Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020508 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 3.6e-48 194.5 92 100.0
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.2e-43 179.5 91 93.4
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 3.4e-43 177.9 91 90.1
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 3.4e-43 177.9 91 89.0
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 7.7e-43 176.8 91 91.2
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 7.7e-43 176.8 91 91.2
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 2.9e-42 174.9 89 88.8
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 2.9e-42 174.9 89 88.8
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 3.8e-42 174.5 91 87.9
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.1e-41 172.9 91 86.8
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 9.4e-41 169.9 91 85.7
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 1.2e-40 169.5 91 87.9
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 6.1e-40 167.2 91 83.5
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 6.1e-40 167.2 91 83.5
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 1.0e-39 166.4 91 81.3
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 1.0e-39 166.4 91 82.4
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 1.0e-39 166.4 91 81.3
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 1.0e-39 166.4 91 81.3
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 1.4e-39 166.0 91 83.5
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 1.4e-39 166.0 91 83.5
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 1.4e-39 166.0 91 82.4
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 1.4e-39 166.0 91 82.4
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.8e-39 165.6 91 81.3
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 1.8e-39 165.6 91 81.3
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 1.8e-39 165.6 91 82.4
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 2.3e-39 165.2 91 80.2
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 2.3e-39 165.2 91 83.5
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 3.0e-39 164.9 91 83.5
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 3.9e-39 164.5 91 80.2
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 3.9e-39 164.5 91 81.3
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 3.9e-39 164.5 91 81.3
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 5.2e-39 164.1 85 87.1
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 6.7e-39 163.7 91 78.0
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 6.7e-39 163.7 91 80.2
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 6.7e-39 163.7 91 80.2
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 6.7e-39 163.7 91 83.5
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 8.8e-39 163.3 91 81.3
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 1.1e-38 162.9 91 80.2
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 1.5e-38 162.5 91 83.5
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 1.5e-38 162.5 91 83.5
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 1.5e-38 162.5 91 80.2
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 2.0e-38 162.2 91 79.1
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 2.0e-38 162.2 91 80.2
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 3.3e-38 161.4 91 81.3
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 3.3e-38 161.4 91 79.1
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 3.3e-38 161.4 91 80.2
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 3.3e-38 161.4 91 79.1
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 3.3e-38 161.4 91 78.0
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 3.3e-38 161.4 91 79.1
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 4.4e-38 161.0 91 78.0
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 4.4e-38 161.0 91 78.0
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 4.4e-38 161.0 91 78.0
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 4.4e-38 161.0 91 78.0
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 4.4e-38 161.0 91 78.0
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 4.4e-38 161.0 91 81.3
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 4.4e-38 161.0 91 78.0
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 5.7e-38 160.6 91 79.1
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 7.4e-38 160.2 91 78.0
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 7.4e-38 160.2 86 81.4
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 7.4e-38 160.2 91 78.0
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 9.7e-38 159.8 91 79.1
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 9.7e-38 159.8 91 79.1
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 9.7e-38 159.8 91 79.1
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 1.7e-37 159.1 87 82.8
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 1.7e-37 159.1 91 76.9
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 2.2e-37 158.7 91 78.0
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 2.2e-37 158.7 81 86.4
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 3.7e-37 157.9 87 81.6
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 3.7e-37 157.9 91 80.2
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 4.8e-37 157.5 91 79.1
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 8.2e-37 156.8 91 76.9
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 8.2e-37 156.8 91 76.9
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.1e-36 156.4 85 82.4
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 1.1e-36 156.4 88 78.4
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 1.4e-36 156.0 92 80.4
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 1.8e-36 155.6 89 77.5
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 2.4e-36 155.2 85 81.2
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 2.4e-36 155.2 91 75.8
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 2.4e-36 155.2 91 75.8
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 4.1e-36 154.5 91 75.8
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 5.3e-36 154.1 91 75.8
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 9.1e-36 153.3 90 72.2
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 1.6e-35 152.5 91 76.9
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 2.0e-35 152.1 91 73.6
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 2.0e-35 152.1 91 76.9
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 2.0e-35 152.1 91 74.7
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 2.6e-35 151.8 91 76.9
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 2.6e-35 151.8 91 76.9
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 2.6e-35 151.8 91 75.8
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 3.5e-35 151.4 85 78.8
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 2.5e-33 145.2 91 72.5
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 2.1e-32 142.1 93 67.7
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 1.8e-31 139.0 92 71.7
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 3.0e-31 138.3 93 66.7
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 2.0e-30 135.6 83 74.7
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 2.6e-30 135.2 93 64.5
Thhalv10022385m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 7.5e-30 133.7 73 80.8
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 2.8e-29 131.7 93 63.4
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 4.1e-28 127.9 91 60.4
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 4.1e-28 127.9 91 60.4
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 1.6e-24 115.9 67 80.6
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 1.8e-23 112.5 85 57.6
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 6.3e-21 104.0 88 51.1
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 1.1e-20 103.2 86 50.0
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 2.0e-19 99.0 53 84.9
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 5.9e-19 97.4 53 79.2
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 7.7e-19 97.1 62 74.2
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 1.0e-18 96.7 53 77.4
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 1.7e-18 95.9 82 53.7
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 1.2e-14 83.2 94 40.4
MBI05_g43358_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 2.0e-14 82.4 43 88.4
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 2.6e-14 82.0 76 47.4
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 9.2e-12 73.6 90 35.6
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 1.3e-10 69.7 35 82.9
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 2.3e-07 58.9 36 66.7
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 3.4e-06 55.1 69 31.9


User provided reference genes

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