370 53.8
A07p06710 Brassica napus HOM05D006836 ORTHO05D008691 1.1e-97 360.9 337 54.9
Cc00_g01020 Coffea canephora HOM05D006836 ORTHO05D008691 5.3e-97 358.6 238 69.7
Ah.01g002500 Amaranthus hybridus HOM05D006836 ORTHO05D008691 3.4e-96 355.9 218 75.2
Lsat_1_v5_gn_7_97361 Lactuca sativa HOM05D006836 ORTHO05D008691 8.5e-95 351.3 351 55.6
AUR62029127 Chenopodium quinoa HOM05D006836 ORTHO05D008691 9.3e-94 347.8 220 73.6
Lj8A137G50 Lonicera japonica HOM05D006836 ORTHO05D008691 7.9e-93 344.7 210 76.7
HanXRQChr11g0329431 Helianthus annuus HOM05D006836 ORTHO05D008691 5.7e-91 338.6 331 55.0
CsaV3_6G009720 Cucumis sativus L. HOM05D006836 ORTHO05D008691 6.7e-84 315.1 252 61.9
ECA236G0162 Erigeron canadensis HOM05D006836 ORTHO05D008691 2.8e-82 309.7 198 73.7
CDE10G1136 Ceratophyllum demersum HOM05D006836 ORTHO05D008691 4.5e-80 302.4 174 77.6
Cpa.g.sc136.39 Carica papaya HOM05D006836 ORTHO05D008691 7.7e-80 301.6 353 49.6
unitig_62.g23534 Utricularia gibba HOM05D000211 ORTHO05D002682 2.2e-79 300.1 309 51.8
Sc21g0000470 Simmondsia chinensis HOM05D006836 ORTHO05D008691 2.0e-75 287.0 280 55.0
MELO3C025942.2 Cucumis melo HOM05D006836 ORTHO05D008691 4.8e-74 282.3 283 55.5
Prupe.3G195700 Prunus persica HOM05D006836 ORTHO05D008691 1.1e-73 281.2 250 61.2
FAN02G3194 Fragaria x ananassa HOM05D006836 ORTHO05D008691 3.1e-73 279.6 249 58.6
Pp3c23_16310 Physcomitrium patens HOM05D006836 ORTHO05D008691 5.5e-70 268.9 221 55.7
AT2G04360 Arabidopsis thaliana HOM05D006836 ORTHO05D008691 3.6e-69 266.2 289 50.2
AagrBONN_evm.TU.Sc2ySwM_117.1494 Anthoceros agrestis HOM05D006836 ORTHO05D008691 1.4e-68 264.2 223 55.6
MD07G1016400 Malus domestica HOM05D006836 ORTHO05D008691 1.4e-68 264.2 263 53.6
Mapoly0098s0007 Marchantia polymorpha HOM05D006836 ORTHO05D008691 8.8e-68 261.5 226 56.6
MD17G1118400 Malus domestica HOM05D006836 ORTHO05D008691 2.6e-67 260.0 234 57.7
Haze_12612 Corylus avellana HOM05D006836 ORTHO05D008691 8.2e-66 255.0 263 55.9
Aa31sc202G50 Aethionema arabicum HOM05D006836 ORTHO05D008691 7.0e-65 251.9 304 46.4
SMO270G0068 Selaginella moellendorffii HOM05D006836 ORTHO05D008691 7.0e-65 251.9 283 45.2
Cre05.g234750 Chlamydomonas reinhardtii HOM05D006836 ORTHO05D008691 3.1e-49 199.9 239 43.5
CBR_g3513 Chara braunii HOM05D006836 ORTHO05D000407 4.9e-42 176.0 214 43.5
FAN05G5431 Fragaria x ananassa HOM05D006836 ORTHO05D008691 6.6e-39 165.6 108 71.3
FAN09G0369 Fragaria x ananassa HOM05D006836 ORTHO05D008691 1.2e-37 161.4 108 70.4
HPP92_003030 Vanilla planifolia HOM05D006836 ORTHO05D008691 4.0e-36 156.4 222 41.4
SEGI_21977 Sequoiadendron giganteum HOM05D006836 ORTHO05D008691 3.5e-32 143.3 87 73.6
HPP92_003031 Vanilla planifolia HOM05D006836 ORTHO05D008691 6.0e-32 142.5 97 64.9
Hma1.2p1_0599F.1_g187040 Hydrangea macrophylla HOM05D006836 ORTHO05D008691 2.3e-23 114.0 138 52.9
PRCOL_00003549 Prasinoderma coloniale HOM05D006836 ORTHO05D008691 2.9e-18 97.1 167 38.3
arahy.Tifrunner.gnm1.ann1.FY93PX Arachis hypogaea HOM05D006836 ORTHO05D000230 3.3e-14 83.6 47 78.7
Haze_12595 Corylus avellana HOM05D006836 ORTHO05D008691 5.3e-12 76.3 47 70.2
MCO08G347 Micromonas commoda HOM05D006836 ORTHO05D008691 5.3e-12 76.3 241 30.3
Mapoly0098s0053 Marchantia polymorpha HOM05D001007 ORTHO05D008005 7.1e-09 65.9 95 38.9
Oeu037216.1 Olea europaea HOM05D006836 ORTHO05D049434 8.7e-07 58.9 142 32.4
Oeu037217.1 Olea europaea HOM05D006836 ORTHO05D049434 1.1e-06 58.5 142 33.1


User provided reference genes

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