Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0020487 Camellia sinensis var. sinensis HOM05D007399 ORTHO05D009341 1.8e-75 285.8 139 100.0
Dinv19187 Davidia involucrata HOM05D007399 ORTHO05D009341 3.3e-37 158.7 101 75.2
Cc01_g16850 Coffea canephora HOM05D007399 ORTHO05D009341 4.3e-37 158.3 104 74.0
Nn1g07919 Nelumbo nucifera HOM05D007399 ORTHO05D009341 1.8e-35 152.9 100 75.0
Rhsim01G0254900 Rhododendron simsii HOM05D007399 ORTHO05D009341 1.8e-35 152.9 104 71.2
Manes.13G046300 Manihot esculenta HOM05D007399 ORTHO05D009341 4.0e-35 151.8 104 71.2
Oeu037382.1 Olea europaea HOM05D007399 ORTHO05D009341 1.2e-34 150.2 103 70.9
Actinidia09475 Actinidia chinensis HOM05D007399 ORTHO05D009341 1.5e-34 149.8 101 71.3
Peaxi162Scf00398g00810 Petunia axillaris HOM05D007399 ORTHO05D009341 3.4e-34 148.7 101 71.3
Oeu037384.1 Olea europaea HOM05D007399 ORTHO05D009341 9.8e-34 147.1 103 68.0
Thecc.01G222700 Theobroma cacao HOM05D007399 ORTHO05D009341 1.3e-33 146.7 104 67.3
Nitab4.5_0000345g0070 Nicotiana tabacum HOM05D007399 ORTHO05D009341 1.7e-33 146.4 105 69.5
Prupe.8G200700 Prunus persica HOM05D007399 ORTHO05D009341 2.9e-33 145.6 104 66.3
TAR362G0473 Trochodendron aralioides HOM05D007399 ORTHO05D009341 6.4e-33 144.4 107 67.3
Duzib133G1013 Durio zibethinus HOM05D007399 ORTHO05D009341 1.4e-32 143.3 104 66.3
Sabra02G0185900 Salix brachista HOM05D007399 ORTHO05D009341 2.4e-32 142.5 104 68.3
QL09p052198 Quercus lobata HOM05D007399 ORTHO05D009341 3.2e-32 142.1 100 70.0
QL09p053062 Quercus lobata HOM05D007399 ORTHO05D009341 3.2e-32 142.1 100 70.0
Lsat_1_v5_gn_5_180581 Lactuca sativa HOM05D007399 ORTHO05D009341 4.1e-32 141.7 133 57.9
GSVIVG01003279001 Vitis vinifera HOM05D007399 ORTHO05D009341 4.1e-32 141.7 101 67.3
Haze_24850 Corylus avellana HOM05D007399 ORTHO05D009341 7.1e-32 141.0 99 71.7
Nitab4.5_0000045g0320 Nicotiana tabacum HOM05D007399 ORTHO05D009341 7.1e-32 141.0 100 68.0
Potri.002G244400 Populus trichocarpa HOM05D007399 ORTHO05D009341 1.2e-31 140.2 104 67.3
Phvul.010G020400 Phaseolus vulgaris HOM05D007399 ORTHO05D009341 1.6e-31 139.8 105 67.6
TWI18G0746 Tripterygium wilfordii HOM05D007399 ORTHO05D009341 3.5e-31 138.7 103 66.0
AT3G07150 Arabidopsis thaliana HOM05D007399 ORTHO05D009341 4.6e-31 138.3 120 55.0
PGSC0003DMG401023104 Solanum tuberosum HOM05D007399 ORTHO05D009341 7.8e-31 137.5 105 67.6
CAN.G3.2 Capsicum annuum HOM05D007399 ORTHO05D009341 1.7e-30 136.3 97 71.1
Ciclev10022115m.g Citrus clementina HOM05D007399 ORTHO05D009341 2.3e-30 136.0 98 64.3
Thhalv10022223m.g Eutrema salsugineum HOM05D007399 ORTHO05D009341 2.3e-30 136.0 120 55.0
CiPaw.03G147600 Carya illinoinensis HOM05D007399 ORTHO05D009341 3.0e-30 135.6 102 64.7
VMungo0331G1622 Vigna mungo HOM05D007399 ORTHO05D009341 3.0e-30 135.6 99 67.7
Ah.08g214480 Amaranthus hybridus HOM05D007399 ORTHO05D009341 3.9e-30 135.2 103 62.1
AL3G18400 Arabidopsis lyrata HOM05D007399 ORTHO05D009341 3.9e-30 135.2 104 60.6
ECA248G2789 Erigeron canadensis HOM05D007399 ORTHO05D009341 3.9e-30 135.2 97 70.1
Atru.chr6.1505 Acer truncatum HOM05D007399 ORTHO05D009341 8.6e-30 134.0 100 63.0
Carub.0003s0667 Capsella rubella HOM05D007399 ORTHO05D009341 8.6e-30 134.0 104 59.6
Lalb_Chr12g0209951 Lupinus albus HOM05D007399 ORTHO05D009341 8.6e-30 134.0 104 60.6
COL.COLO4_15647 Corchorus olitorius HOM05D007399 ORTHO05D009341 1.5e-29 133.3 105 66.7
Hund05568 Selenicereus undatus HOM05D007399 ORTHO05D009341 1.5e-29 133.3 97 66.0
CARHR081750 Cardamine hirsuta HOM05D007399 ORTHO05D009341 3.3e-29 132.1 104 56.7
HanXRQChr01g0015211 Helianthus annuus HOM05D007399 ORTHO05D009341 3.3e-29 132.1 98 68.4
arahy.Tifrunner.gnm1.ann1.YE6SLX Arachis hypogaea HOM05D007399 ORTHO05D009341 4.3e-29 131.7 97 63.9
Glyma.16G101000 Glycine max HOM05D007399 ORTHO05D009341 4.3e-29 131.7 105 61.9
Aa31LG5G17710 Aethionema arabicum HOM05D007399 ORTHO05D009341 5.6e-29 131.3 135 50.4
DCAR_000523 Daucus carota HOM05D007399 ORTHO05D009341 7.3e-29 131.0 96 63.5
Cfa002599 Carpinus fangiana HOM05D007399 ORTHO05D009341 9.5e-29 130.6 94 71.3
Sopen09g023130 Solanum pennellii HOM05D007399 ORTHO05D009341 9.5e-29 130.6 145 51.7
Gohir.A11G139200 Gossypium hirsutum HOM05D007399 ORTHO05D009341 1.2e-28 130.2 101 61.4
RcHm_v2.0_Chr6g0284361 Rosa chinensis HOM05D007399 ORTHO05D009341 1.2e-28 130.2 99 64.6
Lj2A1128G40 Lonicera japonica HOM05D007399 ORTHO05D009341 1.6e-28 129.8 79 77.2
arahy.Tifrunner.gnm1.ann1.5JJB2W Arachis hypogaea HOM05D007399 ORTHO05D009341 2.1e-28 129.4 97 62.9
FAN15G3119 Fragaria x ananassa HOM05D007399 ORTHO05D009341 3.6e-28 128.6 99 62.6
QL09p053453 Quercus lobata HOM05D007399 ORTHO05D009341 3.6e-28 128.6 100 65.0
Solyc09g059950.3 Solanum lycopersicum HOM05D007399 ORTHO05D009341 4.7e-28 128.3 145 51.0
Lj3g0000647 Lotus japonicus HOM05D007399 ORTHO05D009341 6.2e-28 127.9 100 61.0
Cpa.g.sc8.134 Carica papaya HOM05D007399 ORTHO05D009341 8.1e-28 127.5 104 58.7
AUR62001112 Chenopodium quinoa HOM05D007399 ORTHO05D009341 8.1e-28 127.5 126 53.2
BcaC05g29751 Brassica carinata HOM05D007399 ORTHO05D009341 1.1e-27 127.1 135 48.1
PSO170G3887 Papaver somniferum HOM05D007399 ORTHO05D009341 1.1e-27 127.1 105 58.1
Sp3g06090 Schrenkiella parvula HOM05D007399 ORTHO05D009341 1.1e-27 127.1 143 46.9
Medtr8g013040 Medicago truncatula HOM05D007399 ORTHO05D009341 1.8e-27 126.3 94 67.0
PSO357G0666 Papaver somniferum HOM05D007399 ORTHO05D009341 3.1e-27 125.6 105 57.1
Migut.D02494 Erythranthe guttata HOM05D007399 ORTHO05D009341 4.0e-27 125.2 99 61.6
Gohir.D11G145400 Gossypium hirsutum HOM05D007399 ORTHO05D009341 4.0e-27 125.2 101 58.4
BraA05t22833Z Brassica rapa HOM05D007399 ORTHO05D009341 5.2e-27 124.8 104 57.7
THA.LOC104802666 Tarenaya hassleriana HOM05D007399 ORTHO05D009341 5.2e-27 124.8 137 48.9
Gorai.007G155900 Gossypium raimondii HOM05D007399 ORTHO05D009341 6.8e-27 124.4 101 58.4
FvH4_2g18740 Fragaria vesca HOM05D007399 ORTHO05D009341 8.9e-27 124.0 99 61.6
FAN24G1833 Fragaria x ananassa HOM05D007399 ORTHO05D009341 8.9e-27 124.0 99 61.6
MD05G1173200 Malus domestica HOM05D007399 ORTHO05D009341 8.9e-27 124.0 100 60.0
A05p41060 Brassica napus HOM05D007399 ORTHO05D009341 1.2e-26 123.6 104 56.7
C05p60230 Brassica napus HOM05D007399 ORTHO05D009341 1.5e-26 123.2 102 56.9
SHI28622 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-26 123.2 103 58.3
BcaC05g29843 Brassica carinata HOM05D007399 ORTHO05D009341 3.4e-26 122.1 102 56.9
BolC5t34673H Brassica oleracea HOM05D007399 ORTHO05D009341 3.4e-26 122.1 102 56.9
PGR083G1511 Punica granatum HOM05D007399 ORTHO05D009341 9.9e-26 120.6 97 59.8
ClCG09G008880 Citrullus lanatus HOM05D007399 ORTHO05D009341 2.9e-25 119.0 100 58.0
EL10Ac7g17870 Beta vulgaris HOM05D007399 ORTHO05D009341 3.7e-25 118.6 98 59.2
CDE06G2632 Ceratophyllum demersum HOM05D007399 ORTHO05D009341 8.4e-25 117.5 88 67.0
FAN27G2185 Fragaria x ananassa HOM05D007399 ORTHO05D009341 8.4e-25 117.5 99 58.6
AUR62008936 Chenopodium quinoa HOM05D007399 ORTHO05D009341 1.1e-24 117.1 79 70.9
Eucgr.H00781 Eucalyptus grandis HOM05D007399 ORTHO05D009341 4.1e-24 115.2 97 59.8
TPR.G17137 Trifolium pratense HOM05D007399 ORTHO05D009341 4.1e-24 115.2 97 58.8
CANSAT01G2134 Cannabis sativa HOM05D007399 ORTHO05D009341 9.2e-24 114.0 102 55.9
Sed0009642 Sechium edule HOM05D007399 ORTHO05D009341 9.2e-24 114.0 100 57.0
CANSAT01G0413 Cannabis sativa HOM05D007399 ORTHO05D009341 3.5e-23 112.1 102 54.9
CANSAT01G1231 Cannabis sativa HOM05D007399 ORTHO05D009341 3.5e-23 112.1 102 54.9
Psat4g199960 Pisum sativum HOM05D007399 ORTHO05D009341 4.6e-23 111.7 97 54.6
CANSAT01G2481 Cannabis sativa HOM05D007399 ORTHO05D009341 1.3e-22 110.2 101 54.5
CsaV3_7G026010 Cucumis sativus L. HOM05D007399 ORTHO05D009341 1.1e-21 107.1 101 55.4
MELO3C021053.2 Cucumis melo HOM05D007399 ORTHO05D009341 4.3e-21 105.1 101 55.4
Sc24g0003500 Simmondsia chinensis HOM05D007399 ORTHO05D009341 1.2e-20 103.6 80 63.8
Actinidia23717 Actinidia chinensis HOM05D007399 ORTHO05D009341 1.6e-20 103.2 101 57.4
SalBow6G3187 Salvia bowleyana HOM05D007399 ORTHO05D009341 2.8e-20 102.4 95 54.7
SalBow6G3685 Salvia bowleyana HOM05D007399 ORTHO05D009341 2.8e-20 102.4 95 54.7
Hund20426 Selenicereus undatus HOM05D007399 ORTHO05D009341 3.6e-20 102.1 79 63.3
SEGI_10803 Sequoiadendron giganteum HOM05D007399 ORTHO05D009341 2.4e-16 89.4 87 50.6
Os01g0918400 Oryza sativa ssp. japonica HOM05D007399 ORTHO05D009341 6.6e-14 81.3 89 43.8
ATR0609G108 Amborella trichopoda HOM05D007399 ORTHO05D009341 1.6e-12 76.6 65 55.4
HPP92_011779 Vanilla planifolia HOM05D007399 ORTHO05D009341 8.1e-12 74.3 95 38.9
Zm00001eb364650 Zea mays HOM05D007399 ORTHO05D009341 8.1e-12 74.3 93 41.9
Aqoxy5G00011 Aquilegia oxysepala HOM05D007399 ORTHO05D009341 1.4e-11 73.6 108 42.6


User provided reference genes

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